Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MIR337-201ENST00000362281 93 ntBASIC1.33□□□□□ -2.2
RORAP35398 RNU6-545P-201ENST00000362681 104 ntBASIC1.33□□□□□ -2.2
RORAP35398 Y_RNA.327-201ENST00000365201 102 ntBASIC1.33□□□□□ -2.2
RORAP35398 RNU6-259P-201ENST00000383999 107 ntBASIC1.33□□□□□ -2.2
RORAP35398 RNU6-1093P-201ENST00000391194 107 ntBASIC1.33□□□□□ -2.2
RORAP35398 AL117342.1-201ENST00000404861 406 ntBASIC1.33□□□□□ -2.2
RORAP35398 RPL21P111-201ENST00000418453 477 ntBASIC1.33□□□□□ -2.2
RORAP35398 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.33□□□□□ -2.2
RORAP35398 USP9YP28-201ENST00000435142 589 ntBASIC1.33□□□□□ -2.2
RORAP35398 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.33□□□□□ -2.2
RORAP35398 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.33□□□□□ -2.2
RORAP35398 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.33□□□□□ -2.2
RORAP35398 AL359672.1-201ENST00000442302 409 ntBASIC1.33□□□□□ -2.2
RORAP35398 AC007395.1-201ENST00000451333 677 ntBASIC1.33□□□□□ -2.2
RORAP35398 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.33□□□□□ -2.2
RORAP35398 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.33□□□□□ -2.2
RORAP35398 RPS23P5-201ENST00000495419 428 ntBASIC1.33□□□□□ -2.2
RORAP35398 AC091435.1-201ENST00000505442 584 ntBASIC1.33□□□□□ -2.2
RORAP35398 SNORA19.2-201ENST00000516013 114 ntBASIC1.33□□□□□ -2.2
RORAP35398 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.33□□□□□ -2.2
RORAP35398 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.33□□□□□ -2.2
RORAP35398 AC016256.1-201ENST00000547971 354 ntBASIC1.33□□□□□ -2.2
RORAP35398 AC016727.2-201ENST00000603988 621 ntBASIC1.33□□□□□ -2.2
RORAP35398 RMST_3.1-201ENST00000611651 109 ntBASIC1.33□□□□□ -2.2
RORAP35398 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.33□□□□□ -2.2
RORAP35398 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.33□□□□□ -2.2
RORAP35398 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.33□□□□□ -2.2
RORAP35398 AL359880.1-201ENST00000621879 266 ntBASIC1.33□□□□□ -2.2
RORAP35398 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.33□□□□□ -2.2
RORAP35398 FER-210ENST00000628534 558 ntTSL 5 BASIC1.33□□□□□ -2.2
RORAP35398 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
RORAP35398 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
RORAP35398 RNU1-62P-201ENST00000362599 164 ntBASIC1.32□□□□□ -2.2
RORAP35398 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
RORAP35398 MIR549A-201ENST00000385268 96 ntBASIC1.32□□□□□ -2.2
RORAP35398 MTCO3P40-201ENST00000392516 676 ntBASIC1.32□□□□□ -2.2
RORAP35398 MIR1267-201ENST00000408723 78 ntBASIC1.32□□□□□ -2.2
RORAP35398 RNA5SP247-201ENST00000411181 105 ntBASIC1.32□□□□□ -2.2
RORAP35398 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.32□□□□□ -2.2
RORAP35398 MTCO1P20-201ENST00000425366 358 ntBASIC1.32□□□□□ -2.2
RORAP35398 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.32□□□□□ -2.2
RORAP35398 MTND1P29-201ENST00000448112 647 ntBASIC1.32□□□□□ -2.2
RORAP35398 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.32□□□□□ -2.2
RORAP35398 AF186996.7-201ENST00000492781 209 ntBASIC1.32□□□□□ -2.2
RORAP35398 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.32□□□□□ -2.2
RORAP35398 RNA5SP437-201ENST00000517249 129 ntBASIC1.32□□□□□ -2.2
RORAP35398 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.32□□□□□ -2.2
RORAP35398 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.32□□□□□ -2.2
RORAP35398 CPDP1-201ENST00000579660 283 ntBASIC1.32□□□□□ -2.2
RORAP35398 AC083806.3-201ENST00000614016 455 ntBASIC1.32□□□□□ -2.2
RORAP35398 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.32□□□□□ -2.2
RORAP35398 AL158209.2-201ENST00000619266 216 ntBASIC1.32□□□□□ -2.2
RORAP35398 AC124864.2-201ENST00000624736 186 ntBASIC1.32□□□□□ -2.2
RORAP35398 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.32□□□□□ -2.2
RORAP35398 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.32□□□□□ -2.2
RORAP35398 AL159152.1-201ENST00000635019 2587 ntBASIC1.31□□□□□ -2.2
RORAP35398 AC121333.1-201ENST00000567488 2709 ntBASIC1.31□□□□□ -2.2
RORAP35398 RNU6-862P-201ENST00000362804 105 ntBASIC1.31□□□□□ -2.2
RORAP35398 RNU6-1286P-201ENST00000383871 107 ntBASIC1.31□□□□□ -2.2
RORAP35398 MIR450B-201ENST00000401182 78 ntBASIC1.31□□□□□ -2.2
RORAP35398 RNU6-1068P-201ENST00000410958 103 ntBASIC1.31□□□□□ -2.2
RORAP35398 RNU6-325P-201ENST00000411132 105 ntBASIC1.31□□□□□ -2.2
RORAP35398 C8orf59P1-201ENST00000429930 303 ntBASIC1.31□□□□□ -2.2
RORAP35398 AC245517.4-201ENST00000448601 281 ntBASIC1.31□□□□□ -2.2
RORAP35398 ATP5J2P3-201ENST00000451550 258 ntBASIC1.31□□□□□ -2.2
RORAP35398 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.31□□□□□ -2.2
RORAP35398 HMGN2P9-201ENST00000476875 229 ntBASIC1.31□□□□□ -2.2
RORAP35398 AC091885.1-201ENST00000506658 268 ntBASIC1.31□□□□□ -2.2
RORAP35398 Y_RNA.693-201ENST00000516641 110 ntBASIC1.31□□□□□ -2.2
RORAP35398 RNU6-856P-201ENST00000516959 98 ntBASIC1.31□□□□□ -2.2
RORAP35398 SNORA77B-201ENST00000578179 125 ntBASIC1.31□□□□□ -2.2
RORAP35398 AC069114.2-201ENST00000604699 304 ntBASIC1.31□□□□□ -2.2
RORAP35398 OR5AK4P-201ENST00000635912 903 ntBASIC1.31□□□□□ -2.2
RORAP35398 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
RORAP35398 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.31□□□□□ -2.2
RORAP35398 RNU6-562P-201ENST00000362731 107 ntBASIC1.3□□□□□ -2.2
RORAP35398 Y_RNA.123-201ENST00000363338 102 ntBASIC1.3□□□□□ -2.2
RORAP35398 RNU6-418P-201ENST00000384035 107 ntBASIC1.3□□□□□ -2.2
RORAP35398 MIR548B-201ENST00000385247 97 ntBASIC1.3□□□□□ -2.2
RORAP35398 RPS26P42-201ENST00000413485 326 ntBASIC1.3□□□□□ -2.2
RORAP35398 AC060773.1-201ENST00000421698 310 ntBASIC1.3□□□□□ -2.2
RORAP35398 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.3□□□□□ -2.2
RORAP35398 UBE2V1P8-201ENST00000437166 265 ntBASIC1.3□□□□□ -2.2
RORAP35398 U8.21-201ENST00000459536 136 ntBASIC1.3□□□□□ -2.2
RORAP35398 AC083904.1-201ENST00000487828 231 ntBASIC1.3□□□□□ -2.2
RORAP35398 AC019235.1-201ENST00000503847 207 ntBASIC1.3□□□□□ -2.2
RORAP35398 RNA5SP445-201ENST00000515889 115 ntBASIC1.3□□□□□ -2.2
RORAP35398 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.3□□□□□ -2.2
RORAP35398 HMGB1P33-201ENST00000563485 527 ntBASIC1.3□□□□□ -2.2
RORAP35398 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.3□□□□□ -2.2
RORAP35398 PIGPP4-201ENST00000584447 307 ntBASIC1.3□□□□□ -2.2
RORAP35398 RNU6-89P-201ENST00000606519 100 ntBASIC1.3□□□□□ -2.2
RORAP35398 AC092954.2-201ENST00000609103 430 ntBASIC1.3□□□□□ -2.2
RORAP35398 AL157834.3-201ENST00000615543 103 ntBASIC1.3□□□□□ -2.2
RORAP35398 MIR8070-201ENST00000616510 88 ntBASIC1.3□□□□□ -2.2
RORAP35398 AL353770.2-201ENST00000620024 78 ntBASIC1.3□□□□□ -2.2
RORAP35398 AL121890.5-201ENST00000620848 304 ntBASIC1.3□□□□□ -2.2
RORAP35398 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.3□□□□□ -2.2
RORAP35398 Y_RNA.132-201ENST00000363421 102 ntBASIC1.29□□□□□ -2.2
RORAP35398 RNU6-1085P-201ENST00000363576 107 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms