Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC124303.1-201ENST00000605703 360 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 AC019193.3-201ENST00000609144 554 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMGCS2P54868 AL391987.6-201ENST00000305671 199 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 RNU5B-2P-201ENST00000363036 113 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 RNU6-1059P-201ENST00000363752 98 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 SNORA29-201ENST00000384183 140 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 RNU6-842P-201ENST00000384269 107 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 MIR499A-201ENST00000384903 122 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 SNORA40.19-201ENST00000390846 128 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 MIR1323-201ENST00000408090 73 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 RNU6-174P-201ENST00000410406 106 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 RNU4-14P-201ENST00000410858 122 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGCS2P54868 USP9YP30-201ENST00000430729 455 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 RPS3AP52-201ENST00000435639 297 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 MTATP6P23-201ENST00000440153 476 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGCS2P54868 DAP3P1-201ENST00000441522 278 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 AC009474.2-201ENST00000451383 136 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 AC091951.2-201ENST00000500762 203 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 AC114801.2-201ENST00000503825 781 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 AL121579.1-201ENST00000555129 305 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 AC026271.5-201ENST00000577873 130 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 MIR548S-201ENST00000581352 82 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 AC005730.3-201ENST00000583067 366 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 MIR3136-201ENST00000583498 78 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 AC008749.1-201ENST00000597650 306 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 AL031274.2-201ENST00000599419 203 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 Z98751.3-201ENST00000604447 521 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 MIR6128-201ENST00000615528 109 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 AC063943.3-201ENST00000615562 356 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 MIR7111-201ENST00000619751 72 ntBASIC1.84□□□□□ -2.11
HMGCS2P54868 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
HMGCS2P54868 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.83□□□□□ -2.12
HMGCS2P54868 SNORD32B-201ENST00000364460 84 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 SNORD48-201ENST00000364953 64 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 Y_RNA.473-201ENST00000384333 102 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 RNU6-933P-201ENST00000384424 107 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 RNU6-790P-201ENST00000384479 105 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 SNORA67.6-201ENST00000391093 99 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 AL512604.1-201ENST00000404812 257 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 MTCYBP2-201ENST00000407745 171 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 BX510359.4-201ENST00000423750 193 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 HMGN2P19-201ENST00000425149 265 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 MTND3P10-201ENST00000450967 341 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 SNORD5.1-201ENST00000458800 75 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 AC132942.1-201ENST00000486753 483 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 AF186996.7-201ENST00000492781 209 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.83□□□□□ -2.12
HMGCS2P54868 AC021146.2-201ENST00000504736 556 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.83□□□□□ -2.12
HMGCS2P54868 AC026782.1-201ENST00000512952 449 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.83□□□□□ -2.12
HMGCS2P54868 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HMGCS2P54868 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.83□□□□□ -2.12
HMGCS2P54868 FGF7P1-201ENST00000582820 288 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 UBE2V2P2-201ENST00000587677 504 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 POLR3GP2-201ENST00000588366 668 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 AC092794.2-201ENST00000620933 563 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 AC090517.3-201ENST00000625170 141 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 TPTEP1-208ENST00000636884 213 ntBASIC1.83□□□□□ -2.12
HMGCS2P54868 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
HMGCS2P54868 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.82□□□□□ -2.12
HMGCS2P54868 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.82□□□□□ -2.12
HMGCS2P54868 SNORA25.9-201ENST00000365087 128 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 Y_RNA.327-201ENST00000365201 102 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 RNU6-1286P-201ENST00000383871 107 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 Y_RNA.474-201ENST00000384341 102 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 MIR29B2-201ENST00000385055 81 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 SNORA12-201ENST00000391162 147 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 Y_RNA.597-201ENST00000410463 100 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 RNU2-40P-201ENST00000410833 196 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 AC074085.1-201ENST00000413598 418 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 AL139396.1-201ENST00000421137 167 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGCS2P54868 AL353572.1-201ENST00000442490 417 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.82□□□□□ -2.12
HMGCS2P54868 MTND4P17-201ENST00000470444 350 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 AC145146.1-201ENST00000496370 254 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGCS2P54868 SNORA4.4-201ENST00000515921 135 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 RNU6-507P-201ENST00000516045 100 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 RNA5SP364-201ENST00000516938 78 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 AC018630.3-201ENST00000542637 96 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 AC016256.1-201ENST00000547971 354 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 AC021231.3-201ENST00000558497 370 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGCS2P54868 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 AL627230.6-201ENST00000611129 280 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 PCGEM1.1-201ENST00000613431 131 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 AC005520.5-201ENST00000613926 164 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 AC098657.3-201ENST00000620434 263 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 AC091932.3-201ENST00000624223 323 ntBASIC1.82□□□□□ -2.12
HMGCS2P54868 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.82□□□□□ -2.12
HMGCS2P54868 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
HMGCS2P54868 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMGCS2P54868 RNU6-596P-201ENST00000365395 98 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms