Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.29□□□□□ -2.46
CKS1BP61024 MTND1P20-201ENST00000430341 950 ntBASIC-0.29□□□□□ -2.46
CKS1BP61024 MTCO3P10-201ENST00000455912 772 ntBASIC-0.29□□□□□ -2.46
CKS1BP61024 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.29□□□□□ -2.46
CKS1BP61024 ADI1P3-201ENST00000549509 470 ntBASIC-0.29□□□□□ -2.46
CKS1BP61024 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.29□□□□□ -2.46
CKS1BP61024 AC010620.1-201ENST00000601088 1102 ntBASIC-0.29□□□□□ -2.46
CKS1BP61024 AC064807.4-201ENST00000607201 407 ntBASIC-0.29□□□□□ -2.46
CKS1BP61024 AC245297.2-201ENST00000610119 565 ntBASIC-0.29□□□□□ -2.46
CKS1BP61024 RNY1-201ENST00000364228 113 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 RNU6-302P-201ENST00000365249 107 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 RNU6-815P-201ENST00000384080 113 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 RNU6V-201ENST00000384105 107 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 RNU6-692P-201ENST00000384496 107 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 MIR520F-201ENST00000384824 87 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 MIR573-201ENST00000384964 99 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 RNA5SP496-201ENST00000391240 109 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 SNORD71-201ENST00000411292 86 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 RNU6-57P-201ENST00000411348 103 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.3□□□□□ -2.46
CKS1BP61024 CDK8P2-201ENST00000415020 547 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 AL133396.1-201ENST00000432048 687 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 MTND1P32-201ENST00000433043 938 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.3□□□□□ -2.46
CKS1BP61024 AC026616.1-201ENST00000523157 525 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 AL158032.1-201ENST00000605401 106 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 RNU6-94P-201ENST00000607728 107 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 AC097478.2-201ENST00000610572 514 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 AC015726.2-201ENST00000620112 122 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 AC006001.4-201ENST00000622243 395 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 AP002782.1-201ENST00000623107 614 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 MIR6079-201ENST00000635807 62 ntBASIC-0.3□□□□□ -2.46
CKS1BP61024 AC073544.1-201ENST00000600110 1595 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 MIR330-201ENST00000362196 94 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 RNU6-552P-201ENST00000362869 119 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 SNORD32A-201ENST00000364805 84 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 USP9YP11-201ENST00000427537 717 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 AC016717.1-201ENST00000448918 286 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 MTCO2P18-201ENST00000457151 658 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 AC079382.1-201ENST00000493346 557 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 AC016632.1-201ENST00000503994 196 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 AC116347.2-201ENST00000514912 523 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 RNU6-863P-201ENST00000515989 104 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 AL596327.1-201ENST00000603629 213 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 Z99497.2-201ENST00000603634 310 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 Z99289.3-201ENST00000605586 594 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 AP002802.2-201ENST00000605877 235 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 SNORA28-201ENST00000606769 126 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 AC012409.4-201ENST00000612923 249 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 AL136221.1-201ENST00000621449 509 ntBASIC-0.31□□□□□ -2.46
CKS1BP61024 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.32□□□□□ -2.46
CKS1BP61024 MIR549A-201ENST00000385268 96 ntBASIC-0.32□□□□□ -2.46
CKS1BP61024 SNORD111-201ENST00000408139 94 ntBASIC-0.32□□□□□ -2.46
CKS1BP61024 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.32□□□□□ -2.46
CKS1BP61024 RPL23AP54-201ENST00000495129 419 ntBASIC-0.32□□□□□ -2.46
CKS1BP61024 AC010469.2-201ENST00000496412 480 ntBASIC-0.32□□□□□ -2.46
CKS1BP61024 AC074133.1-201ENST00000515696 183 ntBASIC-0.32□□□□□ -2.46
CKS1BP61024 AF235103.2-201ENST00000525753 346 ntBASIC-0.32□□□□□ -2.46
CKS1BP61024 AP003716.2-201ENST00000528260 108 ntBASIC-0.32□□□□□ -2.46
CKS1BP61024 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.32□□□□□ -2.46
CKS1BP61024 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.32□□□□□ -2.46
CKS1BP61024 MIR5692A1-201ENST00000580523 69 ntBASIC-0.32□□□□□ -2.46
CKS1BP61024 MIR4305-201ENST00000583252 102 ntBASIC-0.32□□□□□ -2.46
CKS1BP61024 AC090517.2-201ENST00000614966 680 ntBASIC-0.32□□□□□ -2.46
CKS1BP61024 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.32□□□□□ -2.46
CKS1BP61024 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.33□□□□□ -2.46
CKS1BP61024 MIR18A-201ENST00000362310 71 ntBASIC-0.33□□□□□ -2.46
CKS1BP61024 RNU6-514P-201ENST00000384208 107 ntBASIC-0.33□□□□□ -2.46
CKS1BP61024 MIR208B-201ENST00000401172 77 ntBASIC-0.33□□□□□ -2.46
CKS1BP61024 SNORA40.8-201ENST00000411034 126 ntBASIC-0.33□□□□□ -2.46
CKS1BP61024 MTND3P17-201ENST00000416968 344 ntBASIC-0.33□□□□□ -2.46
CKS1BP61024 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
CKS1BP61024 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.33□□□□□ -2.46
CKS1BP61024 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.33□□□□□ -2.46
CKS1BP61024 ELOCP24-201ENST00000456370 334 ntBASIC-0.33□□□□□ -2.46
CKS1BP61024 SNORA25.12-201ENST00000516202 82 ntBASIC-0.33□□□□□ -2.46
CKS1BP61024 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.33□□□□□ -2.46
CKS1BP61024 MIR1273G-201ENST00000577677 100 ntBASIC-0.33□□□□□ -2.46
CKS1BP61024 MTATP6P2-201ENST00000603319 678 ntBASIC-0.33□□□□□ -2.46
CKS1BP61024 MIR8087-201ENST00000612745 78 ntBASIC-0.33□□□□□ -2.46
CKS1BP61024 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.33□□□□□ -2.46
CKS1BP61024 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.33□□□□□ -2.46
CKS1BP61024 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.34□□□□□ -2.46
CKS1BP61024 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.34□□□□□ -2.46
CKS1BP61024 RNU6-371P-201ENST00000364283 108 ntBASIC-0.34□□□□□ -2.46
CKS1BP61024 RNU6-424P-201ENST00000384367 105 ntBASIC-0.34□□□□□ -2.46
CKS1BP61024 RNU6-769P-201ENST00000384407 104 ntBASIC-0.34□□□□□ -2.46
CKS1BP61024 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.34□□□□□ -2.46
CKS1BP61024 AC006366.1-201ENST00000422002 759 ntBASIC-0.34□□□□□ -2.46
CKS1BP61024 AL358176.2-201ENST00000425769 204 ntBASIC-0.34□□□□□ -2.46
CKS1BP61024 RPS25P9-201ENST00000435591 252 ntBASIC-0.34□□□□□ -2.46
CKS1BP61024 RPL37P21-201ENST00000435890 276 ntBASIC-0.34□□□□□ -2.46
CKS1BP61024 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.34□□□□□ -2.46
CKS1BP61024 RNU6-377P-201ENST00000515965 102 ntBASIC-0.34□□□□□ -2.46
CKS1BP61024 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.34□□□□□ -2.46
CKS1BP61024 AC141557.1-201ENST00000540982 400 ntBASIC-0.34□□□□□ -2.46
CKS1BP61024 MIR3192-201ENST00000584920 77 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms