Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.04□□□□□ -2.4
ABCA4P78363 SNORA70.12-201ENST00000516084 153 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.04□□□□□ -2.4
ABCA4P78363 AC138869.1-201ENST00000568623 124 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 AL391840.1-201ENST00000571144 367 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 SNORA59B-202ENST00000578183 701 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 MTND1P15-201ENST00000579262 949 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 MIR4431-201ENST00000579990 94 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 AL929325.1-201ENST00000603096 117 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 AL451064.1-201ENST00000607718 471 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 AC063943.3-201ENST00000615562 356 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 AC073349.3-201ENST00000617616 186 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 Y_RNA.363-201ENST00000365529 113 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 RNU6-929P-201ENST00000384429 107 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 Y_RNA.551-201ENST00000384661 102 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 MIR938-201ENST00000401216 83 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 RNU6-1064P-201ENST00000410626 104 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 AC006366.1-201ENST00000422002 759 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 AC245047.3-201ENST00000429428 127 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.04□□□□□ -2.4
ABCA4P78363 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 AC245047.8-201ENST00000456455 284 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 U7.7-201ENST00000459276 60 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.04□□□□□ -2.4
ABCA4P78363 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
ABCA4P78363 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
ABCA4P78363 ADI1P3-201ENST00000549509 470 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 AP000811.1-201ENST00000603803 651 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 AC124016.2-201ENST00000610058 665 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 AC134026.1-201ENST00000623249 2239 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 RNU6-562P-201ENST00000362731 107 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 SNORD49B-201ENST00000365172 72 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 AL034345.1-201ENST00000407768 123 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 RNA5SP504-201ENST00000410676 117 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.03□□□□□ -2.4
ABCA4P78363 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.03□□□□□ -2.4
ABCA4P78363 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.03□□□□□ -2.4
ABCA4P78363 AC104982.1-201ENST00000478775 574 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 AC074198.2-201ENST00000508153 258 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 RNA5SP134-201ENST00000516492 96 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 AP003049.1-201ENST00000529418 457 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 Z98751.3-201ENST00000604447 521 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 U4.2-201ENST00000618561 85 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 AL513423.1-201ENST00000621695 132 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 MIR18A-201ENST00000362310 71 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 Y_RNA.330-201ENST00000365230 109 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 RNU6-609P-201ENST00000365459 107 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 SNORA32.2-201ENST00000384049 122 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 AC002429.1-201ENST00000437672 148 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.03□□□□□ -2.4
ABCA4P78363 AC073910.1-201ENST00000445047 438 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 AC010486.2-201ENST00000505572 483 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 RNU6-1041P-201ENST00000516254 102 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 AC011979.2-201ENST00000527568 352 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 AC026371.1-201ENST00000551867 419 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 AC090888.2-201ENST00000559765 1144 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.03□□□□□ -2.4
ABCA4P78363 AC099785.1-201ENST00000605697 437 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 AC092634.7-201ENST00000621022 103 ntBASIC0.03□□□□□ -2.4
ABCA4P78363 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.03□□□□□ -2.4
ABCA4P78363 MIR103A2-201ENST00000362154 78 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 Y_RNA.100-201ENST00000363141 102 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 RNU6-1141P-201ENST00000364520 107 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 Y_RNA.568-201ENST00000384742 113 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 RNU6-1031P-201ENST00000384773 107 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 MIR520G-201ENST00000385064 90 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 MIR520H-201ENST00000385126 88 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 RNU4-30P-201ENST00000410245 143 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 MTCYBP39-201ENST00000437562 491 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 DAP3P1-201ENST00000441522 278 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 MTCYBP42-201ENST00000444653 1130 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 RNU6-856P-201ENST00000516959 98 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 SCARNA16.5-201ENST00000517114 183 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.02□□□□□ -2.41
ABCA4P78363 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.02□□□□□ -2.41
ABCA4P78363 RPL17P51-201ENST00000605218 238 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 AC068880.4-201ENST00000623082 495 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 MIR4315-1-201ENST00000636800 73 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 U4.7-201ENST00000638126 106 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 MIR4315-2-201ENST00000640925 73 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 RNA5SP205-201ENST00000364653 136 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 RNU4-45P-201ENST00000365469 141 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 RNU6-877P-201ENST00000383868 107 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 Y_RNA.447-201ENST00000384184 113 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 RNU6-1026P-201ENST00000384465 108 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 RNA5SP323-201ENST00000391094 133 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 RNA5SP467-201ENST00000391274 118 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 AL139824.2-201ENST00000458731 1095 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.02□□□□□ -2.41
ABCA4P78363 LRRC6P1-201ENST00000532188 885 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 AP002453.2-201ENST00000533503 320 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.02□□□□□ -2.41
ABCA4P78363 AC104072.1-201ENST00000568817 668 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 AC110760.3-201ENST00000598794 467 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 AL606834.3-201ENST00000602615 496 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 AL603839.4-201ENST00000624658 1005 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 AL390237.1-201ENST00000404226 1415 ntBASIC0.02□□□□□ -2.41
ABCA4P78363 U3.4-201ENST00000363352 213 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms