Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PISRT1.1-201ENST00000616930 107 ntBASIC2.16□□□□□ -2.06
CHMP24386 U1.36-201ENST00000620684 176 ntBASIC2.16□□□□□ -2.06
CHMP24386 DUXAP9-208ENST00000622815 614 ntBASIC2.16□□□□□ -2.06
CHMP24386 AC099654.5-201ENST00000636479 350 ntBASIC2.16□□□□□ -2.06
CHMP24386 TPTEP1-208ENST00000636884 213 ntBASIC2.16□□□□□ -2.06
CHMP24386 AP000553.5-201ENST00000641933 54 ntBASIC2.16□□□□□ -2.06
CHMP24386 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
CHMP24386 SNORD115-8-201ENST00000363856 82 ntBASIC2.15□□□□□ -2.07
CHMP24386 RNU6-1305P-201ENST00000364353 104 ntBASIC2.15□□□□□ -2.07
CHMP24386 SNORD115-38-201ENST00000365037 82 ntBASIC2.15□□□□□ -2.07
CHMP24386 RNU6-17P-201ENST00000384245 107 ntBASIC2.15□□□□□ -2.07
CHMP24386 RNU6-18P-201ENST00000384527 107 ntBASIC2.15□□□□□ -2.07
CHMP24386 HMGN2P38-201ENST00000423806 265 ntBASIC2.15□□□□□ -2.07
CHMP24386 USMG5P1-201ENST00000425964 177 ntBASIC2.15□□□□□ -2.07
CHMP24386 AC098614.3-201ENST00000438957 440 ntBASIC2.15□□□□□ -2.07
CHMP24386 MTCO1P44-201ENST00000441935 243 ntBASIC2.15□□□□□ -2.07
CHMP24386 MTND3P10-201ENST00000450967 341 ntBASIC2.15□□□□□ -2.07
CHMP24386 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.15□□□□□ -2.07
CHMP24386 RPL7P42-201ENST00000481005 679 ntBASIC2.15□□□□□ -2.07
CHMP24386 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.15□□□□□ -2.07
CHMP24386 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.15□□□□□ -2.07
CHMP24386 AC008413.1-201ENST00000511864 177 ntBASIC2.15□□□□□ -2.07
CHMP24386 SNORA25.14-201ENST00000516481 132 ntBASIC2.15□□□□□ -2.07
CHMP24386 SUMO2P18-201ENST00000518873 252 ntBASIC2.15□□□□□ -2.07
CHMP24386 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.15□□□□□ -2.07
CHMP24386 MIR4299-201ENST00000577899 72 ntBASIC2.15□□□□□ -2.07
CHMP24386 MIR3945-201ENST00000581853 98 ntBASIC2.15□□□□□ -2.07
CHMP24386 AC083806.3-201ENST00000614016 455 ntBASIC2.15□□□□□ -2.07
CHMP24386 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.15□□□□□ -2.07
CHMP24386 AC022306.2-201ENST00000617563 647 ntBASIC2.15□□□□□ -2.07
CHMP24386 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.15□□□□□ -2.07
CHMP24386 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CHMP24386 AL159152.1-201ENST00000635019 2587 ntBASIC2.14□□□□□ -2.07
CHMP24386 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CHMP24386 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
CHMP24386 MIRLET7G-201ENST00000362280 84 ntBASIC2.14□□□□□ -2.07
CHMP24386 SNORD81.2-201ENST00000365153 76 ntBASIC2.14□□□□□ -2.07
CHMP24386 RNU6-1283P-201ENST00000365314 105 ntBASIC2.14□□□□□ -2.07
CHMP24386 XGY1-201ENST00000381172 446 ntBASIC2.14□□□□□ -2.07
CHMP24386 Y_RNA.390-201ENST00000383932 102 ntBASIC2.14□□□□□ -2.07
CHMP24386 Y_RNA.490-201ENST00000384413 102 ntBASIC2.14□□□□□ -2.07
CHMP24386 RPL23AP6-201ENST00000446637 472 ntBASIC2.14□□□□□ -2.07
CHMP24386 AC114982.1-201ENST00000469402 321 ntBASIC2.14□□□□□ -2.07
CHMP24386 SNORA20.3-201ENST00000516880 132 ntBASIC2.14□□□□□ -2.07
CHMP24386 AC134698.4-201ENST00000523451 826 ntBASIC2.14□□□□□ -2.07
CHMP24386 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.14□□□□□ -2.07
CHMP24386 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.14□□□□□ -2.07
CHMP24386 AC091544.4-201ENST00000555268 342 ntBASIC2.14□□□□□ -2.07
CHMP24386 UBL5P4-201ENST00000562584 236 ntBASIC2.14□□□□□ -2.07
CHMP24386 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.14□□□□□ -2.07
CHMP24386 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CHMP24386 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
CHMP24386 RNA5SP289-201ENST00000362332 137 ntBASIC2.13□□□□□ -2.07
CHMP24386 RNU6-873P-201ENST00000363833 107 ntBASIC2.13□□□□□ -2.07
CHMP24386 RNU6-245P-201ENST00000384020 107 ntBASIC2.13□□□□□ -2.07
CHMP24386 SNORA70B-201ENST00000384210 135 ntBASIC2.13□□□□□ -2.07
CHMP24386 SNORA8-201ENST00000384574 139 ntBASIC2.13□□□□□ -2.07
CHMP24386 RNA5SP425-201ENST00000410336 112 ntBASIC2.13□□□□□ -2.07
CHMP24386 AC138393.2-201ENST00000414742 246 ntBASIC2.13□□□□□ -2.07
CHMP24386 AL353997.1-201ENST00000432936 108 ntBASIC2.13□□□□□ -2.07
CHMP24386 AL357134.1-201ENST00000445848 426 ntBASIC2.13□□□□□ -2.07
CHMP24386 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.13□□□□□ -2.07
CHMP24386 RNA5SP233-201ENST00000459153 113 ntBASIC2.13□□□□□ -2.07
CHMP24386 HMGN2P9-201ENST00000476875 229 ntBASIC2.13□□□□□ -2.07
CHMP24386 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.13□□□□□ -2.07
CHMP24386 RNVU1-2-201ENST00000516326 135 ntBASIC2.13□□□□□ -2.07
CHMP24386 Y_RNA.706-201ENST00000516933 99 ntBASIC2.13□□□□□ -2.07
CHMP24386 AC104581.2-201ENST00000572227 430 ntBASIC2.13□□□□□ -2.07
CHMP24386 MIR5007-201ENST00000583098 95 ntBASIC2.13□□□□□ -2.07
CHMP24386 AC005786.1-201ENST00000588553 154 ntBASIC2.13□□□□□ -2.07
CHMP24386 AC005034.5-201ENST00000604219 466 ntBASIC2.13□□□□□ -2.07
CHMP24386 AC100812.1-201ENST00000607622 580 ntBASIC2.13□□□□□ -2.07
CHMP24386 AC046143.2-201ENST00000609789 160 ntBASIC2.13□□□□□ -2.07
CHMP24386 AL773524.1-201ENST00000614065 229 ntBASIC2.13□□□□□ -2.07
CHMP24386 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.13□□□□□ -2.07
CHMP24386 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.13□□□□□ -2.07
CHMP24386 KPNA2P1-201ENST00000458289 1591 ntBASIC2.12□□□□□ -2.07
CHMP24386 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
CHMP24386 SNORA48.1-201ENST00000390879 135 ntBASIC2.12□□□□□ -2.07
CHMP24386 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.12□□□□□ -2.07
CHMP24386 AC244636.1-201ENST00000421152 228 ntBASIC2.12□□□□□ -2.07
CHMP24386 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.12□□□□□ -2.07
CHMP24386 AC074290.1-201ENST00000448883 135 ntBASIC2.12□□□□□ -2.07
CHMP24386 AC016717.1-201ENST00000448918 286 ntBASIC2.12□□□□□ -2.07
CHMP24386 Y_RNA.635-201ENST00000459041 101 ntBASIC2.12□□□□□ -2.07
CHMP24386 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.12□□□□□ -2.07
CHMP24386 AP000870.1-201ENST00000472927 406 ntBASIC2.12□□□□□ -2.07
CHMP24386 TRBV12-1-201ENST00000479785 344 ntBASIC2.12□□□□□ -2.07
CHMP24386 HMGN1P12-201ENST00000499125 195 ntBASIC2.12□□□□□ -2.07
CHMP24386 AC097473.1-201ENST00000508142 408 ntBASIC2.12□□□□□ -2.07
CHMP24386 Y_RNA.691-201ENST00000516611 103 ntBASIC2.12□□□□□ -2.07
CHMP24386 MIR514B-201ENST00000516774 80 ntBASIC2.12□□□□□ -2.07
CHMP24386 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.12□□□□□ -2.07
CHMP24386 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.12□□□□□ -2.07
CHMP24386 AL355802.3-201ENST00000607571 545 ntBASIC2.12□□□□□ -2.07
CHMP24386 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.12□□□□□ -2.07
CHMP24386 SNORD11B-201ENST00000607707 90 ntBASIC2.12□□□□□ -2.07
CHMP24386 AL627230.6-201ENST00000611129 280 ntBASIC2.12□□□□□ -2.07
CHMP24386 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.12□□□□□ -2.07
CHMP24386 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms