Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC002064.3-201ENST00000623448 346 ntBASIC3.3□□□□□ -1.88
LTBRP36941 FAM35DP-201ENST00000323387 2712 ntBASIC3.29□□□□□ -1.88
LTBRP36941 MAPK10-322ENST00000641485 4530 ntBASIC3.29□□□□□ -1.88
LTBRP36941 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.29□□□□□ -1.88
LTBRP36941 AC062016.1-201ENST00000355719 319 ntBASIC3.29□□□□□ -1.88
LTBRP36941 UBE2WP1-201ENST00000362030 340 ntBASIC3.29□□□□□ -1.88
LTBRP36941 MIR411-201ENST00000362239 96 ntBASIC3.29□□□□□ -1.88
LTBRP36941 SNORD87-201ENST00000364849 89 ntBASIC3.29□□□□□ -1.88
LTBRP36941 Y_RNA.292-201ENST00000364904 97 ntBASIC3.29□□□□□ -1.88
LTBRP36941 Y_RNA.555-201ENST00000384673 110 ntBASIC3.29□□□□□ -1.88
LTBRP36941 RNU1-101P-201ENST00000391171 127 ntBASIC3.29□□□□□ -1.88
LTBRP36941 RNU2-54P-201ENST00000410299 190 ntBASIC3.29□□□□□ -1.88
LTBRP36941 RNU6-1199P-201ENST00000411249 104 ntBASIC3.29□□□□□ -1.88
LTBRP36941 AC126124.2-201ENST00000413542 321 ntBASIC3.29□□□□□ -1.88
LTBRP36941 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.29□□□□□ -1.88
LTBRP36941 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.29□□□□□ -1.88
LTBRP36941 RPS4XP2-201ENST00000458402 793 ntBASIC3.29□□□□□ -1.88
LTBRP36941 AL049830.2-201ENST00000480072 201 ntBASIC3.29□□□□□ -1.88
LTBRP36941 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.29□□□□□ -1.88
LTBRP36941 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.29□□□□□ -1.88
LTBRP36941 RNA5SP112-201ENST00000515937 99 ntBASIC3.29□□□□□ -1.88
LTBRP36941 SCARNA17.1-201ENST00000516211 143 ntBASIC3.29□□□□□ -1.88
LTBRP36941 SCARNA17.2-201ENST00000516334 143 ntBASIC3.29□□□□□ -1.88
LTBRP36941 AC024405.2-202ENST00000532731 184 ntBASIC3.29□□□□□ -1.88
LTBRP36941 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.29□□□□□ -1.88
LTBRP36941 MIR3145-201ENST00000580727 82 ntBASIC3.29□□□□□ -1.88
LTBRP36941 AC008739.2-201ENST00000597006 317 ntBASIC3.29□□□□□ -1.88
LTBRP36941 AL365434.2-201ENST00000607979 234 ntBASIC3.29□□□□□ -1.88
LTBRP36941 SCARNA17.4-201ENST00000614296 143 ntBASIC3.29□□□□□ -1.88
LTBRP36941 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.29□□□□□ -1.88
LTBRP36941 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.29□□□□□ -1.88
LTBRP36941 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LTBRP36941 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
LTBRP36941 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LTBRP36941 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LTBRP36941 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LTBRP36941 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.28□□□□□ -1.88
LTBRP36941 RNU1-75P-201ENST00000347264 129 ntBASIC3.28□□□□□ -1.88
LTBRP36941 Y_RNA.150-201ENST00000363562 102 ntBASIC3.28□□□□□ -1.88
LTBRP36941 RNA5SP322-201ENST00000363617 119 ntBASIC3.28□□□□□ -1.88
LTBRP36941 Y_RNA.270-201ENST00000364693 104 ntBASIC3.28□□□□□ -1.88
LTBRP36941 RNY4P28-201ENST00000365281 93 ntBASIC3.28□□□□□ -1.88
LTBRP36941 RNU6-1062P-201ENST00000383908 107 ntBASIC3.28□□□□□ -1.88
LTBRP36941 RNU6-1083P-201ENST00000384022 107 ntBASIC3.28□□□□□ -1.88
LTBRP36941 RNU6-662P-201ENST00000384253 104 ntBASIC3.28□□□□□ -1.88
LTBRP36941 RNU6-1289P-201ENST00000384431 106 ntBASIC3.28□□□□□ -1.88
LTBRP36941 RNA5SP184-201ENST00000411071 108 ntBASIC3.28□□□□□ -1.88
LTBRP36941 Y_RNA.626-201ENST00000411288 95 ntBASIC3.28□□□□□ -1.88
LTBRP36941 AC105272.1-201ENST00000438604 198 ntBASIC3.28□□□□□ -1.88
LTBRP36941 RPL31P41-201ENST00000477967 372 ntBASIC3.28□□□□□ -1.88
LTBRP36941 RAC1P5-201ENST00000512182 576 ntBASIC3.28□□□□□ -1.88
LTBRP36941 MIR2114-201ENST00000516645 80 ntBASIC3.28□□□□□ -1.88
LTBRP36941 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.28□□□□□ -1.88
LTBRP36941 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LTBRP36941 uc_338.25-201ENST00000613756 156 ntBASIC3.28□□□□□ -1.88
LTBRP36941 AC090517.3-201ENST00000625170 141 ntBASIC3.28□□□□□ -1.88
LTBRP36941 AC068205.3-201ENST00000636385 468 ntBASIC3.28□□□□□ -1.88
LTBRP36941 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LTBRP36941 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LTBRP36941 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LTBRP36941 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LTBRP36941 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
LTBRP36941 RNU4-80P-201ENST00000363200 141 ntBASIC3.27□□□□□ -1.89
LTBRP36941 RNU1-89P-201ENST00000384592 164 ntBASIC3.27□□□□□ -1.89
LTBRP36941 RNA5SP504-201ENST00000410676 117 ntBASIC3.27□□□□□ -1.89
LTBRP36941 AC009963.1-201ENST00000417265 157 ntBASIC3.27□□□□□ -1.89
LTBRP36941 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.27□□□□□ -1.89
LTBRP36941 AL121890.1-201ENST00000435457 205 ntBASIC3.27□□□□□ -1.89
LTBRP36941 AL109933.2-201ENST00000452651 260 ntBASIC3.27□□□□□ -1.89
LTBRP36941 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.27□□□□□ -1.89
LTBRP36941 COX6CP14-201ENST00000469580 174 ntBASIC3.27□□□□□ -1.89
LTBRP36941 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.27□□□□□ -1.89
LTBRP36941 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.27□□□□□ -1.89
LTBRP36941 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.27□□□□□ -1.89
LTBRP36941 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.27□□□□□ -1.89
LTBRP36941 CBX3P4-201ENST00000538909 354 ntBASIC3.27□□□□□ -1.89
LTBRP36941 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.27□□□□□ -1.89
LTBRP36941 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.27□□□□□ -1.89
LTBRP36941 AC006380.1-201ENST00000603598 186 ntBASIC3.27□□□□□ -1.89
LTBRP36941 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.27□□□□□ -1.89
LTBRP36941 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LTBRP36941 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LTBRP36941 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.27□□□□□ -1.89
LTBRP36941 AC017071.1-201ENST00000564407 2204 ntBASIC3.27□□□□□ -1.89
LTBRP36941 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.27□□□□□ -1.89
LTBRP36941 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.27□□□□□ -1.89
LTBRP36941 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
LTBRP36941 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
LTBRP36941 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.26□□□□□ -1.89
LTBRP36941 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LTBRP36941 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LTBRP36941 Y_RNA.82-201ENST00000363000 102 ntBASIC3.26□□□□□ -1.89
LTBRP36941 Y_RNA.92-201ENST00000363043 102 ntBASIC3.26□□□□□ -1.89
LTBRP36941 Y_RNA.235-201ENST00000364412 102 ntBASIC3.26□□□□□ -1.89
LTBRP36941 Y_RNA.306-201ENST00000365015 102 ntBASIC3.26□□□□□ -1.89
LTBRP36941 Y_RNA.312-201ENST00000365089 102 ntBASIC3.26□□□□□ -1.89
LTBRP36941 Y_RNA.322-201ENST00000365151 102 ntBASIC3.26□□□□□ -1.89
LTBRP36941 CD24P4-201ENST00000382840 243 ntBASIC3.26□□□□□ -1.89
LTBRP36941 SNORD15B-201ENST00000384714 146 ntBASIC3.26□□□□□ -1.89
LTBRP36941 Y_RNA.650-201ENST00000459002 102 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms