Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 HSBP1P1-201ENST00000555205 166 ntBASIC2.65□□□□□ -1.99
CIITAP33076 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.65□□□□□ -1.99
CIITAP33076 VN1R91P-201ENST00000594377 169 ntBASIC2.65□□□□□ -1.99
CIITAP33076 AC100812.1-201ENST00000607622 580 ntBASIC2.65□□□□□ -1.99
CIITAP33076 RMST_6.1-201ENST00000611980 203 ntBASIC2.65□□□□□ -1.99
CIITAP33076 AC007792.1-201ENST00000623023 402 ntBASIC2.65□□□□□ -1.99
CIITAP33076 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.65□□□□□ -1.99
CIITAP33076 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CIITAP33076 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.65□□□□□ -1.99
CIITAP33076 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CIITAP33076 RNU6-222P-201ENST00000362438 107 ntBASIC2.64□□□□□ -1.99
CIITAP33076 U3.13-201ENST00000364804 214 ntBASIC2.64□□□□□ -1.99
CIITAP33076 RNU6-142P-201ENST00000384019 107 ntBASIC2.64□□□□□ -1.99
CIITAP33076 RNU6-220P-201ENST00000390919 107 ntBASIC2.64□□□□□ -1.99
CIITAP33076 Y_RNA.605-201ENST00000410577 105 ntBASIC2.64□□□□□ -1.99
CIITAP33076 OOSP1P1-201ENST00000423265 274 ntBASIC2.64□□□□□ -1.99
CIITAP33076 AC112771.1-201ENST00000463581 102 ntBASIC2.64□□□□□ -1.99
CIITAP33076 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.64□□□□□ -1.99
CIITAP33076 ANXA2P1-201ENST00000505539 926 ntBASIC2.64□□□□□ -1.99
CIITAP33076 RNU6-911P-201ENST00000516523 104 ntBASIC2.64□□□□□ -1.99
CIITAP33076 SNORA31.15-201ENST00000516771 132 ntBASIC2.64□□□□□ -1.99
CIITAP33076 AC109329.1-201ENST00000518744 317 ntBASIC2.64□□□□□ -1.99
CIITAP33076 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.64□□□□□ -1.99
CIITAP33076 AC027288.2-201ENST00000553028 243 ntBASIC2.64□□□□□ -1.99
CIITAP33076 MIR3945-201ENST00000581853 98 ntBASIC2.64□□□□□ -1.99
CIITAP33076 Z98751.3-201ENST00000604447 521 ntBASIC2.64□□□□□ -1.99
CIITAP33076 MTND5P16-201ENST00000460269 1703 ntBASIC2.64□□□□□ -1.99
CIITAP33076 Z75746.1-201ENST00000440243 2080 ntBASIC2.64□□□□□ -1.99
CIITAP33076 OR56A5-201ENST00000340110 738 ntBASIC2.63□□□□□ -1.99
CIITAP33076 SNORD114-19-201ENST00000363072 75 ntBASIC2.63□□□□□ -1.99
CIITAP33076 RNU6-1309P-201ENST00000363305 108 ntBASIC2.63□□□□□ -1.99
CIITAP33076 Y_RNA.389-201ENST00000383924 113 ntBASIC2.63□□□□□ -1.99
CIITAP33076 RNU1-138P-201ENST00000384093 164 ntBASIC2.63□□□□□ -1.99
CIITAP33076 MIR218-1-201ENST00000384999 110 ntBASIC2.63□□□□□ -1.99
CIITAP33076 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CIITAP33076 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.63□□□□□ -1.99
CIITAP33076 AL590135.1-201ENST00000422215 156 ntBASIC2.63□□□□□ -1.99
CIITAP33076 AC019205.3-201ENST00000424573 156 ntBASIC2.63□□□□□ -1.99
CIITAP33076 RPL30P4-201ENST00000429309 333 ntBASIC2.63□□□□□ -1.99
CIITAP33076 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.63□□□□□ -1.99
CIITAP33076 AC016700.2-201ENST00000446011 156 ntBASIC2.63□□□□□ -1.99
CIITAP33076 AC010655.3-201ENST00000478818 450 ntBASIC2.63□□□□□ -1.99
CIITAP33076 AC015911.1-201ENST00000495111 156 ntBASIC2.63□□□□□ -1.99
CIITAP33076 HMGB1P35-201ENST00000503360 598 ntBASIC2.63□□□□□ -1.99
CIITAP33076 AC093852.1-201ENST00000503587 266 ntBASIC2.63□□□□□ -1.99
CIITAP33076 SNORA25.11-201ENST00000515935 105 ntBASIC2.63□□□□□ -1.99
CIITAP33076 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.63□□□□□ -1.99
CIITAP33076 Y_RNA.706-201ENST00000516933 99 ntBASIC2.63□□□□□ -1.99
CIITAP33076 AC022616.4-201ENST00000522985 181 ntBASIC2.63□□□□□ -1.99
CIITAP33076 AC040926.1-201ENST00000530195 238 ntBASIC2.63□□□□□ -1.99
CIITAP33076 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.63□□□□□ -1.99
CIITAP33076 AP002770.2-201ENST00000543613 532 ntBASIC2.63□□□□□ -1.99
CIITAP33076 AC021231.3-201ENST00000558497 370 ntBASIC2.63□□□□□ -1.99
CIITAP33076 SNORD53-201ENST00000579969 78 ntBASIC2.63□□□□□ -1.99
CIITAP33076 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.63□□□□□ -1.99
CIITAP33076 AC016727.2-201ENST00000603988 621 ntBASIC2.63□□□□□ -1.99
CIITAP33076 SNORD98-201ENST00000636377 67 ntBASIC2.63□□□□□ -1.99
CIITAP33076 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CIITAP33076 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CIITAP33076 SNORD114-30-201ENST00000364448 72 ntBASIC2.62□□□□□ -1.99
CIITAP33076 SNORD14.1-201ENST00000365609 90 ntBASIC2.62□□□□□ -1.99
CIITAP33076 MIR186-201ENST00000384988 86 ntBASIC2.62□□□□□ -1.99
CIITAP33076 RNU2-63P-201ENST00000410792 194 ntBASIC2.62□□□□□ -1.99
CIITAP33076 AL590556.1-201ENST00000423231 483 ntBASIC2.62□□□□□ -1.99
CIITAP33076 AC012306.1-201ENST00000423267 114 ntBASIC2.62□□□□□ -1.99
CIITAP33076 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.62□□□□□ -1.99
CIITAP33076 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.62□□□□□ -1.99
CIITAP33076 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.62□□□□□ -1.99
CIITAP33076 RNU7-26P-201ENST00000458980 63 ntBASIC2.62□□□□□ -1.99
CIITAP33076 AP000870.1-201ENST00000472927 406 ntBASIC2.62□□□□□ -1.99
CIITAP33076 AC107032.1-201ENST00000485945 480 ntBASIC2.62□□□□□ -1.99
CIITAP33076 AC132942.1-201ENST00000486753 483 ntBASIC2.62□□□□□ -1.99
CIITAP33076 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.62□□□□□ -1.99
CIITAP33076 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.62□□□□□ -1.99
CIITAP33076 RNA5SP281-201ENST00000516504 135 ntBASIC2.62□□□□□ -1.99
CIITAP33076 Y_RNA.721-201ENST00000517207 102 ntBASIC2.62□□□□□ -1.99
CIITAP33076 AC115990.1-201ENST00000526957 301 ntBASIC2.62□□□□□ -1.99
CIITAP33076 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.62□□□□□ -1.99
CIITAP33076 AC105137.2-201ENST00000569073 466 ntBASIC2.62□□□□□ -1.99
CIITAP33076 AC124312.5-201ENST00000604451 268 ntBASIC2.62□□□□□ -1.99
CIITAP33076 AL049779.4-201ENST00000604500 156 ntBASIC2.62□□□□□ -1.99
CIITAP33076 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.62□□□□□ -1.99
CIITAP33076 AC008121.3-201ENST00000618726 433 ntBASIC2.62□□□□□ -1.99
CIITAP33076 AC010297.1-201ENST00000623948 149 ntBASIC2.62□□□□□ -1.99
CIITAP33076 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.62□□□□□ -1.99
CIITAP33076 FO624990.1-201ENST00000636373 85 ntBASIC2.62□□□□□ -1.99
CIITAP33076 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CIITAP33076 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CIITAP33076 RNU6-212P-201ENST00000362642 104 ntBASIC2.61□□□□□ -1.99
CIITAP33076 RNA5SP240-201ENST00000365355 128 ntBASIC2.61□□□□□ -1.99
CIITAP33076 MIR1252-201ENST00000408861 65 ntBASIC2.61□□□□□ -1.99
CIITAP33076 AC138623.1-201ENST00000418060 216 ntBASIC2.61□□□□□ -1.99
CIITAP33076 EIF1P2-201ENST00000428233 350 ntBASIC2.61□□□□□ -1.99
CIITAP33076 RPS15AP28-201ENST00000435088 386 ntBASIC2.61□□□□□ -1.99
CIITAP33076 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.61□□□□□ -1.99
CIITAP33076 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.61□□□□□ -1.99
CIITAP33076 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.61□□□□□ -1.99
CIITAP33076 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.61□□□□□ -1.99
CIITAP33076 CYP2C59P-201ENST00000457790 269 ntBASIC2.61□□□□□ -1.99
CIITAP33076 RNU7-87P-201ENST00000459343 62 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms