Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL034345.1-201ENST00000407768 123 ntBASIC0.27□□□□□ -2.37
H3F3AP84243 RNU6-387P-201ENST00000411331 105 ntBASIC0.27□□□□□ -2.37
H3F3AP84243 AC012306.1-201ENST00000423267 114 ntBASIC0.27□□□□□ -2.37
H3F3AP84243 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.27□□□□□ -2.37
H3F3AP84243 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.27□□□□□ -2.37
H3F3AP84243 AL031313.1-201ENST00000448435 256 ntBASIC0.27□□□□□ -2.37
H3F3AP84243 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
H3F3AP84243 AC079382.1-201ENST00000493346 557 ntBASIC0.27□□□□□ -2.37
H3F3AP84243 AC112204.1-201ENST00000502591 103 ntBASIC0.27□□□□□ -2.37
H3F3AP84243 AC008628.2-201ENST00000502605 298 ntBASIC0.27□□□□□ -2.37
H3F3AP84243 AC090049.2-201ENST00000550377 109 ntBASIC0.27□□□□□ -2.37
H3F3AP84243 AC097065.2-201ENST00000608159 533 ntBASIC0.27□□□□□ -2.37
H3F3AP84243 AC073349.3-201ENST00000617616 186 ntBASIC0.27□□□□□ -2.37
H3F3AP84243 AL359697.1-201ENST00000624879 587 ntBASIC0.27□□□□□ -2.37
H3F3AP84243 RNU6-199P-201ENST00000362954 107 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 RNY1-201ENST00000364228 113 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 Y_RNA.269-201ENST00000364685 89 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 RNU6-1303P-201ENST00000364841 107 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
H3F3AP84243 MIR598-201ENST00000384868 97 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 RNU6-440P-201ENST00000390882 105 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 RPS29P13-201ENST00000402041 169 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 RNU2-8P-201ENST00000410727 190 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 MTCO2P12-201ENST00000427426 682 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 AC245047.3-201ENST00000429428 127 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 RPL37P21-201ENST00000435890 276 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 AL031274.1-201ENST00000450334 232 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.26□□□□□ -2.37
H3F3AP84243 AC013470.1-201ENST00000453438 462 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.26□□□□□ -2.37
H3F3AP84243 AK3P2-201ENST00000507976 429 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 AC104136.1-201ENST00000512969 394 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.26□□□□□ -2.37
H3F3AP84243 AL391840.1-201ENST00000571144 367 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 AL357312.1-201ENST00000603879 298 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.26□□□□□ -2.37
H3F3AP84243 AC093913.1-201ENST00000614178 329 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.26□□□□□ -2.37
H3F3AP84243 AL445984.1-201ENST00000637834 659 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 MTND4P5-201ENST00000435821 1374 ntBASIC0.26□□□□□ -2.37
H3F3AP84243 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.26□□□□□ -2.37
H3F3AP84243 RNU4-1-201ENST00000363925 141 ntBASIC0.25□□□□□ -2.37
H3F3AP84243 Y_RNA.576-201ENST00000384781 102 ntBASIC0.25□□□□□ -2.37
H3F3AP84243 SNORA16.2-201ENST00000390991 127 ntBASIC0.25□□□□□ -2.37
H3F3AP84243 RNU1-119P-201ENST00000391122 165 ntBASIC0.25□□□□□ -2.37
H3F3AP84243 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.25□□□□□ -2.37
H3F3AP84243 AC005002.2-201ENST00000438228 269 ntBASIC0.25□□□□□ -2.37
H3F3AP84243 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.25□□□□□ -2.37
H3F3AP84243 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
H3F3AP84243 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.25□□□□□ -2.37
H3F3AP84243 SUB1P2-201ENST00000556401 297 ntBASIC0.25□□□□□ -2.37
H3F3AP84243 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.25□□□□□ -2.37
H3F3AP84243 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.25□□□□□ -2.37
H3F3AP84243 U6.108-201ENST00000637764 58 ntBASIC0.25□□□□□ -2.37
H3F3AP84243 Y_RNA.22-201ENST00000362492 102 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 RNU4-48P-201ENST00000365559 182 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 SNORD89-201ENST00000390981 114 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 MRPL42P2-201ENST00000403169 426 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 AL596276.1-201ENST00000434465 418 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.24□□□□□ -2.37
H3F3AP84243 NFU1P2-201ENST00000448700 469 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 SNORA70.12-201ENST00000516084 153 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 AC025627.3-201ENST00000582078 182 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 MIR5006-201ENST00000583027 110 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 AC091805.2-201ENST00000603848 235 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 MIR98-201ENST00000606724 119 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 AL031775.1-201ENST00000607014 887 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 AL359075.3-201ENST00000613288 217 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 AC005562.2-201ENST00000618264 111 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 7SK.10-201ENST00000621414 298 ntBASIC0.24□□□□□ -2.37
H3F3AP84243 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.24□□□□□ -2.37
H3F3AP84243 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.23□□□□□ -2.37
H3F3AP84243 RNU6-533P-201ENST00000384144 107 ntBASIC0.23□□□□□ -2.37
H3F3AP84243 MRPL42P3-201ENST00000401492 326 ntBASIC0.23□□□□□ -2.37
H3F3AP84243 CDK8P2-201ENST00000415020 547 ntBASIC0.23□□□□□ -2.37
H3F3AP84243 AL117339.3-201ENST00000418733 162 ntBASIC0.23□□□□□ -2.37
H3F3AP84243 RPS27AP14-201ENST00000422868 454 ntBASIC0.23□□□□□ -2.37
H3F3AP84243 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.23□□□□□ -2.37
H3F3AP84243 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.23□□□□□ -2.37
H3F3AP84243 AC074290.1-201ENST00000448883 135 ntBASIC0.23□□□□□ -2.37
H3F3AP84243 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.23□□□□□ -2.37
H3F3AP84243 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.23□□□□□ -2.37
H3F3AP84243 AC022493.2-201ENST00000506122 481 ntBASIC0.23□□□□□ -2.37
H3F3AP84243 RN7SKP12-201ENST00000516275 143 ntBASIC0.23□□□□□ -2.37
H3F3AP84243 RNU6-1178P-201ENST00000516674 107 ntBASIC0.23□□□□□ -2.37
H3F3AP84243 AC105185.1-201ENST00000518705 535 ntBASIC0.23□□□□□ -2.37
H3F3AP84243 AP003181.2-201ENST00000528941 181 ntBASIC0.23□□□□□ -2.37
H3F3AP84243 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.23□□□□□ -2.37
H3F3AP84243 AC103996.1-201ENST00000555468 102 ntBASIC0.23□□□□□ -2.37
H3F3AP84243 PRELID3BP2-201ENST00000605362 201 ntBASIC0.23□□□□□ -2.37
H3F3AP84243 SNORA43.4-201ENST00000629559 138 ntBASIC0.23□□□□□ -2.37
H3F3AP84243 AP000568.1-201ENST00000282964 442 ntBASIC0.22□□□□□ -2.37
H3F3AP84243 SNORA36.2-201ENST00000384004 127 ntBASIC0.22□□□□□ -2.37
H3F3AP84243 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
H3F3AP84243 RNU6-57P-201ENST00000411348 103 ntBASIC0.22□□□□□ -2.37
H3F3AP84243 MTND1P20-201ENST00000430341 950 ntBASIC0.22□□□□□ -2.37
H3F3AP84243 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.22□□□□□ -2.37
H3F3AP84243 AC004386.2-201ENST00000441858 148 ntBASIC0.22□□□□□ -2.37
H3F3AP84243 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.22□□□□□ -2.37
H3F3AP84243 AC022364.2-201ENST00000457963 554 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms