Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC138649.3-201ENST00000622154 254 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 AC006927.3-201ENST00000638789 384 ntBASIC0.48□□□□□ -2.33
COL4A5P29400 RNU6-877P-201ENST00000383868 107 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 RNU6-906P-201ENST00000384700 70 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 RNU6-331P-201ENST00000384724 107 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 MTCYBP36-201ENST00000404146 440 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 Y_RNA.598-201ENST00000410480 95 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.47□□□□□ -2.33
COL4A5P29400 AC090960.1-201ENST00000421072 306 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 AC010531.2-201ENST00000465012 153 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 AC079382.1-201ENST00000493346 557 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 HMGN1P12-201ENST00000499125 195 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.47□□□□□ -2.33
COL4A5P29400 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.47□□□□□ -2.33
COL4A5P29400 RNU2-34P-201ENST00000516534 121 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 AC007834.2-201ENST00000536310 343 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 AL451064.1-201ENST00000607718 471 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 AL353149.1-201ENST00000610667 244 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 AC136475.10-201ENST00000620253 385 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 AC011155.2-201ENST00000623202 216 ntBASIC0.47□□□□□ -2.33
COL4A5P29400 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
COL4A5P29400 MIR340-201ENST00000362125 95 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 RNU6-501P-201ENST00000364072 100 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 RNU6-434P-201ENST00000384376 107 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 RNU6-83P-201ENST00000384568 112 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 MIR1253-201ENST00000408273 105 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 Y_RNA.608-201ENST00000410647 95 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 AL031779.1-201ENST00000415663 330 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.46□□□□□ -2.34
COL4A5P29400 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.46□□□□□ -2.34
COL4A5P29400 AC104692.1-201ENST00000472406 90 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.46□□□□□ -2.34
COL4A5P29400 PSMC1P5-201ENST00000512850 177 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 RNU6-758P-201ENST00000516292 89 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 RNU6-1178P-201ENST00000516674 107 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.46□□□□□ -2.34
COL4A5P29400 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.46□□□□□ -2.34
COL4A5P29400 AP003181.2-201ENST00000528941 181 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.46□□□□□ -2.34
COL4A5P29400 AC015688.6-201ENST00000577737 104 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 MIR4753-201ENST00000585119 83 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 AL162424.1-201ENST00000602325 221 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 AL139418.1-201ENST00000613613 177 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 AC040896.1-201ENST00000613819 479 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.46□□□□□ -2.34
COL4A5P29400 AC006001.4-201ENST00000622243 395 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 AC097372.5-201ENST00000623665 376 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 RNU6-39P-201ENST00000384344 107 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 RNU6-417P-201ENST00000384712 107 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 RNU6-910P-201ENST00000390844 107 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 MIR1283-1-201ENST00000408494 87 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 AL606490.4-201ENST00000423117 127 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 USP9YP14-201ENST00000430663 563 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.46□□□□□ -2.34
COL4A5P29400 PRPS1P1-201ENST00000445305 876 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.46□□□□□ -2.34
COL4A5P29400 AC007547.1-201ENST00000462177 490 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.46□□□□□ -2.34
COL4A5P29400 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
COL4A5P29400 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.46□□□□□ -2.34
COL4A5P29400 AC090142.3-201ENST00000519012 385 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 AC024995.1-201ENST00000523014 93 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 AC078795.3-201ENST00000602913 472 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.46□□□□□ -2.34
COL4A5P29400 GHRLOS.1-201ENST00000610995 70 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 TCL6_2.1-201ENST00000615162 119 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 AC019226.2-201ENST00000625973 424 ntBASIC0.46□□□□□ -2.34
COL4A5P29400 SNORA20.2-201ENST00000383922 131 ntBASIC0.45□□□□□ -2.34
COL4A5P29400 RNU6-45P-201ENST00000384471 107 ntBASIC0.45□□□□□ -2.34
COL4A5P29400 RNA5SP323-201ENST00000391094 133 ntBASIC0.45□□□□□ -2.34
COL4A5P29400 AL356776.1-201ENST00000406574 447 ntBASIC0.45□□□□□ -2.34
COL4A5P29400 RNU6-733P-201ENST00000410759 104 ntBASIC0.45□□□□□ -2.34
COL4A5P29400 RNU2-64P-201ENST00000411315 191 ntBASIC0.45□□□□□ -2.34
COL4A5P29400 AC012306.1-201ENST00000423267 114 ntBASIC0.45□□□□□ -2.34
COL4A5P29400 RPL39P38-201ENST00000467018 153 ntBASIC0.45□□□□□ -2.34
COL4A5P29400 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
COL4A5P29400 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.45□□□□□ -2.34
COL4A5P29400 ZNF519P3-201ENST00000557158 1032 ntBASIC0.45□□□□□ -2.34
COL4A5P29400 RSL24D1P11-201ENST00000591045 491 ntBASIC0.45□□□□□ -2.34
COL4A5P29400 SNRPGP20-201ENST00000604477 205 ntBASIC0.45□□□□□ -2.34
COL4A5P29400 AC009994.1-201ENST00000606889 253 ntBASIC0.45□□□□□ -2.34
COL4A5P29400 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
COL4A5P29400 MIR409-201ENST00000362237 79 ntBASIC0.44□□□□□ -2.34
COL4A5P29400 RNU6-533P-201ENST00000384144 107 ntBASIC0.44□□□□□ -2.34
COL4A5P29400 MIR548B-201ENST00000385247 97 ntBASIC0.44□□□□□ -2.34
COL4A5P29400 RNU6-1242P-201ENST00000391052 103 ntBASIC0.44□□□□□ -2.34
COL4A5P29400 RNA5SP467-201ENST00000391274 118 ntBASIC0.44□□□□□ -2.34
COL4A5P29400 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.44□□□□□ -2.34
COL4A5P29400 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.44□□□□□ -2.34
COL4A5P29400 MTCYBP1-201ENST00000454315 1119 ntBASIC0.44□□□□□ -2.34
COL4A5P29400 AL162395.1-201ENST00000457882 422 ntBASIC0.44□□□□□ -2.34
COL4A5P29400 RNU7-94P-201ENST00000459576 63 ntBASIC0.44□□□□□ -2.34
COL4A5P29400 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.44□□□□□ -2.34
COL4A5P29400 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.44□□□□□ -2.34
COL4A5P29400 AC105758.1-201ENST00000506038 399 ntBASIC0.44□□□□□ -2.34
COL4A5P29400 RNU6-947P-201ENST00000516264 106 ntBASIC0.44□□□□□ -2.34
COL4A5P29400 Y_RNA.672-201ENST00000516289 104 ntBASIC0.44□□□□□ -2.34
COL4A5P29400 MTND4P33-201ENST00000556706 766 ntBASIC0.44□□□□□ -2.34
COL4A5P29400 MTCO2P2-201ENST00000591258 225 ntBASIC0.44□□□□□ -2.34
COL4A5P29400 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 455.8 ms