Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.58□□□□□ -2.5
SNCAP37840 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.58□□□□□ -2.5
SNCAP37840 AC119751.4-201ENST00000507498 357 ntBASIC-0.58□□□□□ -2.5
SNCAP37840 AK6P2-201ENST00000549020 471 ntBASIC-0.58□□□□□ -2.5
SNCAP37840 AC008752.3-201ENST00000588113 712 ntBASIC-0.58□□□□□ -2.5
SNCAP37840 AC007684.1-201ENST00000609671 477 ntBASIC-0.58□□□□□ -2.5
SNCAP37840 AC124016.2-201ENST00000610058 665 ntBASIC-0.58□□□□□ -2.5
SNCAP37840 AC011155.2-201ENST00000623202 216 ntBASIC-0.58□□□□□ -2.5
SNCAP37840 SNORA18.1-201ENST00000363418 128 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 SMIM11P1-201ENST00000369586 178 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 MRPL42P3-201ENST00000401492 326 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 RNU2-59P-201ENST00000410482 191 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 AL663109.1-201ENST00000411498 844 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.59□□□□□ -2.5
SNCAP37840 AL590623.1-201ENST00000427864 105 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.59□□□□□ -2.5
SNCAP37840 ZNF886P-201ENST00000450781 723 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.59□□□□□ -2.5
SNCAP37840 AC026414.1-201ENST00000504046 698 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 AC112206.3-201ENST00000514578 389 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 RN7SKP164-201ENST00000516138 266 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 RN7SKP287-201ENST00000516546 266 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 AC174048.1-201ENST00000603389 144 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 AC006157.1-201ENST00000611750 366 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 AC103706.2-201ENST00000638080 240 ntBASIC-0.59□□□□□ -2.5
SNCAP37840 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.59□□□□□ -2.5
SNCAP37840 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.59□□□□□ -2.5
SNCAP37840 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.59□□□□□ -2.5
SNCAP37840 AP000568.1-201ENST00000282964 442 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 SNORA25.3-201ENST00000363205 127 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 RNU6-833P-201ENST00000363486 107 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 RNU6-481P-201ENST00000384194 107 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 MIR520G-201ENST00000385064 90 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 MIR520H-201ENST00000385126 88 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 AL354692.1-201ENST00000423044 315 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 AL121578.1-201ENST00000428051 892 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 AC245047.3-201ENST00000429428 127 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.6□□□□□ -2.51
SNCAP37840 AC093850.1-201ENST00000454121 251 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 TRBVB-201ENST00000477100 408 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 RPS23P5-201ENST00000495419 428 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 DEFB108A-201ENST00000530110 222 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.6□□□□□ -2.51
SNCAP37840 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 AC024940.5-201ENST00000622889 474 ntBASIC-0.6□□□□□ -2.51
SNCAP37840 RNU6-78P-201ENST00000362897 107 ntBASIC-0.61□□□□□ -2.51
SNCAP37840 SNORD113.3-201ENST00000364630 78 ntBASIC-0.61□□□□□ -2.51
SNCAP37840 RNU6-384P-201ENST00000364900 104 ntBASIC-0.61□□□□□ -2.51
SNCAP37840 MIR300-201ENST00000401138 83 ntBASIC-0.61□□□□□ -2.51
SNCAP37840 RNU4-46P-201ENST00000410818 138 ntBASIC-0.61□□□□□ -2.51
SNCAP37840 USP9YP28-201ENST00000435142 589 ntBASIC-0.61□□□□□ -2.51
SNCAP37840 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.61□□□□□ -2.51
SNCAP37840 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.61□□□□□ -2.51
SNCAP37840 RNU7-165P-201ENST00000458864 60 ntBASIC-0.61□□□□□ -2.51
SNCAP37840 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.61□□□□□ -2.51
SNCAP37840 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.61□□□□□ -2.51
SNCAP37840 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.61□□□□□ -2.51
SNCAP37840 AC004584.2-201ENST00000570407 410 ntBASIC-0.61□□□□□ -2.51
SNCAP37840 TMF1P1-201ENST00000576058 373 ntBASIC-0.61□□□□□ -2.51
SNCAP37840 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.62□□□□□ -2.51
SNCAP37840 RNU6-545P-201ENST00000362681 104 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 SNORD14C-201ENST00000365382 88 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 MIR329-2-201ENST00000385029 84 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.62□□□□□ -2.51
SNCAP37840 AL158050.1-201ENST00000416077 457 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 HSFY7P-201ENST00000432672 318 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 AL353997.1-201ENST00000432936 108 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 HSFY8P-201ENST00000437934 318 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 AC005002.2-201ENST00000438228 269 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.62□□□□□ -2.51
SNCAP37840 AP000870.1-201ENST00000472927 406 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.62□□□□□ -2.51
SNCAP37840 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.62□□□□□ -2.51
SNCAP37840 MIR4789-201ENST00000577469 82 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 MIR3923-201ENST00000579521 83 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 MIR548AO-201ENST00000579992 96 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 AC068790.2-201ENST00000602601 557 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 AC146944.4-201ENST00000602697 718 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 AC090186.1-201ENST00000605991 572 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 MTND4P4-201ENST00000439033 1366 ntBASIC-0.62□□□□□ -2.51
SNCAP37840 RNU4-56P-201ENST00000364700 142 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 SNORD114-12-201ENST00000365400 75 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 RNU6-925P-201ENST00000384629 104 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.63□□□□□ -2.51
SNCAP37840 AC006366.1-201ENST00000422002 759 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.63□□□□□ -2.51
SNCAP37840 SEPT14P24-201ENST00000447236 180 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 SNORD126-201ENST00000459475 77 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 RNU4-49P-201ENST00000516080 140 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 RNA5SP268-201ENST00000516828 124 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 AC021451.1-201ENST00000523498 1129 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.63□□□□□ -2.51
SNCAP37840 MIR5697-201ENST00000578045 78 ntBASIC-0.63□□□□□ -2.51
SNCAP37840 7SK.7-201ENST00000603504 247 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms