Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 Y_RNA.277-201ENST00000364754 102 ntBASIC3.35□□□□□ -1.87
MRE11P49959 SNORD63-201ENST00000384262 68 ntBASIC3.35□□□□□ -1.87
MRE11P49959 Y_RNA.462-201ENST00000384268 102 ntBASIC3.35□□□□□ -1.87
MRE11P49959 RNU6-102P-201ENST00000384485 104 ntBASIC3.35□□□□□ -1.87
MRE11P49959 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.35□□□□□ -1.87
MRE11P49959 AC096638.1-201ENST00000444678 216 ntBASIC3.35□□□□□ -1.87
MRE11P49959 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.35□□□□□ -1.87
MRE11P49959 AL109933.2-201ENST00000452651 260 ntBASIC3.35□□□□□ -1.87
MRE11P49959 SNRPGP7-201ENST00000469016 106 ntBASIC3.35□□□□□ -1.87
MRE11P49959 AP001025.1-201ENST00000486139 332 ntBASIC3.35□□□□□ -1.87
MRE11P49959 RNA5SP367-201ENST00000516557 118 ntBASIC3.35□□□□□ -1.87
MRE11P49959 SCARNA24.2-201ENST00000516968 130 ntBASIC3.35□□□□□ -1.87
MRE11P49959 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.35□□□□□ -1.87
MRE11P49959 HSPE1P4-201ENST00000550617 308 ntBASIC3.35□□□□□ -1.87
MRE11P49959 AC021739.1-201ENST00000559631 174 ntBASIC3.35□□□□□ -1.87
MRE11P49959 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.35□□□□□ -1.87
MRE11P49959 AC009163.5-201ENST00000575421 637 ntBASIC3.35□□□□□ -1.87
MRE11P49959 AC130289.1-201ENST00000577321 73 ntBASIC3.35□□□□□ -1.87
MRE11P49959 BX284668.6-201ENST00000606899 438 ntBASIC3.35□□□□□ -1.87
MRE11P49959 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.35□□□□□ -1.87
MRE11P49959 AC110491.1-201ENST00000562191 2010 ntBASIC3.35□□□□□ -1.87
MRE11P49959 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.35□□□□□ -1.87
MRE11P49959 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.35□□□□□ -1.87
MRE11P49959 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.35□□□□□ -1.87
MRE11P49959 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MRE11P49959 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
MRE11P49959 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.34□□□□□ -1.87
MRE11P49959 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MRE11P49959 AP006437.1-201ENST00000641440 3685 ntBASIC3.34□□□□□ -1.87
MRE11P49959 RNU6-1266P-201ENST00000362794 105 ntBASIC3.34□□□□□ -1.87
MRE11P49959 RNU6-1141P-201ENST00000364520 107 ntBASIC3.34□□□□□ -1.87
MRE11P49959 Y_RNA.319-201ENST00000365138 92 ntBASIC3.34□□□□□ -1.87
MRE11P49959 RNU6-541P-201ENST00000384709 110 ntBASIC3.34□□□□□ -1.87
MRE11P49959 MIR487A-201ENST00000385009 80 ntBASIC3.34□□□□□ -1.87
MRE11P49959 MIR10B-201ENST00000385011 110 ntBASIC3.34□□□□□ -1.87
MRE11P49959 SNORD12B-201ENST00000410433 91 ntBASIC3.34□□□□□ -1.87
MRE11P49959 RN7SKP61-201ENST00000410642 295 ntBASIC3.34□□□□□ -1.87
MRE11P49959 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.34□□□□□ -1.87
MRE11P49959 GPM6BP3-201ENST00000442797 145 ntBASIC3.34□□□□□ -1.87
MRE11P49959 RN7SL863P-201ENST00000462370 296 ntBASIC3.34□□□□□ -1.87
MRE11P49959 AC016632.1-201ENST00000503994 196 ntBASIC3.34□□□□□ -1.87
MRE11P49959 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.34□□□□□ -1.87
MRE11P49959 RNU4-71P-201ENST00000516258 113 ntBASIC3.34□□□□□ -1.87
MRE11P49959 SNORA9.3-201ENST00000516383 129 ntBASIC3.34□□□□□ -1.87
MRE11P49959 Y_RNA.700-201ENST00000516806 100 ntBASIC3.34□□□□□ -1.87
MRE11P49959 RNU6-182P-201ENST00000516970 105 ntBASIC3.34□□□□□ -1.87
MRE11P49959 CKS1BP7-201ENST00000522230 235 ntBASIC3.34□□□□□ -1.87
MRE11P49959 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MRE11P49959 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.34□□□□□ -1.87
MRE11P49959 AC137590.2-201ENST00000619709 240 ntBASIC3.34□□□□□ -1.87
MRE11P49959 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.34□□□□□ -1.87
MRE11P49959 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MRE11P49959 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.34□□□□□ -1.88
MRE11P49959 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.33□□□□□ -1.88
MRE11P49959 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.33□□□□□ -1.88
MRE11P49959 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MRE11P49959 Y_RNA.65-201ENST00000362846 100 ntBASIC3.33□□□□□ -1.88
MRE11P49959 U8.2-201ENST00000363156 134 ntBASIC3.33□□□□□ -1.88
MRE11P49959 RNU6-1062P-201ENST00000383908 107 ntBASIC3.33□□□□□ -1.88
MRE11P49959 SNORA36A-201ENST00000384221 132 ntBASIC3.33□□□□□ -1.88
MRE11P49959 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
MRE11P49959 RNA5SP252-201ENST00000391131 119 ntBASIC3.33□□□□□ -1.88
MRE11P49959 AC005002.2-201ENST00000438228 269 ntBASIC3.33□□□□□ -1.88
MRE11P49959 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.33□□□□□ -1.88
MRE11P49959 HSPE1P25-201ENST00000455484 251 ntBASIC3.33□□□□□ -1.88
MRE11P49959 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.33□□□□□ -1.88
MRE11P49959 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.33□□□□□ -1.88
MRE11P49959 AC008885.1-201ENST00000514930 301 ntBASIC3.33□□□□□ -1.88
MRE11P49959 RN7SKP49-201ENST00000516675 260 ntBASIC3.33□□□□□ -1.88
MRE11P49959 AP000867.2-201ENST00000532468 320 ntBASIC3.33□□□□□ -1.88
MRE11P49959 AC006199.1-201ENST00000548728 219 ntBASIC3.33□□□□□ -1.88
MRE11P49959 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.33□□□□□ -1.88
MRE11P49959 AC005296.1-201ENST00000616145 209 ntBASIC3.33□□□□□ -1.88
MRE11P49959 AC073308.1-201ENST00000623696 305 ntBASIC3.33□□□□□ -1.88
MRE11P49959 AC010297.1-201ENST00000623948 149 ntBASIC3.33□□□□□ -1.88
MRE11P49959 MIR3529-201ENST00000637713 78 ntBASIC3.33□□□□□ -1.88
MRE11P49959 ADAM3A-203ENST00000461344 2157 ntBASIC3.33□□□□□ -1.88
MRE11P49959 AC010680.1-201ENST00000590024 3590 ntBASIC3.32□□□□□ -1.88
MRE11P49959 HAUS6P2-201ENST00000433254 2404 ntBASIC3.32□□□□□ -1.88
MRE11P49959 RNU6-137P-201ENST00000363680 108 ntBASIC3.32□□□□□ -1.88
MRE11P49959 RNU6-280P-201ENST00000364145 104 ntBASIC3.32□□□□□ -1.88
MRE11P49959 Y_RNA.274-201ENST00000364714 101 ntBASIC3.32□□□□□ -1.88
MRE11P49959 RNU6-290P-201ENST00000365212 101 ntBASIC3.32□□□□□ -1.88
MRE11P49959 SNORD21-201ENST00000383953 95 ntBASIC3.32□□□□□ -1.88
MRE11P49959 RNU6-281P-201ENST00000384212 103 ntBASIC3.32□□□□□ -1.88
MRE11P49959 SNORD15B-201ENST00000384714 146 ntBASIC3.32□□□□□ -1.88
MRE11P49959 RNU6-159P-201ENST00000391080 106 ntBASIC3.32□□□□□ -1.88
MRE11P49959 MIR1287-201ENST00000408492 90 ntBASIC3.32□□□□□ -1.88
MRE11P49959 EEF1A1P41-201ENST00000414667 207 ntBASIC3.32□□□□□ -1.88
MRE11P49959 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.32□□□□□ -1.88
MRE11P49959 PIGPP3-201ENST00000425307 415 ntBASIC3.32□□□□□ -1.88
MRE11P49959 WARS2P1-201ENST00000429678 537 ntBASIC3.32□□□□□ -1.88
MRE11P49959 SERF1AP1-201ENST00000514575 187 ntBASIC3.32□□□□□ -1.88
MRE11P49959 SNORA81.3-201ENST00000517283 198 ntBASIC3.32□□□□□ -1.88
MRE11P49959 RRN3P3-201ENST00000549207 578 ntBASIC3.32□□□□□ -1.88
MRE11P49959 UBL5P4-201ENST00000562584 236 ntBASIC3.32□□□□□ -1.88
MRE11P49959 MIR5695-201ENST00000579717 85 ntBASIC3.32□□□□□ -1.88
MRE11P49959 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.32□□□□□ -1.88
MRE11P49959 U2.14-201ENST00000615943 113 ntBASIC3.32□□□□□ -1.88
MRE11P49959 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms