Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL161431.1-201ENST00000618966 4205 ntBASIC2.06□□□□□ -2.08
LMO4P61968 RNU6-212P-201ENST00000362642 104 ntBASIC2.06□□□□□ -2.08
LMO4P61968 U3.13-201ENST00000364804 214 ntBASIC2.06□□□□□ -2.08
LMO4P61968 RNU4-9P-201ENST00000364951 139 ntBASIC2.06□□□□□ -2.08
LMO4P61968 RNU1-109P-201ENST00000383960 147 ntBASIC2.06□□□□□ -2.08
LMO4P61968 RNU6-968P-201ENST00000384076 107 ntBASIC2.06□□□□□ -2.08
LMO4P61968 RNY3P4-201ENST00000384428 101 ntBASIC2.06□□□□□ -2.08
LMO4P61968 SNORD116-20-201ENST00000384529 92 ntBASIC2.06□□□□□ -2.08
LMO4P61968 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
LMO4P61968 SNORD88.1-201ENST00000408684 91 ntBASIC2.06□□□□□ -2.08
LMO4P61968 RN7SKP123-201ENST00000410732 291 ntBASIC2.06□□□□□ -2.08
LMO4P61968 RPL19P1-201ENST00000411635 428 ntBASIC2.06□□□□□ -2.08
LMO4P61968 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.06□□□□□ -2.08
LMO4P61968 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.06□□□□□ -2.08
LMO4P61968 AC139712.2-201ENST00000424302 339 ntBASIC2.06□□□□□ -2.08
LMO4P61968 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.06□□□□□ -2.08
LMO4P61968 Z98742.2-201ENST00000431564 187 ntBASIC2.06□□□□□ -2.08
LMO4P61968 AC124916.1-201ENST00000444020 547 ntBASIC2.06□□□□□ -2.08
LMO4P61968 AC104389.3-201ENST00000445629 235 ntBASIC2.06□□□□□ -2.08
LMO4P61968 snoU13.30-201ENST00000458951 104 ntBASIC2.06□□□□□ -2.08
LMO4P61968 AP001324.2-201ENST00000461163 319 ntBASIC2.06□□□□□ -2.08
LMO4P61968 RPL30P1-201ENST00000488676 339 ntBASIC2.06□□□□□ -2.08
LMO4P61968 RPL23AP75-201ENST00000491601 451 ntBASIC2.06□□□□□ -2.08
LMO4P61968 RN7SL636P-201ENST00000497504 294 ntBASIC2.06□□□□□ -2.08
LMO4P61968 RNA5SP112-201ENST00000515937 99 ntBASIC2.06□□□□□ -2.08
LMO4P61968 RNA5SP385-201ENST00000515947 110 ntBASIC2.06□□□□□ -2.08
LMO4P61968 RNU6-1023P-201ENST00000516137 106 ntBASIC2.06□□□□□ -2.08
LMO4P61968 AC091144.1-201ENST00000519573 138 ntBASIC2.06□□□□□ -2.08
LMO4P61968 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.06□□□□□ -2.08
LMO4P61968 AC007375.1-201ENST00000554513 578 ntBASIC2.06□□□□□ -2.08
LMO4P61968 AC136932.1-201ENST00000574771 208 ntBASIC2.06□□□□□ -2.08
LMO4P61968 RPL23AP88-201ENST00000605759 454 ntBASIC2.06□□□□□ -2.08
LMO4P61968 AP001282.2-201ENST00000616149 309 ntBASIC2.06□□□□□ -2.08
LMO4P61968 AL449363.1-201ENST00000617815 186 ntBASIC2.06□□□□□ -2.08
LMO4P61968 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.06□□□□□ -2.08
LMO4P61968 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.06□□□□□ -2.08
LMO4P61968 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.06□□□□□ -2.08
LMO4P61968 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.06□□□□□ -2.08
LMO4P61968 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.06□□□□□ -2.08
LMO4P61968 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
LMO4P61968 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LMO4P61968 MTND5P6-201ENST00000422338 1798 ntBASIC2.05□□□□□ -2.08
LMO4P61968 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LMO4P61968 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LMO4P61968 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.05□□□□□ -2.08
LMO4P61968 Y_RNA.84-201ENST00000363011 104 ntBASIC2.05□□□□□ -2.08
LMO4P61968 RNU6-486P-201ENST00000363116 107 ntBASIC2.05□□□□□ -2.08
LMO4P61968 RNA5SP456-201ENST00000364002 114 ntBASIC2.05□□□□□ -2.08
LMO4P61968 RNU6-1286P-201ENST00000383871 107 ntBASIC2.05□□□□□ -2.08
LMO4P61968 SNORA70B-201ENST00000384210 135 ntBASIC2.05□□□□□ -2.08
LMO4P61968 MIR215-201ENST00000384858 110 ntBASIC2.05□□□□□ -2.08
LMO4P61968 MIR218-1-201ENST00000384999 110 ntBASIC2.05□□□□□ -2.08
LMO4P61968 FTH1P15-201ENST00000406984 280 ntBASIC2.05□□□□□ -2.08
LMO4P61968 SNORA3.2-201ENST00000408221 125 ntBASIC2.05□□□□□ -2.08
LMO4P61968 RNU6-1203P-201ENST00000410703 110 ntBASIC2.05□□□□□ -2.08
LMO4P61968 RNU6-1328P-201ENST00000410938 106 ntBASIC2.05□□□□□ -2.08
LMO4P61968 RNA5SP344-201ENST00000411081 104 ntBASIC2.05□□□□□ -2.08
LMO4P61968 AL591043.1-201ENST00000432461 424 ntBASIC2.05□□□□□ -2.08
LMO4P61968 AL353705.4-201ENST00000449661 238 ntBASIC2.05□□□□□ -2.08
LMO4P61968 Y_RNA.673-201ENST00000516306 88 ntBASIC2.05□□□□□ -2.08
LMO4P61968 SCARNA3-201ENST00000517097 143 ntBASIC2.05□□□□□ -2.08
LMO4P61968 CKS1BP7-201ENST00000522230 235 ntBASIC2.05□□□□□ -2.08
LMO4P61968 AC093023.1-201ENST00000547375 507 ntBASIC2.05□□□□□ -2.08
LMO4P61968 AC090617.3-201ENST00000573670 475 ntBASIC2.05□□□□□ -2.08
LMO4P61968 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.05□□□□□ -2.08
LMO4P61968 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.05□□□□□ -2.08
LMO4P61968 SNORA43.4-201ENST00000629559 138 ntBASIC2.05□□□□□ -2.08
LMO4P61968 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
LMO4P61968 AC135776.4-201ENST00000624300 1904 ntBASIC2.05□□□□□ -2.08
LMO4P61968 AL109809.4-201ENST00000603520 2185 ntBASIC2.05□□□□□ -2.08
LMO4P61968 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.04□□□□□ -2.08
LMO4P61968 RNU6-858P-201ENST00000362436 107 ntBASIC2.04□□□□□ -2.08
LMO4P61968 SNORD56.1-201ENST00000362913 68 ntBASIC2.04□□□□□ -2.08
LMO4P61968 snoU2_19.2-201ENST00000363024 80 ntBASIC2.04□□□□□ -2.08
LMO4P61968 SNORA20.1-201ENST00000364790 130 ntBASIC2.04□□□□□ -2.08
LMO4P61968 SNORD32A-201ENST00000364805 84 ntBASIC2.04□□□□□ -2.08
LMO4P61968 Y_RNA.439-201ENST00000384119 94 ntBASIC2.04□□□□□ -2.08
LMO4P61968 RNU6-17P-201ENST00000384245 107 ntBASIC2.04□□□□□ -2.08
LMO4P61968 RNU6-18P-201ENST00000384527 107 ntBASIC2.04□□□□□ -2.08
LMO4P61968 SNORD115-46-201ENST00000390982 71 ntBASIC2.04□□□□□ -2.08
LMO4P61968 SNORA26.7-201ENST00000391288 122 ntBASIC2.04□□□□□ -2.08
LMO4P61968 AL139095.1-201ENST00000404326 391 ntBASIC2.04□□□□□ -2.08
LMO4P61968 RNU4-53P-201ENST00000410828 140 ntBASIC2.04□□□□□ -2.08
LMO4P61968 MICF-203ENST00000432679 129 ntBASIC2.04□□□□□ -2.08
LMO4P61968 AC007969.2-201ENST00000441891 191 ntBASIC2.04□□□□□ -2.08
LMO4P61968 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.04□□□□□ -2.08
LMO4P61968 AC012308.1-201ENST00000451232 178 ntBASIC2.04□□□□□ -2.08
LMO4P61968 MRPL42P6-201ENST00000486397 371 ntBASIC2.04□□□□□ -2.08
LMO4P61968 RNA5SP76-201ENST00000516277 87 ntBASIC2.04□□□□□ -2.08
LMO4P61968 Y_RNA.713-201ENST00000517013 96 ntBASIC2.04□□□□□ -2.08
LMO4P61968 AC022868.1-201ENST00000517767 391 ntBASIC2.04□□□□□ -2.08
LMO4P61968 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.04□□□□□ -2.08
LMO4P61968 MIR4300-201ENST00000581016 96 ntBASIC2.04□□□□□ -2.08
LMO4P61968 MIR5092-201ENST00000583139 88 ntBASIC2.04□□□□□ -2.08
LMO4P61968 AL109918.3-201ENST00000603072 338 ntBASIC2.04□□□□□ -2.08
LMO4P61968 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.04□□□□□ -2.08
LMO4P61968 AC011476.5-201ENST00000615594 130 ntBASIC2.04□□□□□ -2.08
LMO4P61968 MIR376A1-201ENST00000616574 68 ntBASIC2.04□□□□□ -2.08
LMO4P61968 AC141273.2-201ENST00000618989 130 ntBASIC2.04□□□□□ -2.08
LMO4P61968 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms