Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC104629.2-201ENST00000468627 598 ntBASIC-1.43□□□□□ -2.64
CLTCL1P53675 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-1.43□□□□□ -2.64
CLTCL1P53675 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-1.43□□□□□ -2.64
CLTCL1P53675 FER-210ENST00000628534 558 ntTSL 5 BASIC-1.43□□□□□ -2.64
CLTCL1P53675 U6.99-201ENST00000637524 83 ntBASIC-1.43□□□□□ -2.64
CLTCL1P53675 MTND5P33-201ENST00000571250 1450 ntBASIC-1.43□□□□□ -2.64
CLTCL1P53675 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.44□□□□□ -2.64
CLTCL1P53675 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.44□□□□□ -2.64
CLTCL1P53675 AC107401.1-201ENST00000503426 685 ntBASIC-1.44□□□□□ -2.64
CLTCL1P53675 AC023824.3-201ENST00000569003 562 ntBASIC-1.44□□□□□ -2.64
CLTCL1P53675 AC090186.1-201ENST00000605991 572 ntBASIC-1.44□□□□□ -2.64
CLTCL1P53675 MTCO3P41-201ENST00000414801 328 ntBASIC-1.44□□□□□ -2.64
CLTCL1P53675 MTATP6P30-201ENST00000443540 664 ntBASIC-1.44□□□□□ -2.64
CLTCL1P53675 RNU6-977P-201ENST00000516411 103 ntBASIC-1.44□□□□□ -2.64
CLTCL1P53675 RNU6-897P-201ENST00000517135 105 ntBASIC-1.44□□□□□ -2.64
CLTCL1P53675 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-1.44□□□□□ -2.64
CLTCL1P53675 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.44□□□□□ -2.64
CLTCL1P53675 AC078795.2-201ENST00000602835 1252 ntBASIC-1.44□□□□□ -2.64
CLTCL1P53675 HMGB1P51-201ENST00000605166 638 ntBASIC-1.44□□□□□ -2.64
CLTCL1P53675 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.45□□□□□ -2.64
CLTCL1P53675 SNORA2.2-201ENST00000365473 135 ntBASIC-1.45□□□□□ -2.64
CLTCL1P53675 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-1.45□□□□□ -2.64
CLTCL1P53675 LARP1BP3-201ENST00000437229 869 ntBASIC-1.45□□□□□ -2.64
CLTCL1P53675 SNRPEP8-201ENST00000442866 260 ntBASIC-1.45□□□□□ -2.64
CLTCL1P53675 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-1.45□□□□□ -2.64
CLTCL1P53675 AC007215.1-201ENST00000464893 276 ntBASIC-1.45□□□□□ -2.64
CLTCL1P53675 OR8K2P-201ENST00000524645 927 ntBASIC-1.45□□□□□ -2.64
CLTCL1P53675 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-1.45□□□□□ -2.64
CLTCL1P53675 CR383656.4-201ENST00000546909 122 ntBASIC-1.45□□□□□ -2.64
CLTCL1P53675 RNU6-438P-201ENST00000365561 103 ntBASIC-1.46□□□□□ -2.64
CLTCL1P53675 RNU2-3P-201ENST00000410144 191 ntBASIC-1.46□□□□□ -2.64
CLTCL1P53675 RPL21P38-201ENST00000418090 167 ntBASIC-1.46□□□□□ -2.64
CLTCL1P53675 AL590135.1-201ENST00000422215 156 ntBASIC-1.46□□□□□ -2.64
CLTCL1P53675 AC019205.3-201ENST00000424573 156 ntBASIC-1.46□□□□□ -2.64
CLTCL1P53675 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-1.46□□□□□ -2.64
CLTCL1P53675 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.46□□□□□ -2.64
CLTCL1P53675 AC016700.2-201ENST00000446011 156 ntBASIC-1.46□□□□□ -2.64
CLTCL1P53675 TPT1P7-201ENST00000458300 517 ntBASIC-1.46□□□□□ -2.64
CLTCL1P53675 AC015911.1-201ENST00000495111 156 ntBASIC-1.46□□□□□ -2.64
CLTCL1P53675 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-1.46□□□□□ -2.64
CLTCL1P53675 RNA5SP461-201ENST00000516451 104 ntBASIC-1.46□□□□□ -2.64
CLTCL1P53675 RNY4P6-201ENST00000363667 96 ntBASIC-1.47□□□□□ -2.64
CLTCL1P53675 SNORA26-201ENST00000391286 122 ntBASIC-1.47□□□□□ -2.64
CLTCL1P53675 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.47□□□□□ -2.64
CLTCL1P53675 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.47□□□□□ -2.64
CLTCL1P53675 AL590491.3-201ENST00000610731 82 ntBASIC-1.47□□□□□ -2.64
CLTCL1P53675 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.47□□□□□ -2.64
CLTCL1P53675 AL513423.1-201ENST00000621695 132 ntBASIC-1.47□□□□□ -2.64
CLTCL1P53675 RNU6-369P-201ENST00000362515 102 ntBASIC-1.48□□□□□ -2.65
CLTCL1P53675 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.48□□□□□ -2.65
CLTCL1P53675 Y_RNA.567-201ENST00000384736 106 ntBASIC-1.48□□□□□ -2.65
CLTCL1P53675 MIR563-201ENST00000385080 79 ntBASIC-1.48□□□□□ -2.65
CLTCL1P53675 AL391840.1-201ENST00000571144 367 ntBASIC-1.48□□□□□ -2.65
CLTCL1P53675 U8.5-201ENST00000364528 136 ntBASIC-1.48□□□□□ -2.65
CLTCL1P53675 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.48□□□□□ -2.65
CLTCL1P53675 AL356583.2-201ENST00000426536 280 ntBASIC-1.48□□□□□ -2.65
CLTCL1P53675 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-1.48□□□□□ -2.65
CLTCL1P53675 AC007327.1-201ENST00000447461 264 ntBASIC-1.48□□□□□ -2.65
CLTCL1P53675 AL357080.1-201ENST00000617394 239 ntBASIC-1.48□□□□□ -2.65
CLTCL1P53675 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-1.48□□□□□ -2.65
CLTCL1P53675 RNU1-76P-201ENST00000362903 159 ntBASIC-1.49□□□□□ -2.65
CLTCL1P53675 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-1.49□□□□□ -2.65
CLTCL1P53675 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-1.49□□□□□ -2.65
CLTCL1P53675 AC023158.1-201ENST00000561632 1025 ntBASIC-1.49□□□□□ -2.65
CLTCL1P53675 AC100830.2-201ENST00000581636 240 ntBASIC-1.49□□□□□ -2.65
CLTCL1P53675 AL442067.1-201ENST00000613261 223 ntBASIC-1.49□□□□□ -2.65
CLTCL1P53675 MIR655-201ENST00000362159 97 ntBASIC-1.5□□□□□ -2.65
CLTCL1P53675 SNORA72.2-201ENST00000365028 127 ntBASIC-1.5□□□□□ -2.65
CLTCL1P53675 RNU6-1207P-201ENST00000384343 107 ntBASIC-1.5□□□□□ -2.65
CLTCL1P53675 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.5□□□□□ -2.65
CLTCL1P53675 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-1.5□□□□□ -2.65
CLTCL1P53675 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-1.5□□□□□ -2.65
CLTCL1P53675 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-1.5□□□□□ -2.65
CLTCL1P53675 AC090572.1-201ENST00000519251 160 ntBASIC-1.5□□□□□ -2.65
CLTCL1P53675 SNORD39.3-201ENST00000584451 71 ntBASIC-1.5□□□□□ -2.65
CLTCL1P53675 AL390123.1-201ENST00000603216 237 ntBASIC-1.5□□□□□ -2.65
CLTCL1P53675 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-1.5□□□□□ -2.65
CLTCL1P53675 MIR101-2-201ENST00000362195 79 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-1.51□□□□□ -2.65
CLTCL1P53675 RNU2-23P-201ENST00000410545 195 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 PSMA6P3-201ENST00000428242 164 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 FO393419.3-201ENST00000428741 282 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 MTCO2P7-201ENST00000446518 666 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 snoU13.14-201ENST00000459372 104 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.51□□□□□ -2.65
CLTCL1P53675 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 RNU6-528P-201ENST00000516926 100 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-1.51□□□□□ -2.65
CLTCL1P53675 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-1.51□□□□□ -2.65
CLTCL1P53675 AC093023.1-201ENST00000547375 507 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 AC063944.3-201ENST00000609969 533 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 RNU6-811P-201ENST00000384069 107 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 SNORA2B-201ENST00000384583 137 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 SNORA26.3-201ENST00000391119 136 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 MTND1P14-201ENST00000427400 950 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-1.51□□□□□ -2.65
CLTCL1P53675 MTCO3P27-201ENST00000514397 196 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 AC040926.1-201ENST00000530195 238 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 LRRC6P1-201ENST00000532188 885 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 AL603758.1-201ENST00000618654 241 ntBASIC-1.51□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms