Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AP001324.2-201ENST00000461163 319 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 AC026436.1-201ENST00000510537 270 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 RNU6-1183P-201ENST00000517054 60 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 RNA5SP165-201ENST00000517142 115 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 AC068657.1-201ENST00000520807 306 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 AL391261.3-201ENST00000557194 520 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 U2.14-201ENST00000615943 113 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 AL138880.2-201ENST00000616214 239 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
POLR2AP24928 RNU5B-2P-201ENST00000363036 113 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 RNU6-1280P-201ENST00000365211 107 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 RNU6-1081P-201ENST00000384537 107 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 MIR544A-201ENST00000384855 91 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 SNORA26.3-201ENST00000391119 136 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 Y_RNA.626-201ENST00000411288 95 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 NDUFS5P4-201ENST00000412983 318 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 AL390729.2-201ENST00000416137 156 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.94□□□□□ -1.94
POLR2AP24928 AC244670.1-201ENST00000436879 112 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 POLR2KP2-201ENST00000438155 177 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 AC005042.3-201ENST00000453230 174 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.94□□□□□ -1.94
POLR2AP24928 SNORA31.1-201ENST00000515993 133 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 SNORA31.5-201ENST00000516190 133 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 RNU6-581P-201ENST00000516214 105 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 SNORA81.3-201ENST00000517283 198 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.94□□□□□ -1.94
POLR2AP24928 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.94□□□□□ -1.94
POLR2AP24928 MIR5571-201ENST00000577998 113 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 AC010620.2-201ENST00000600135 313 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 AL590240.4-201ENST00000616908 390 ntBASIC2.94□□□□□ -1.94
POLR2AP24928 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
POLR2AP24928 AC092268.1-201ENST00000342691 405 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 RNU6-50P-201ENST00000362356 103 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 Y_RNA.136-201ENST00000363444 102 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 RNU1-73P-201ENST00000383971 164 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 AL512633.1-201ENST00000399931 655 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 RPL19P1-201ENST00000411635 428 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 RPS12P2-201ENST00000439728 269 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 AC007969.2-201ENST00000441891 191 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 MRPS10P1-201ENST00000448483 130 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.93□□□□□ -1.94
POLR2AP24928 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.93□□□□□ -1.94
POLR2AP24928 RN7SL75P-201ENST00000461926 281 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 SNORA43.2-201ENST00000516652 128 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 RNU2-44P-201ENST00000516795 194 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.93□□□□□ -1.94
POLR2AP24928 MIR3605-201ENST00000583214 100 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 AL356575.1-201ENST00000603008 283 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 AC011921.3-201ENST00000605540 361 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 RNU6-91P-201ENST00000607774 107 ntBASIC2.93□□□□□ -1.94
POLR2AP24928 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
POLR2AP24928 RNU6-1285P-201ENST00000363480 105 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 Y_RNA.199-201ENST00000364014 102 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
POLR2AP24928 RNU6-886P-201ENST00000384319 105 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 MIR181A2-201ENST00000384863 110 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 USP9YP7-201ENST00000436723 430 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 USP9YP32-201ENST00000452432 430 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 AP004607.1-201ENST00000524456 203 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.92□□□□□ -1.94
POLR2AP24928 AC015712.3-201ENST00000559380 164 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 MIR4282-201ENST00000583613 67 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
POLR2AP24928 RNU6-704P-201ENST00000364162 103 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 RNU4-56P-201ENST00000364700 142 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 HSPE1P26-201ENST00000405341 275 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 RNU2-54P-201ENST00000410299 190 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 RNA5SP247-201ENST00000411181 105 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 MTATP6P29-201ENST00000415057 132 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 AC074198.2-201ENST00000508153 258 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.92□□□□□ -1.94
POLR2AP24928 AC006380.1-201ENST00000603598 186 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 AP001485.1-201ENST00000604799 199 ntBASIC2.92□□□□□ -1.94
POLR2AP24928 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
POLR2AP24928 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
POLR2AP24928 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
POLR2AP24928 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.91□□□□□ -1.94
POLR2AP24928 RNY4P28-201ENST00000365281 93 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 RNU6-937P-201ENST00000384325 106 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 AL159169.1-201ENST00000421119 127 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 HMGB3P8-201ENST00000449709 577 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 AC005840.1-201ENST00000498412 377 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 Y_RNA.683-201ENST00000516508 93 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.91□□□□□ -1.94
POLR2AP24928 AC005520.5-201ENST00000613926 164 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 AC110491.1-201ENST00000562191 2010 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
POLR2AP24928 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.91□□□□□ -1.94
POLR2AP24928 RPL30P12-201ENST00000474666 353 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 AP001025.1-201ENST00000486139 332 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 AC016632.1-201ENST00000503994 196 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 AL008718.3-201ENST00000610217 321 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 AC108706.1-201ENST00000611053 297 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 AC011476.5-201ENST00000615594 130 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 MIR6873-201ENST00000622788 63 ntBASIC2.91□□□□□ -1.94
POLR2AP24928 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
POLR2AP24928 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
POLR2AP24928 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms