Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU6-743P-201ENST00000364151 106 ntBASIC2.93□□□□□ -1.94
CD40P25942 RNA5SP240-201ENST00000365355 128 ntBASIC2.93□□□□□ -1.94
CD40P25942 RNU6-338P-201ENST00000383888 105 ntBASIC2.93□□□□□ -1.94
CD40P25942 Y_RNA.515-201ENST00000384535 112 ntBASIC2.93□□□□□ -1.94
CD40P25942 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CD40P25942 MIR1283-1-201ENST00000408494 87 ntBASIC2.93□□□□□ -1.94
CD40P25942 RNU2-63P-201ENST00000410792 194 ntBASIC2.93□□□□□ -1.94
CD40P25942 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.93□□□□□ -1.94
CD40P25942 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.93□□□□□ -1.94
CD40P25942 AC002075.2-201ENST00000425207 252 ntBASIC2.93□□□□□ -1.94
CD40P25942 TRIAP1P1-201ENST00000427062 225 ntBASIC2.93□□□□□ -1.94
CD40P25942 MTCO1P5-201ENST00000433573 344 ntBASIC2.93□□□□□ -1.94
CD40P25942 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.93□□□□□ -1.94
CD40P25942 RPS29P2-201ENST00000479278 136 ntBASIC2.93□□□□□ -1.94
CD40P25942 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.93□□□□□ -1.94
CD40P25942 AC091826.1-201ENST00000514065 313 ntBASIC2.93□□□□□ -1.94
CD40P25942 RNU2-12P-201ENST00000517216 168 ntBASIC2.93□□□□□ -1.94
CD40P25942 MIR3145-201ENST00000580727 82 ntBASIC2.93□□□□□ -1.94
CD40P25942 AC090616.3-201ENST00000582184 217 ntBASIC2.93□□□□□ -1.94
CD40P25942 MIR4753-201ENST00000585119 83 ntBASIC2.93□□□□□ -1.94
CD40P25942 AL356280.1-201ENST00000603614 379 ntBASIC2.93□□□□□ -1.94
CD40P25942 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.93□□□□□ -1.94
CD40P25942 AL355297.2-201ENST00000604792 129 ntBASIC2.93□□□□□ -1.94
CD40P25942 AC099778.2-201ENST00000610904 211 ntBASIC2.93□□□□□ -1.94
CD40P25942 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CD40P25942 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CD40P25942 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CD40P25942 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
CD40P25942 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.93□□□□□ -1.94
CD40P25942 AC093908.1-201ENST00000623125 8092 ntBASIC2.92□□□□□ -1.94
CD40P25942 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CD40P25942 RNU6-324P-201ENST00000363957 106 ntBASIC2.92□□□□□ -1.94
CD40P25942 SNORA9-201ENST00000384215 133 ntBASIC2.92□□□□□ -1.94
CD40P25942 MIR491-201ENST00000384877 84 ntBASIC2.92□□□□□ -1.94
CD40P25942 MIR95-201ENST00000385072 81 ntBASIC2.92□□□□□ -1.94
CD40P25942 MIR300-201ENST00000401138 83 ntBASIC2.92□□□□□ -1.94
CD40P25942 AC009969.1-201ENST00000438726 172 ntBASIC2.92□□□□□ -1.94
CD40P25942 NDUFB4P10-201ENST00000452541 359 ntBASIC2.92□□□□□ -1.94
CD40P25942 RPL23AP67-201ENST00000465341 474 ntBASIC2.92□□□□□ -1.94
CD40P25942 AC091959.1-201ENST00000495857 238 ntBASIC2.92□□□□□ -1.94
CD40P25942 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.92□□□□□ -1.94
CD40P25942 PHBP14-201ENST00000512887 367 ntBASIC2.92□□□□□ -1.94
CD40P25942 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.92□□□□□ -1.94
CD40P25942 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.92□□□□□ -1.94
CD40P25942 AC022616.8-201ENST00000533569 253 ntBASIC2.92□□□□□ -1.94
CD40P25942 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.92□□□□□ -1.94
CD40P25942 RPL21P9-201ENST00000556149 474 ntBASIC2.92□□□□□ -1.94
CD40P25942 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.92□□□□□ -1.94
CD40P25942 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.92□□□□□ -1.94
CD40P25942 BX284668.6-201ENST00000606899 438 ntBASIC2.92□□□□□ -1.94
CD40P25942 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.92□□□□□ -1.94
CD40P25942 AC138915.1-201ENST00000565427 1685 ntBASIC2.92□□□□□ -1.94
CD40P25942 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.91□□□□□ -1.94
CD40P25942 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
CD40P25942 Y_RNA.136-201ENST00000363444 102 ntBASIC2.91□□□□□ -1.94
CD40P25942 SNORA38.1-201ENST00000364172 131 ntBASIC2.91□□□□□ -1.94
CD40P25942 AL357075.1-201ENST00000404107 726 ntBASIC2.91□□□□□ -1.94
CD40P25942 Z98941.1-201ENST00000407764 100 ntBASIC2.91□□□□□ -1.94
CD40P25942 RN7SKP220-201ENST00000410611 288 ntBASIC2.91□□□□□ -1.94
CD40P25942 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.91□□□□□ -1.94
CD40P25942 Z75741.1-201ENST00000446793 314 ntBASIC2.91□□□□□ -1.94
CD40P25942 SRIP1-201ENST00000489235 288 ntBASIC2.91□□□□□ -1.94
CD40P25942 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.91□□□□□ -1.94
CD40P25942 SNORA48.11-201ENST00000517015 89 ntBASIC2.91□□□□□ -1.94
CD40P25942 MIR4643-201ENST00000577473 78 ntBASIC2.91□□□□□ -1.94
CD40P25942 MIR3616-201ENST00000584070 92 ntBASIC2.91□□□□□ -1.94
CD40P25942 DEFB117-201ENST00000602356 141 ntBASIC2.91□□□□□ -1.94
CD40P25942 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.91□□□□□ -1.94
CD40P25942 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.91□□□□□ -1.94
CD40P25942 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.91□□□□□ -1.94
CD40P25942 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.91□□□□□ -1.94
CD40P25942 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CD40P25942 AL513302.2-201ENST00000562313 1842 ntBASIC2.91□□□□□ -1.94
CD40P25942 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CD40P25942 AC092435.3-201ENST00000565538 3654 ntBASIC2.9□□□□□ -1.94
CD40P25942 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CD40P25942 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CD40P25942 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.9□□□□□ -1.94
CD40P25942 RNU4-80P-201ENST00000363200 141 ntBASIC2.9□□□□□ -1.95
CD40P25942 RNA5SP125-201ENST00000364843 120 ntBASIC2.9□□□□□ -1.95
CD40P25942 SNORD31B-201ENST00000364977 69 ntBASIC2.9□□□□□ -1.95
CD40P25942 AL139095.1-201ENST00000404326 391 ntBASIC2.9□□□□□ -1.95
CD40P25942 U3.40-201ENST00000408706 208 ntBASIC2.9□□□□□ -1.95
CD40P25942 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
CD40P25942 EEF1B2P7-201ENST00000451177 676 ntBASIC2.9□□□□□ -1.95
CD40P25942 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.9□□□□□ -1.95
CD40P25942 AC006539.3-201ENST00000454258 129 ntBASIC2.9□□□□□ -1.95
CD40P25942 MIR4738-201ENST00000579134 87 ntBASIC2.9□□□□□ -1.95
CD40P25942 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.9□□□□□ -1.95
CD40P25942 MIR7112-201ENST00000616126 65 ntBASIC2.9□□□□□ -1.95
CD40P25942 U7.8-201ENST00000619968 63 ntBASIC2.9□□□□□ -1.95
CD40P25942 MIR3651-201ENST00000630427 90 ntBASIC2.9□□□□□ -1.95
CD40P25942 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CD40P25942 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CD40P25942 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CD40P25942 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
CD40P25942 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD40P25942 Y_RNA.269-201ENST00000364685 89 ntBASIC2.89□□□□□ -1.95
CD40P25942 RNU6-740P-201ENST00000364734 105 ntBASIC2.89□□□□□ -1.95
CD40P25942 Y_RNA.329-201ENST00000365209 107 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms