Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MIR10B-201ENST00000385011 110 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 AL357139.1-201ENST00000407792 426 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 SNORA11.1-201ENST00000408133 129 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 MIR320B2-201ENST00000408479 138 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 MCFD2P1-201ENST00000417812 300 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 MRPS18CP6-201ENST00000423587 223 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.01□□□□□ -2.09
NKX2-1P43699 MTCO3P29-201ENST00000432119 779 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 AL353997.1-201ENST00000432936 108 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 AC107083.1-201ENST00000439643 279 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 MIR2053-201ENST00000459295 91 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.01□□□□□ -2.09
NKX2-1P43699 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.01□□□□□ -2.09
NKX2-1P43699 RNU6-120P-201ENST00000516077 103 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 RNU6-344P-201ENST00000516635 111 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 RNU4-77P-201ENST00000516692 156 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 RNU6-988P-201ENST00000519081 107 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.01□□□□□ -2.09
NKX2-1P43699 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.01□□□□□ -2.09
NKX2-1P43699 ELOCP29-201ENST00000588193 334 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 VN1R91P-201ENST00000594377 169 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.01□□□□□ -2.09
NKX2-1P43699 AC016727.2-201ENST00000603988 621 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 TCL6_2.1-201ENST00000615162 119 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 AL137790.1-201ENST00000634283 177 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 MIR4272-201ENST00000635924 64 ntBASIC2.01□□□□□ -2.09
NKX2-1P43699 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
NKX2-1P43699 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
NKX2-1P43699 AP006437.1-201ENST00000641440 3685 ntBASIC2□□□□□ -2.09
NKX2-1P43699 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
NKX2-1P43699 RNU6-234P-201ENST00000365229 104 ntBASIC2□□□□□ -2.09
NKX2-1P43699 RNU1-51P-201ENST00000365345 176 ntBASIC2□□□□□ -2.09
NKX2-1P43699 RNU6-1093P-201ENST00000391194 107 ntBASIC2□□□□□ -2.09
NKX2-1P43699 RNA5SP270-201ENST00000411361 118 ntBASIC2□□□□□ -2.09
NKX2-1P43699 MTCO3P19-201ENST00000415864 321 ntBASIC2□□□□□ -2.09
NKX2-1P43699 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2□□□□□ -2.09
NKX2-1P43699 AC007395.1-201ENST00000451333 677 ntBASIC2□□□□□ -2.09
NKX2-1P43699 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2□□□□□ -2.09
NKX2-1P43699 AC112492.4-201ENST00000456549 352 ntBASIC2□□□□□ -2.09
NKX2-1P43699 SNORA4.4-201ENST00000515921 135 ntBASIC2□□□□□ -2.09
NKX2-1P43699 HSPE1P18-201ENST00000517602 280 ntBASIC2□□□□□ -2.09
NKX2-1P43699 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2□□□□□ -2.09
NKX2-1P43699 AP002770.2-201ENST00000543613 532 ntBASIC2□□□□□ -2.09
NKX2-1P43699 AC078899.2-201ENST00000595282 212 ntBASIC2□□□□□ -2.09
NKX2-1P43699 Y_RNA.812-201ENST00000610788 101 ntBASIC2□□□□□ -2.09
NKX2-1P43699 Y_RNA.784-201ENST00000613803 101 ntBASIC2□□□□□ -2.09
NKX2-1P43699 Y_RNA.787-201ENST00000616522 101 ntBASIC2□□□□□ -2.09
NKX2-1P43699 Y_RNA.780-201ENST00000617336 101 ntBASIC2□□□□□ -2.09
NKX2-1P43699 Y_RNA.801-201ENST00000619005 101 ntBASIC2□□□□□ -2.09
NKX2-1P43699 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2□□□□□ -2.09
NKX2-1P43699 U4.3-201ENST00000621047 82 ntBASIC2□□□□□ -2.09
NKX2-1P43699 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2□□□□□ -2.09
NKX2-1P43699 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.99□□□□□ -2.09
NKX2-1P43699 AC009487.4-201ENST00000624969 3585 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 AC007336.1-201ENST00000576365 3828 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NKX2-1P43699 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
NKX2-1P43699 MIR21-201ENST00000362134 72 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 Y_RNA.31-201ENST00000362574 102 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 Y_RNA.99-201ENST00000363138 105 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 SNORA3A-201ENST00000364113 130 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 RNU6-1145P-201ENST00000384246 107 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 RNY3P4-201ENST00000384428 101 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 Y_RNA.557-201ENST00000384680 107 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 SNORA12-201ENST00000391162 147 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
NKX2-1P43699 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.99□□□□□ -2.09
NKX2-1P43699 AC105272.1-201ENST00000438604 198 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 NDUFB4P10-201ENST00000452541 359 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 PRELID3BP1-201ENST00000457142 540 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 snoU13.6-201ENST00000458785 104 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.99□□□□□ -2.09
NKX2-1P43699 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.99□□□□□ -2.09
NKX2-1P43699 RNA5SP82-201ENST00000516707 92 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 RN7SKP295-201ENST00000517264 153 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.99□□□□□ -2.09
NKX2-1P43699 AL442163.3-201ENST00000554110 156 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 AC233702.2-202ENST00000562547 291 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.99□□□□□ -2.09
NKX2-1P43699 MIR1248-201ENST00000629190 106 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 AL365361.1-201ENST00000566942 3481 ntBASIC1.99□□□□□ -2.09
NKX2-1P43699 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
NKX2-1P43699 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.98□□□□□ -2.09
NKX2-1P43699 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NKX2-1P43699 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
NKX2-1P43699 MTND5P16-201ENST00000460269 1703 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NKX2-1P43699 Y_RNA.39-201ENST00000362620 98 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 Y_RNA.158-201ENST00000363651 101 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 SNORA22B-201ENST00000383876 138 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 SNORA67.2-201ENST00000384300 149 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 Y_RNA.526-201ENST00000384572 110 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.98□□□□□ -2.09
NKX2-1P43699 USP9YP16-201ENST00000430287 407 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.98□□□□□ -2.09
NKX2-1P43699 RPL23AP83-201ENST00000434984 473 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 AC009237.7-201ENST00000447357 229 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms