Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC106800.4-201ENST00000614905 153 ntBASIC0.75□□□□□ -2.29
RPA3P35244 Y_RNA.560-201ENST00000384689 102 ntBASIC0.74□□□□□ -2.29
RPA3P35244 RNU6-1031P-201ENST00000384773 107 ntBASIC0.74□□□□□ -2.29
RPA3P35244 RNU6-910P-201ENST00000390844 107 ntBASIC0.74□□□□□ -2.29
RPA3P35244 RNA5SP323-201ENST00000391094 133 ntBASIC0.74□□□□□ -2.29
RPA3P35244 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.74□□□□□ -2.29
RPA3P35244 RNU6-584P-201ENST00000410350 95 ntBASIC0.74□□□□□ -2.29
RPA3P35244 POLR2J4-204ENST00000418424 324 ntBASIC0.74□□□□□ -2.29
RPA3P35244 AC013410.2-201ENST00000422627 201 ntBASIC0.74□□□□□ -2.29
RPA3P35244 AC004941.2-201ENST00000427009 228 ntBASIC0.74□□□□□ -2.29
RPA3P35244 TIMM9P3-201ENST00000428659 274 ntBASIC0.74□□□□□ -2.29
RPA3P35244 SNORD124-201ENST00000459577 104 ntBASIC0.74□□□□□ -2.29
RPA3P35244 AC092991.1-201ENST00000477176 376 ntBASIC0.74□□□□□ -2.29
RPA3P35244 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.74□□□□□ -2.29
RPA3P35244 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.74□□□□□ -2.29
RPA3P35244 SNORA31.2-201ENST00000516019 134 ntBASIC0.74□□□□□ -2.29
RPA3P35244 SNORA31.10-201ENST00000516482 106 ntBASIC0.74□□□□□ -2.29
RPA3P35244 AC069113.1-201ENST00000517763 267 ntBASIC0.74□□□□□ -2.29
RPA3P35244 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.74□□□□□ -2.29
RPA3P35244 AC005014.3-201ENST00000605985 190 ntBASIC0.74□□□□□ -2.29
RPA3P35244 uc_338.11-201ENST00000619132 160 ntBASIC0.74□□□□□ -2.29
RPA3P35244 RNU1-36P-201ENST00000365130 165 ntBASIC0.73□□□□□ -2.29
RPA3P35244 MIR19B1-201ENST00000384829 87 ntBASIC0.73□□□□□ -2.29
RPA3P35244 AC004866.1-201ENST00000411748 78 ntBASIC0.73□□□□□ -2.29
RPA3P35244 Z99497.1-201ENST00000421282 135 ntBASIC0.73□□□□□ -2.29
RPA3P35244 RAB28P5-201ENST00000427490 651 ntBASIC0.73□□□□□ -2.29
RPA3P35244 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.73□□□□□ -2.29
RPA3P35244 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.73□□□□□ -2.29
RPA3P35244 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.73□□□□□ -2.29
RPA3P35244 NFU1P2-201ENST00000448700 469 ntBASIC0.73□□□□□ -2.29
RPA3P35244 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
RPA3P35244 SNORD11.1-201ENST00000459482 85 ntBASIC0.73□□□□□ -2.29
RPA3P35244 AC048334.1-201ENST00000477975 159 ntBASIC0.73□□□□□ -2.29
RPA3P35244 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.73□□□□□ -2.29
RPA3P35244 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.73□□□□□ -2.29
RPA3P35244 RNU6-1146P-201ENST00000516282 102 ntBASIC0.73□□□□□ -2.29
RPA3P35244 RN7SKP49-201ENST00000516675 260 ntBASIC0.73□□□□□ -2.29
RPA3P35244 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.73□□□□□ -2.29
RPA3P35244 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
RPA3P35244 MIR5695-201ENST00000579717 85 ntBASIC0.73□□□□□ -2.29
RPA3P35244 AC092354.1-201ENST00000606057 376 ntBASIC0.73□□□□□ -2.29
RPA3P35244 AC018630.2-201ENST00000534866 2403 ntBASIC0.73□□□□□ -2.29
RPA3P35244 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
RPA3P35244 RNU6-282P-201ENST00000365357 103 ntBASIC0.72□□□□□ -2.29
RPA3P35244 SNORD73A-201ENST00000386062 65 ntBASIC0.72□□□□□ -2.29
RPA3P35244 SNORA40.3-201ENST00000390964 122 ntBASIC0.72□□□□□ -2.29
RPA3P35244 MIR1253-201ENST00000408273 105 ntBASIC0.72□□□□□ -2.29
RPA3P35244 AC114482.1-201ENST00000418010 247 ntBASIC0.72□□□□□ -2.29
RPA3P35244 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.72□□□□□ -2.29
RPA3P35244 RPS29P1-201ENST00000465274 159 ntBASIC0.72□□□□□ -2.29
RPA3P35244 AC024995.1-201ENST00000523014 93 ntBASIC0.72□□□□□ -2.29
RPA3P35244 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.72□□□□□ -2.29
RPA3P35244 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.72□□□□□ -2.29
RPA3P35244 AC097065.2-201ENST00000608159 533 ntBASIC0.72□□□□□ -2.29
RPA3P35244 TCL6_2.1-201ENST00000615162 119 ntBASIC0.72□□□□□ -2.29
RPA3P35244 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.72□□□□□ -2.29
RPA3P35244 RNU4-79P-201ENST00000362764 141 ntBASIC0.71□□□□□ -2.3
RPA3P35244 RNU6-456P-201ENST00000384493 107 ntBASIC0.71□□□□□ -2.3
RPA3P35244 RNU6-950P-201ENST00000384651 107 ntBASIC0.71□□□□□ -2.3
RPA3P35244 RNU6-57P-201ENST00000411348 103 ntBASIC0.71□□□□□ -2.3
RPA3P35244 MTND5P15-201ENST00000434246 349 ntBASIC0.71□□□□□ -2.3
RPA3P35244 MTCO2P3-201ENST00000442543 421 ntBASIC0.71□□□□□ -2.3
RPA3P35244 MTCO3P8-201ENST00000453691 755 ntBASIC0.71□□□□□ -2.3
RPA3P35244 RNU7-167P-201ENST00000459160 62 ntBASIC0.71□□□□□ -2.3
RPA3P35244 AC105417.1-201ENST00000514691 285 ntBASIC0.71□□□□□ -2.3
RPA3P35244 RNA5SP168-201ENST00000516642 112 ntBASIC0.71□□□□□ -2.3
RPA3P35244 RNU6-922P-201ENST00000516753 99 ntBASIC0.71□□□□□ -2.3
RPA3P35244 AC026470.2-201ENST00000561492 181 ntBASIC0.71□□□□□ -2.3
RPA3P35244 MIR5583-1-201ENST00000580941 59 ntBASIC0.71□□□□□ -2.3
RPA3P35244 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.71□□□□□ -2.3
RPA3P35244 AP001506.1-201ENST00000615444 211 ntBASIC0.71□□□□□ -2.3
RPA3P35244 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
RPA3P35244 AC106754.2-201ENST00000623006 233 ntBASIC0.71□□□□□ -2.3
RPA3P35244 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
RPA3P35244 RNU6-1305P-201ENST00000364353 104 ntBASIC0.7□□□□□ -2.3
RPA3P35244 Y_RNA.399-201ENST00000383955 105 ntBASIC0.7□□□□□ -2.3
RPA3P35244 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
RPA3P35244 AC006461.1-201ENST00000412637 326 ntBASIC0.7□□□□□ -2.3
RPA3P35244 AC016909.1-201ENST00000415916 166 ntBASIC0.7□□□□□ -2.3
RPA3P35244 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.7□□□□□ -2.3
RPA3P35244 AC063976.4-201ENST00000421971 163 ntBASIC0.7□□□□□ -2.3
RPA3P35244 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.7□□□□□ -2.3
RPA3P35244 AC002429.1-201ENST00000437672 148 ntBASIC0.7□□□□□ -2.3
RPA3P35244 GMFBP1-201ENST00000467831 427 ntBASIC0.7□□□□□ -2.3
RPA3P35244 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.7□□□□□ -2.3
RPA3P35244 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
RPA3P35244 SNORA31.4-201ENST00000516049 129 ntBASIC0.7□□□□□ -2.3
RPA3P35244 RNU6-612P-201ENST00000516909 102 ntBASIC0.7□□□□□ -2.3
RPA3P35244 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.7□□□□□ -2.3
RPA3P35244 CYP3A137P-201ENST00000562436 69 ntBASIC0.7□□□□□ -2.3
RPA3P35244 AL390123.1-201ENST00000603216 237 ntBASIC0.7□□□□□ -2.3
RPA3P35244 AP000907.4-201ENST00000604143 237 ntBASIC0.7□□□□□ -2.3
RPA3P35244 AC022217.4-201ENST00000604389 163 ntBASIC0.7□□□□□ -2.3
RPA3P35244 AL359697.1-201ENST00000624879 587 ntBASIC0.7□□□□□ -2.3
RPA3P35244 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
RPA3P35244 Y_RNA.124-201ENST00000363339 93 ntBASIC0.69□□□□□ -2.3
RPA3P35244 Y_RNA.224-201ENST00000364308 111 ntBASIC0.69□□□□□ -2.3
RPA3P35244 RNU6-505P-201ENST00000384427 107 ntBASIC0.69□□□□□ -2.3
RPA3P35244 RNU2-9P-201ENST00000410194 145 ntBASIC0.69□□□□□ -2.3
RPA3P35244 BX295541.1-201ENST00000417774 250 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms