Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 Y_RNA.661-201ENST00000516003 99 ntBASIC2.32□□□□□ -2.04
HOXC8P31273 RNU6-699P-201ENST00000517081 110 ntBASIC2.32□□□□□ -2.04
HOXC8P31273 RNU6-264P-201ENST00000517134 104 ntBASIC2.32□□□□□ -2.04
HOXC8P31273 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC8P31273 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC8P31273 AC078899.2-201ENST00000595282 212 ntBASIC2.32□□□□□ -2.04
HOXC8P31273 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.32□□□□□ -2.04
HOXC8P31273 SNRPGP17-201ENST00000603780 214 ntBASIC2.32□□□□□ -2.04
HOXC8P31273 AC005014.2-201ENST00000607795 599 ntBASIC2.32□□□□□ -2.04
HOXC8P31273 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC8P31273 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXC8P31273 Y_RNA.5-201ENST00000362334 102 ntBASIC2.31□□□□□ -2.04
HOXC8P31273 Y_RNA.326-201ENST00000365176 113 ntBASIC2.31□□□□□ -2.04
HOXC8P31273 Y_RNA.463-201ENST00000384271 102 ntBASIC2.31□□□□□ -2.04
HOXC8P31273 SNORA26.9-201ENST00000391322 122 ntBASIC2.31□□□□□ -2.04
HOXC8P31273 EDDM3CP-201ENST00000415977 425 ntBASIC2.31□□□□□ -2.04
HOXC8P31273 EIF4EP2-201ENST00000422816 654 ntBASIC2.31□□□□□ -2.04
HOXC8P31273 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC8P31273 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC8P31273 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXC8P31273 AL137792.2-201ENST00000443484 235 ntBASIC2.31□□□□□ -2.04
HOXC8P31273 AL118496.2-201ENST00000448300 230 ntBASIC2.31□□□□□ -2.04
HOXC8P31273 AC079354.2-201ENST00000453523 154 ntBASIC2.31□□□□□ -2.04
HOXC8P31273 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.31□□□□□ -2.04
HOXC8P31273 RNA5SP82-201ENST00000516707 92 ntBASIC2.31□□□□□ -2.04
HOXC8P31273 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.31□□□□□ -2.04
HOXC8P31273 AL356575.1-201ENST00000603008 283 ntBASIC2.31□□□□□ -2.04
HOXC8P31273 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXC8P31273 RNU6-490P-201ENST00000362985 107 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 RNU6-99P-201ENST00000364721 107 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 SNORD32A-201ENST00000364805 84 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 RNU6-546P-201ENST00000383991 107 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 SNORD23.1-201ENST00000408212 104 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 RNU2-32P-201ENST00000411193 191 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXC8P31273 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXC8P31273 PMCHL1-202ENST00000423102 261 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 MRPS18CP6-201ENST00000423587 223 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HOXC8P31273 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXC8P31273 RPL23AP42-201ENST00000471152 471 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 AL163540.1-201ENST00000485382 386 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 RNU6-976P-201ENST00000516086 111 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 SCARNA15.1-201ENST00000516384 125 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 RNU7-193P-201ENST00000516723 65 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 Y_RNA.711-201ENST00000516993 102 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.3□□□□□ -2.04
HOXC8P31273 MRPS36P4-201ENST00000534436 298 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 AL442663.2-201ENST00000554385 511 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 MIR5002-201ENST00000584713 97 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 AC012640.5-201ENST00000623897 319 ntBASIC2.3□□□□□ -2.04
HOXC8P31273 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.3□□□□□ -2.04
HOXC8P31273 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HOXC8P31273 ZNF72P-201ENST00000425869 1908 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 ZNF299P-201ENST00000406845 1804 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
HOXC8P31273 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HOXC8P31273 snoU2_19.1-201ENST00000362361 80 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 Y_RNA.40-201ENST00000362645 93 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 RNY1P16-201ENST00000363063 111 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 RNU1-23P-201ENST00000363361 144 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 SNORA22B-201ENST00000383876 138 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 RNU6-784P-201ENST00000384330 106 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 RNU6-1274P-201ENST00000384557 107 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 AL590004.1-201ENST00000405321 300 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXC8P31273 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXC8P31273 RPL17P19-201ENST00000489069 552 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 AC105758.1-201ENST00000506038 399 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 AC034114.1-201ENST00000520293 285 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 HSPE1P4-201ENST00000550617 308 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 MIR5696-201ENST00000578474 85 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 AC022432.1-201ENST00000595739 310 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 Y_RNA.812-201ENST00000610788 101 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 Y_RNA.784-201ENST00000613803 101 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 AC040896.1-201ENST00000613819 479 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 Y_RNA.787-201ENST00000616522 101 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 Y_RNA.780-201ENST00000617336 101 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 Y_RNA.801-201ENST00000619005 101 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 AL159153.1-201ENST00000619688 317 ntBASIC2.29□□□□□ -2.04
HOXC8P31273 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
HOXC8P31273 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HOXC8P31273 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HOXC8P31273 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.28□□□□□ -2.04
HOXC8P31273 Y_RNA.112-201ENST00000363250 102 ntBASIC2.28□□□□□ -2.04
HOXC8P31273 RNU4-56P-201ENST00000364700 142 ntBASIC2.28□□□□□ -2.04
HOXC8P31273 SNORA6-201ENST00000384033 151 ntBASIC2.28□□□□□ -2.04
HOXC8P31273 Y_RNA.496-201ENST00000384444 101 ntBASIC2.28□□□□□ -2.04
HOXC8P31273 Y_RNA.504-201ENST00000384481 104 ntBASIC2.28□□□□□ -2.04
HOXC8P31273 AL035666.1-201ENST00000446195 348 ntBASIC2.28□□□□□ -2.04
HOXC8P31273 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.28□□□□□ -2.04
HOXC8P31273 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.28□□□□□ -2.04
HOXC8P31273 RNU6-295P-201ENST00000516901 104 ntBASIC2.28□□□□□ -2.04
HOXC8P31273 RN7SKP295-201ENST00000517264 153 ntBASIC2.28□□□□□ -2.04
HOXC8P31273 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.28□□□□□ -2.04
HOXC8P31273 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.28□□□□□ -2.04
HOXC8P31273 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXC8P31273 AL031274.2-201ENST00000599419 203 ntBASIC2.28□□□□□ -2.04
HOXC8P31273 MIR6845-201ENST00000613182 61 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 529.4 ms