Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ABCF2P2-201ENST00000450549 296 ntBASIC4.22□□□□□ -1.73
VARSP26640 RPL35AP15-201ENST00000468042 339 ntBASIC4.22□□□□□ -1.73
VARSP26640 RNU5F-4P-201ENST00000516581 114 ntBASIC4.22□□□□□ -1.73
VARSP26640 RNU6-1098P-201ENST00000516772 96 ntBASIC4.22□□□□□ -1.73
VARSP26640 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.22□□□□□ -1.73
VARSP26640 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.22□□□□□ -1.73
VARSP26640 RPL23AP91-201ENST00000569211 455 ntBASIC4.22□□□□□ -1.73
VARSP26640 RPL17P51-201ENST00000605218 238 ntBASIC4.22□□□□□ -1.73
VARSP26640 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.22□□□□□ -1.73
VARSP26640 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VARSP26640 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VARSP26640 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
VARSP26640 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.21□□□□□ -1.74
VARSP26640 MIR331-201ENST00000362302 94 ntBASIC4.21□□□□□ -1.74
VARSP26640 RNA5SP322-201ENST00000363617 119 ntBASIC4.21□□□□□ -1.74
VARSP26640 Y_RNA.549-201ENST00000384657 102 ntBASIC4.21□□□□□ -1.74
VARSP26640 MIR624-201ENST00000385217 97 ntBASIC4.21□□□□□ -1.74
VARSP26640 AP000567.1-201ENST00000406413 156 ntBASIC4.21□□□□□ -1.74
VARSP26640 RNA5SP306-201ENST00000411087 107 ntBASIC4.21□□□□□ -1.74
VARSP26640 EDDM3CP-201ENST00000415977 425 ntBASIC4.21□□□□□ -1.74
VARSP26640 RNA5SP310-201ENST00000459084 116 ntBASIC4.21□□□□□ -1.74
VARSP26640 PPIAP15-201ENST00000479662 484 ntBASIC4.21□□□□□ -1.74
VARSP26640 RN7SL812P-201ENST00000493791 279 ntBASIC4.21□□□□□ -1.74
VARSP26640 PARP4P3-201ENST00000510265 317 ntBASIC4.21□□□□□ -1.74
VARSP26640 SNORA31.9-201ENST00000516429 84 ntBASIC4.21□□□□□ -1.74
VARSP26640 MRPL49P2-201ENST00000521066 465 ntBASIC4.21□□□□□ -1.74
VARSP26640 TRAV8-5-201ENST00000537369 341 ntBASIC4.21□□□□□ -1.74
VARSP26640 MIR3609-201ENST00000582661 80 ntBASIC4.21□□□□□ -1.74
VARSP26640 MIR3138-201ENST00000585238 82 ntBASIC4.21□□□□□ -1.74
VARSP26640 AC079587.1-201ENST00000603846 277 ntBASIC4.21□□□□□ -1.74
VARSP26640 HSPE1P7-201ENST00000604681 321 ntBASIC4.21□□□□□ -1.74
VARSP26640 RNU1-30P-201ENST00000606575 163 ntBASIC4.21□□□□□ -1.74
VARSP26640 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.21□□□□□ -1.74
VARSP26640 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
VARSP26640 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VARSP26640 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.2□□□□□ -1.74
VARSP26640 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.2□□□□□ -1.74
VARSP26640 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
VARSP26640 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VARSP26640 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.2□□□□□ -1.74
VARSP26640 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VARSP26640 RNA5SP295-201ENST00000362655 121 ntBASIC4.2□□□□□ -1.74
VARSP26640 SNORD6-201ENST00000365444 73 ntBASIC4.2□□□□□ -1.74
VARSP26640 RNU1-57P-201ENST00000384491 166 ntBASIC4.2□□□□□ -1.74
VARSP26640 SNORA26-201ENST00000391286 122 ntBASIC4.2□□□□□ -1.74
VARSP26640 AL138878.1-201ENST00000405131 347 ntBASIC4.2□□□□□ -1.74
VARSP26640 AF228730.3-201ENST00000436691 102 ntBASIC4.2□□□□□ -1.74
VARSP26640 AC112771.1-201ENST00000463581 102 ntBASIC4.2□□□□□ -1.74
VARSP26640 SNORA40.13-201ENST00000516379 120 ntBASIC4.2□□□□□ -1.74
VARSP26640 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.2□□□□□ -1.74
VARSP26640 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VARSP26640 MIR4644-201ENST00000579929 84 ntBASIC4.2□□□□□ -1.74
VARSP26640 AC114781.5-201ENST00000615297 108 ntBASIC4.2□□□□□ -1.74
VARSP26640 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.2□□□□□ -1.74
VARSP26640 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.2□□□□□ -1.74
VARSP26640 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VARSP26640 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VARSP26640 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VARSP26640 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VARSP26640 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VARSP26640 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VARSP26640 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.19□□□□□ -1.74
VARSP26640 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VARSP26640 SNORD66.1-201ENST00000391230 76 ntBASIC4.19□□□□□ -1.74
VARSP26640 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.19□□□□□ -1.74
VARSP26640 AC015720.1-201ENST00000565251 277 ntBASIC4.19□□□□□ -1.74
VARSP26640 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.19□□□□□ -1.74
VARSP26640 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VARSP26640 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VARSP26640 OTUD4P1-201ENST00000237841 3067 ntBASIC4.19□□□□□ -1.74
VARSP26640 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VARSP26640 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VARSP26640 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VARSP26640 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VARSP26640 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.18□□□□□ -1.74
VARSP26640 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
VARSP26640 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VARSP26640 Y_RNA.203-201ENST00000364106 102 ntBASIC4.18□□□□□ -1.74
VARSP26640 RNA5SP173-201ENST00000364857 136 ntBASIC4.18□□□□□ -1.74
VARSP26640 RNA5SP366-201ENST00000365454 123 ntBASIC4.18□□□□□ -1.74
VARSP26640 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VARSP26640 AL590004.2-201ENST00000404787 371 ntBASIC4.18□□□□□ -1.74
VARSP26640 AC002075.2-201ENST00000425207 252 ntBASIC4.18□□□□□ -1.74
VARSP26640 NDUFB1P1-201ENST00000435191 180 ntBASIC4.18□□□□□ -1.74
VARSP26640 RPL23AP52-201ENST00000439311 478 ntBASIC4.18□□□□□ -1.74
VARSP26640 PHBP16-201ENST00000446318 950 ntBASIC4.18□□□□□ -1.74
VARSP26640 RN7SL98P-201ENST00000462271 300 ntBASIC4.18□□□□□ -1.74
VARSP26640 AC010531.2-201ENST00000465012 153 ntBASIC4.18□□□□□ -1.74
VARSP26640 AC026402.1-201ENST00000513642 170 ntBASIC4.18□□□□□ -1.74
VARSP26640 AP003730.1-201ENST00000524605 285 ntBASIC4.18□□□□□ -1.74
VARSP26640 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.18□□□□□ -1.74
VARSP26640 AC022655.2-201ENST00000577280 318 ntBASIC4.18□□□□□ -1.74
VARSP26640 MIR2681-201ENST00000581814 105 ntBASIC4.18□□□□□ -1.74
VARSP26640 AC110741.2-201ENST00000605278 268 ntBASIC4.18□□□□□ -1.74
VARSP26640 Pinc.1-201ENST00000616452 154 ntBASIC4.18□□□□□ -1.74
VARSP26640 MIR492-201ENST00000638676 116 ntBASIC4.18□□□□□ -1.74
VARSP26640 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.18□□□□□ -1.74
VARSP26640 AC010889.1-201ENST00000566193 2666 ntBASIC4.18□□□□□ -1.74
VARSP26640 ZNF962P-201ENST00000443465 3140 ntBASIC4.17□□□□□ -1.74
VARSP26640 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms