Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 Y_RNA.453-201ENST00000384223 109 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 RNU6-780P-201ENST00000391030 104 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 RAP1BP3-201ENST00000407180 549 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 OR9R1P-201ENST00000412200 877 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 ARL5AP1-201ENST00000418991 388 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.01□□□□□ -2.25
COL5A3P25940 RPL30P1-201ENST00000488676 339 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 RNU2-69P-201ENST00000516061 100 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 Y_RNA.693-201ENST00000516641 110 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.01□□□□□ -2.25
COL5A3P25940 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.01□□□□□ -2.25
COL5A3P25940 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.01□□□□□ -2.25
COL5A3P25940 CENPUP1-201ENST00000526649 1202 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC090115.3-201ENST00000553218 849 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AL160236.1-201ENST00000556317 195 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC136619.2-201ENST00000563361 631 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 MIR4299-201ENST00000577899 72 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 MIR4424-201ENST00000585257 86 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.01□□□□□ -2.25
COL5A3P25940 AP000907.4-201ENST00000604143 237 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC002044.1-201ENST00000606707 158 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
COL5A3P25940 uc_338.34-201ENST00000617467 174 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC138627.2-201ENST00000624202 601 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 SCARNA4-202ENST00000625402 129 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 Y_RNA.9-201ENST00000362354 101 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 RNU6-1285P-201ENST00000363480 105 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 RNU6-1210P-201ENST00000363775 107 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 RNU6-105P-201ENST00000363909 104 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 RNU6-843P-201ENST00000384454 104 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
COL5A3P25940 RNA5SP212-201ENST00000391223 107 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.01□□□□□ -2.25
COL5A3P25940 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.01□□□□□ -2.25
COL5A3P25940 AC244636.1-201ENST00000421152 228 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.01□□□□□ -2.25
COL5A3P25940 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.01□□□□□ -2.25
COL5A3P25940 SEPT14P3-201ENST00000439401 183 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC007969.2-201ENST00000441891 191 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AL732372.2-207ENST00000445840 183 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 SEPT14P2-201ENST00000453405 183 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 RNU6-1037P-201ENST00000459571 107 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC083904.1-201ENST00000487828 231 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.01□□□□□ -2.25
COL5A3P25940 SEPT14P4-201ENST00000513445 186 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 RNA5SP137-201ENST00000516833 135 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC069113.1-201ENST00000517763 267 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.01□□□□□ -2.25
COL5A3P25940 FO082796.1-201ENST00000523795 183 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC103996.1-201ENST00000555468 102 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC010525.2-201ENST00000590920 195 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC022418.1-201ENST00000624118 445 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 AC098679.4-201ENST00000624241 654 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 MIR3529-201ENST00000637713 78 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 Y_RNA.60-201ENST00000362831 98 ntBASIC1□□□□□ -2.25
COL5A3P25940 RNU6-254P-201ENST00000363377 107 ntBASIC1□□□□□ -2.25
COL5A3P25940 RNY4P14-201ENST00000363656 96 ntBASIC1□□□□□ -2.25
COL5A3P25940 RNU6-1090P-201ENST00000364065 94 ntBASIC1□□□□□ -2.25
COL5A3P25940 RNU6-190P-201ENST00000384154 102 ntBASIC1□□□□□ -2.25
COL5A3P25940 RNU6-43P-201ENST00000384302 107 ntBASIC1□□□□□ -2.25
COL5A3P25940 BTF3L4P2-201ENST00000392798 346 ntBASIC1□□□□□ -2.25
COL5A3P25940 RPS29P13-201ENST00000402041 169 ntBASIC1□□□□□ -2.25
COL5A3P25940 RNU6-648P-201ENST00000410190 107 ntBASIC1□□□□□ -2.25
COL5A3P25940 FCF1P9-201ENST00000412546 282 ntBASIC1□□□□□ -2.25
COL5A3P25940 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1□□□□□ -2.25
COL5A3P25940 AC096920.1-201ENST00000423991 241 ntBASIC1□□□□□ -2.25
COL5A3P25940 AC008267.5-201ENST00000424928 265 ntBASIC1□□□□□ -2.25
COL5A3P25940 AL358176.2-201ENST00000425769 204 ntBASIC1□□□□□ -2.25
COL5A3P25940 JTBP1-201ENST00000441314 247 ntBASIC1□□□□□ -2.25
COL5A3P25940 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1□□□□□ -2.25
COL5A3P25940 RNU7-180P-201ENST00000459240 63 ntBASIC1□□□□□ -2.25
COL5A3P25940 RNU7-138P-201ENST00000459479 64 ntBASIC1□□□□□ -2.25
COL5A3P25940 RPL9P9-202ENST00000466501 579 ntBASIC1□□□□□ -2.25
COL5A3P25940 Y_RNA.654-201ENST00000497848 106 ntBASIC1□□□□□ -2.25
COL5A3P25940 RNU6-189P-201ENST00000516120 101 ntBASIC1□□□□□ -2.25
COL5A3P25940 RNU6-1332P-201ENST00000516666 104 ntBASIC1□□□□□ -2.25
COL5A3P25940 Y_RNA.704-201ENST00000516851 102 ntBASIC1□□□□□ -2.25
COL5A3P25940 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1□□□□□ -2.25
COL5A3P25940 AC107953.1-201ENST00000522216 297 ntBASIC1□□□□□ -2.25
COL5A3P25940 COPS8P3-201ENST00000526024 482 ntBASIC1□□□□□ -2.25
COL5A3P25940 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1□□□□□ -2.25
COL5A3P25940 AL157687.1-201ENST00000554853 619 ntBASIC1□□□□□ -2.25
COL5A3P25940 ZNF519P2-201ENST00000557032 169 ntBASIC1□□□□□ -2.25
COL5A3P25940 AC109446.1-201ENST00000566172 220 ntBASIC1□□□□□ -2.25
COL5A3P25940 EIF1P4-201ENST00000572664 335 ntBASIC1□□□□□ -2.25
COL5A3P25940 MIR3672-201ENST00000584290 82 ntBASIC1□□□□□ -2.25
COL5A3P25940 RPL30P11-203ENST00000598995 310 ntBASIC1□□□□□ -2.25
COL5A3P25940 SNRPGP17-201ENST00000603780 214 ntBASIC1□□□□□ -2.25
COL5A3P25940 AC021646.1-201ENST00000605469 484 ntBASIC1□□□□□ -2.25
COL5A3P25940 RNU6-85P-201ENST00000605989 107 ntBASIC1□□□□□ -2.25
COL5A3P25940 AC092807.2-201ENST00000609367 243 ntBASIC1□□□□□ -2.25
COL5A3P25940 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1□□□□□ -2.25
COL5A3P25940 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1□□□□□ -2.25
COL5A3P25940 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
COL5A3P25940 snoU2_19.1-201ENST00000362361 80 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 RNY3P3-201ENST00000363816 102 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 RNU6-1317P-201ENST00000364582 104 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 Y_RNA.372-201ENST00000365599 102 ntBASIC0.99□□□□□ -2.25
COL5A3P25940 RNU6-692P-201ENST00000384496 107 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms