Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.74□□□□□ -2.13
USP6P35125 UBE2V1P4-201ENST00000425374 344 ntBASIC1.74□□□□□ -2.13
USP6P35125 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.74□□□□□ -2.13
USP6P35125 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.74□□□□□ -2.13
USP6P35125 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.74□□□□□ -2.13
USP6P35125 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.74□□□□□ -2.13
USP6P35125 HMGN2P26-201ENST00000463169 339 ntBASIC1.74□□□□□ -2.13
USP6P35125 AC093259.1-201ENST00000509755 300 ntBASIC1.74□□□□□ -2.13
USP6P35125 PTP4A1P4-201ENST00000512479 322 ntBASIC1.74□□□□□ -2.13
USP6P35125 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.74□□□□□ -2.13
USP6P35125 FAM106DP-201ENST00000586416 501 ntBASIC1.74□□□□□ -2.13
USP6P35125 Z98751.3-201ENST00000604447 521 ntBASIC1.74□□□□□ -2.13
USP6P35125 AL360085.1-201ENST00000604713 532 ntBASIC1.74□□□□□ -2.13
USP6P35125 PCGEM1.1-201ENST00000613431 131 ntBASIC1.74□□□□□ -2.13
USP6P35125 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.74□□□□□ -2.13
USP6P35125 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.74□□□□□ -2.13
USP6P35125 Y_RNA.89-201ENST00000363031 102 ntBASIC1.73□□□□□ -2.13
USP6P35125 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
USP6P35125 SNORD115-47-201ENST00000391226 86 ntBASIC1.73□□□□□ -2.13
USP6P35125 RNU6-325P-201ENST00000411132 105 ntBASIC1.73□□□□□ -2.13
USP6P35125 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.73□□□□□ -2.13
USP6P35125 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.73□□□□□ -2.13
USP6P35125 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.73□□□□□ -2.13
USP6P35125 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.73□□□□□ -2.13
USP6P35125 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.73□□□□□ -2.13
USP6P35125 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.73□□□□□ -2.13
USP6P35125 MIR4529-201ENST00000578110 78 ntBASIC1.73□□□□□ -2.13
USP6P35125 CPDP1-201ENST00000579660 283 ntBASIC1.73□□□□□ -2.13
USP6P35125 AC007229.1-201ENST00000590455 412 ntBASIC1.73□□□□□ -2.13
USP6P35125 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.73□□□□□ -2.13
USP6P35125 U4.5-201ENST00000617137 123 ntBASIC1.73□□□□□ -2.13
USP6P35125 AC068137.4-201ENST00000638485 296 ntBASIC1.73□□□□□ -2.13
USP6P35125 SNORD113-7-201ENST00000363762 77 ntBASIC1.72□□□□□ -2.13
USP6P35125 RNU6-26P-201ENST00000383985 107 ntBASIC1.72□□□□□ -2.13
USP6P35125 Y_RNA.453-201ENST00000384223 109 ntBASIC1.72□□□□□ -2.13
USP6P35125 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.72□□□□□ -2.13
USP6P35125 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.72□□□□□ -2.13
USP6P35125 USP9YP28-201ENST00000435142 589 ntBASIC1.72□□□□□ -2.13
USP6P35125 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.72□□□□□ -2.13
USP6P35125 HMGN2P18-201ENST00000450680 270 ntBASIC1.72□□□□□ -2.13
USP6P35125 U8.21-201ENST00000459536 136 ntBASIC1.72□□□□□ -2.13
USP6P35125 AC092989.1-201ENST00000481235 277 ntBASIC1.72□□□□□ -2.13
USP6P35125 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.72□□□□□ -2.13
USP6P35125 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.72□□□□□ -2.13
USP6P35125 FAM206BP-201ENST00000510179 541 ntBASIC1.72□□□□□ -2.13
USP6P35125 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.72□□□□□ -2.13
USP6P35125 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.72□□□□□ -2.13
USP6P35125 AC021231.3-201ENST00000558497 370 ntBASIC1.72□□□□□ -2.13
USP6P35125 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.72□□□□□ -2.13
USP6P35125 AC068790.6-201ENST00000602558 258 ntBASIC1.72□□□□□ -2.13
USP6P35125 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USP6P35125 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USP6P35125 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
USP6P35125 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.71□□□□□ -2.14
USP6P35125 RNU6-534P-201ENST00000364877 106 ntBASIC1.71□□□□□ -2.14
USP6P35125 SNRPEP10-201ENST00000420249 274 ntBASIC1.71□□□□□ -2.14
USP6P35125 AC012306.1-201ENST00000423267 114 ntBASIC1.71□□□□□ -2.14
USP6P35125 AC096920.1-201ENST00000423991 241 ntBASIC1.71□□□□□ -2.14
USP6P35125 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.71□□□□□ -2.14
USP6P35125 MTND1P34-201ENST00000438556 671 ntBASIC1.71□□□□□ -2.14
USP6P35125 AC021146.2-201ENST00000504736 556 ntBASIC1.71□□□□□ -2.14
USP6P35125 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.71□□□□□ -2.14
USP6P35125 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.71□□□□□ -2.14
USP6P35125 MRPS36P4-201ENST00000534436 298 ntBASIC1.71□□□□□ -2.14
USP6P35125 CYP4A27P-201ENST00000567218 190 ntBASIC1.71□□□□□ -2.14
USP6P35125 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.71□□□□□ -2.14
USP6P35125 AC005730.3-201ENST00000583067 366 ntBASIC1.71□□□□□ -2.14
USP6P35125 MIR3672-201ENST00000584290 82 ntBASIC1.71□□□□□ -2.14
USP6P35125 AC090517.2-201ENST00000614966 680 ntBASIC1.71□□□□□ -2.14
USP6P35125 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.71□□□□□ -2.14
USP6P35125 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.71□□□□□ -2.14
USP6P35125 AC073869.6-201ENST00000640656 341 ntBASIC1.71□□□□□ -2.14
USP6P35125 MTND5P10-201ENST00000603719 1809 ntBASIC1.7□□□□□ -2.14
USP6P35125 Y_RNA.123-201ENST00000363338 102 ntBASIC1.7□□□□□ -2.14
USP6P35125 U3.9-201ENST00000363823 204 ntBASIC1.7□□□□□ -2.14
USP6P35125 RNU6-877P-201ENST00000383868 107 ntBASIC1.7□□□□□ -2.14
USP6P35125 SNORA29-201ENST00000384183 140 ntBASIC1.7□□□□□ -2.14
USP6P35125 Y_RNA.530-201ENST00000384587 101 ntBASIC1.7□□□□□ -2.14
USP6P35125 SNORA40.19-201ENST00000390846 128 ntBASIC1.7□□□□□ -2.14
USP6P35125 RNU2-41P-201ENST00000410991 178 ntBASIC1.7□□□□□ -2.14
USP6P35125 RNU6-373P-201ENST00000411247 98 ntBASIC1.7□□□□□ -2.14
USP6P35125 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.7□□□□□ -2.14
USP6P35125 RNU7-187P-201ENST00000458985 68 ntBASIC1.7□□□□□ -2.14
USP6P35125 RNU7-66P-201ENST00000459469 62 ntBASIC1.7□□□□□ -2.14
USP6P35125 AC007547.1-201ENST00000462177 490 ntBASIC1.7□□□□□ -2.14
USP6P35125 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.7□□□□□ -2.14
USP6P35125 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.7□□□□□ -2.14
USP6P35125 RNU6-718P-201ENST00000516166 105 ntBASIC1.7□□□□□ -2.14
USP6P35125 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.7□□□□□ -2.14
USP6P35125 EIF4A1P12-201ENST00000551910 141 ntBASIC1.7□□□□□ -2.14
USP6P35125 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.7□□□□□ -2.14
USP6P35125 AC073413.2-201ENST00000604332 360 ntBASIC1.7□□□□□ -2.14
USP6P35125 AP000654.2-201ENST00000605633 586 ntBASIC1.7□□□□□ -2.14
USP6P35125 AC090617.10-201ENST00000624308 134 ntBASIC1.7□□□□□ -2.14
USP6P35125 MIR3688-2-201ENST00000636963 87 ntBASIC1.7□□□□□ -2.14
USP6P35125 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
USP6P35125 ZNF702P-202ENST00000434269 1966 ntBASIC1.69□□□□□ -2.14
USP6P35125 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
USP6P35125 Y_RNA.6-201ENST00000362350 114 ntBASIC1.69□□□□□ -2.14
USP6P35125 RNA5SP276-201ENST00000362580 94 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms