Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 uc_338.22-201ENST00000622722 187 ntBASIC2.17□□□□□ -2.06
APOBEC1P41238 MIR1248-201ENST00000629190 106 ntBASIC2.17□□□□□ -2.06
APOBEC1P41238 AC134503.1-201ENST00000633048 54 ntBASIC2.17□□□□□ -2.06
APOBEC1P41238 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBEC1P41238 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
APOBEC1P41238 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
APOBEC1P41238 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOBEC1P41238 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOBEC1P41238 Y_RNA.128-201ENST00000363391 112 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 RNU6-873P-201ENST00000363833 107 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 RNU6-743P-201ENST00000364151 106 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 Y_RNA.557-201ENST00000384680 107 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 MIR10B-201ENST00000385011 110 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 RNU2-48P-201ENST00000410694 191 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 AC009237.7-201ENST00000447357 229 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 RNU7-14P-201ENST00000459331 62 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 Y_RNA.631-201ENST00000459607 101 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 AC026436.1-201ENST00000510537 270 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.16□□□□□ -2.06
APOBEC1P41238 AC034114.1-201ENST00000520293 285 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.16□□□□□ -2.06
APOBEC1P41238 AC021269.2-201ENST00000532318 330 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 CYCSP26-201ENST00000534107 320 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 NDUFA5P6-201ENST00000542110 379 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.16□□□□□ -2.06
APOBEC1P41238 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.16□□□□□ -2.06
APOBEC1P41238 ANP32BP3-201ENST00000559213 706 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.16□□□□□ -2.06
APOBEC1P41238 MIR5695-201ENST00000579717 85 ntBASIC2.16□□□□□ -2.06
APOBEC1P41238 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.16□□□□□ -2.06
APOBEC1P41238 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.15□□□□□ -2.06
APOBEC1P41238 Y_RNA.39-201ENST00000362620 98 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 RNA5SP393-201ENST00000363423 117 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 RNU1-91P-201ENST00000364746 163 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 RNU1-115P-201ENST00000365329 160 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 Y_RNA.394-201ENST00000383942 103 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 RNU6-1026P-201ENST00000384465 108 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 Y_RNA.592-201ENST00000410274 109 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 EIF1P2-201ENST00000428233 350 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 AL445305.1-201ENST00000432577 575 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 AC096638.1-201ENST00000444678 216 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 AL513328.1-201ENST00000446460 224 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 RNU7-169P-201ENST00000459456 61 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.15□□□□□ -2.07
APOBEC1P41238 AC234781.5-201ENST00000508429 271 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 AC022868.1-201ENST00000517767 391 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 DEFB131C-201ENST00000528817 165 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 MIR3126-201ENST00000577443 74 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 AC044792.1-201ENST00000593294 196 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 AC103810.6-201ENST00000606708 136 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.15□□□□□ -2.07
APOBEC1P41238 AC091925.1-201ENST00000623204 462 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.15□□□□□ -2.07
APOBEC1P41238 FO624990.1-201ENST00000636373 85 ntBASIC2.15□□□□□ -2.07
APOBEC1P41238 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.15□□□□□ -2.07
APOBEC1P41238 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
APOBEC1P41238 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
APOBEC1P41238 MIR21-201ENST00000362134 72 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 RNU1-62P-201ENST00000362599 164 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 RNU4-42P-201ENST00000364738 142 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 RNU6-438P-201ENST00000365561 103 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 RNU6-281P-201ENST00000384212 103 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 Y_RNA.496-201ENST00000384444 101 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 MIR628-201ENST00000385229 95 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 MTND1P14-201ENST00000427400 950 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.14□□□□□ -2.07
APOBEC1P41238 AC007677.1-201ENST00000445757 515 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 HMGN2P18-201ENST00000450680 270 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.14□□□□□ -2.07
APOBEC1P41238 RN7SL636P-201ENST00000497504 294 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.14□□□□□ -2.07
APOBEC1P41238 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.14□□□□□ -2.07
APOBEC1P41238 SNORA4.4-201ENST00000515921 135 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 RNU6-911P-201ENST00000516523 104 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 RNU6-344P-201ENST00000516635 111 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 RNA5SP490-201ENST00000517141 136 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 AC092447.9-201ENST00000603395 144 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 SNRPGP17-201ENST00000603780 214 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 AL138825.1-201ENST00000618587 192 ntBASIC2.14□□□□□ -2.07
APOBEC1P41238 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.14□□□□□ -2.07
APOBEC1P41238 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
APOBEC1P41238 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
APOBEC1P41238 Y_RNA.138-201ENST00000363462 102 ntBASIC2.13□□□□□ -2.07
APOBEC1P41238 Y_RNA.179-201ENST00000363844 90 ntBASIC2.13□□□□□ -2.07
APOBEC1P41238 RNY3P11-201ENST00000364153 102 ntBASIC2.13□□□□□ -2.07
APOBEC1P41238 RNU6-879P-201ENST00000364328 108 ntBASIC2.13□□□□□ -2.07
APOBEC1P41238 RNU6-474P-201ENST00000384243 107 ntBASIC2.13□□□□□ -2.07
APOBEC1P41238 RNU1-148P-201ENST00000384472 162 ntBASIC2.13□□□□□ -2.07
APOBEC1P41238 MIR300-201ENST00000401138 83 ntBASIC2.13□□□□□ -2.07
APOBEC1P41238 MIR1302-11-201ENST00000408051 138 ntBASIC2.13□□□□□ -2.07
APOBEC1P41238 MIR548P-201ENST00000408336 84 ntBASIC2.13□□□□□ -2.07
APOBEC1P41238 MIR1302-9-201ENST00000408365 138 ntBASIC2.13□□□□□ -2.07
APOBEC1P41238 MIR1302-10-201ENST00000408734 138 ntBASIC2.13□□□□□ -2.07
APOBEC1P41238 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.13□□□□□ -2.07
APOBEC1P41238 SRIP3-201ENST00000413200 219 ntBASIC2.13□□□□□ -2.07
APOBEC1P41238 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.13□□□□□ -2.07
APOBEC1P41238 SUMO1P4-201ENST00000429430 302 ntBASIC2.13□□□□□ -2.07
APOBEC1P41238 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.13□□□□□ -2.07
APOBEC1P41238 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms