Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 AL158050.2-201ENST00000605336 568 ntBASIC0.44□□□□□ -2.34
RPS4Y1P22090 GHRLOS.1-201ENST00000610995 70 ntBASIC0.44□□□□□ -2.34
RPS4Y1P22090 AC104465.1-201ENST00000611365 139 ntBASIC0.44□□□□□ -2.34
RPS4Y1P22090 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
RPS4Y1P22090 AC022418.1-201ENST00000624118 445 ntBASIC0.44□□□□□ -2.34
RPS4Y1P22090 SNORD3E-202ENST00000627253 216 ntBASIC0.44□□□□□ -2.34
RPS4Y1P22090 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
RPS4Y1P22090 RNU6-1287P-201ENST00000362914 107 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 RNU4-12P-201ENST00000365233 139 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 RNU6-1060P-201ENST00000384664 107 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 SNORD41-201ENST00000386967 70 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
RPS4Y1P22090 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.43□□□□□ -2.34
RPS4Y1P22090 AC104850.1-201ENST00000435940 476 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 AL162395.1-201ENST00000457882 422 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 SRRM1P2-201ENST00000464531 1192 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 COX6CP6-201ENST00000490840 228 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 AC079382.1-201ENST00000493346 557 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 RNU6-1146P-201ENST00000516282 102 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.43□□□□□ -2.34
RPS4Y1P22090 AC112191.3-201ENST00000604371 277 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.43□□□□□ -2.34
RPS4Y1P22090 AC022709.1-201ENST00000615967 87 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 AL603839.4-201ENST00000624658 1005 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 AC006927.3-201ENST00000638789 384 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 AC023934.1-201ENST00000574529 2389 ntBASIC0.43□□□□□ -2.34
RPS4Y1P22090 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
RPS4Y1P22090 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.42□□□□□ -2.34
RPS4Y1P22090 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
RPS4Y1P22090 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 Y_RNA.480-201ENST00000384364 102 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 SNORA80D-201ENST00000384488 135 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 Y_RNA.508-201ENST00000384502 114 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 MIR549A-201ENST00000385268 96 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 MIR653-201ENST00000385279 96 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.42□□□□□ -2.34
RPS4Y1P22090 AC016909.1-201ENST00000415916 166 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 MTCO2P23-201ENST00000425216 680 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 CETN4P-201ENST00000432407 469 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.42□□□□□ -2.34
RPS4Y1P22090 AL512286.1-201ENST00000439244 400 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.42□□□□□ -2.34
RPS4Y1P22090 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.42□□□□□ -2.34
RPS4Y1P22090 RNU4-54P-201ENST00000516428 129 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 RNA5SP121-201ENST00000516537 101 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 AC022878.1-201ENST00000530684 149 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.42□□□□□ -2.34
RPS4Y1P22090 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.42□□□□□ -2.34
RPS4Y1P22090 MTND4P33-201ENST00000556706 766 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 MIR4775-201ENST00000581168 75 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.42□□□□□ -2.34
RPS4Y1P22090 Z99497.2-201ENST00000603634 310 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 AC080078.2-201ENST00000603766 501 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 AC027807.2-201ENST00000616099 408 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 AC005562.2-201ENST00000618264 111 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 MIR6513-201ENST00000621188 64 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 AC006001.4-201ENST00000622243 395 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 AC106754.2-201ENST00000623006 233 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.42□□□□□ -2.34
RPS4Y1P22090 MIR5087-201ENST00000635826 76 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 U6.114-201ENST00000636407 96 ntBASIC0.42□□□□□ -2.34
RPS4Y1P22090 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
RPS4Y1P22090 RNU5E-5P-201ENST00000365379 116 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 RNU6-110P-201ENST00000384508 104 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 AL355143.1-201ENST00000407101 841 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 RN7SKP200-201ENST00000410564 320 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 AC004866.1-201ENST00000411748 78 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 AL356583.2-201ENST00000426536 280 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 snoU13.6-201ENST00000458785 104 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 RNU2-69P-201ENST00000516061 100 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 Y_RNA.673-201ENST00000516306 88 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.41□□□□□ -2.34
RPS4Y1P22090 AL353765.1-201ENST00000605514 183 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 AC002044.1-201ENST00000606707 158 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 MIR6515-201ENST00000619843 57 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 MIR8054-201ENST00000620877 86 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 AL513423.1-201ENST00000621695 132 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 AL359697.1-201ENST00000624879 587 ntBASIC0.41□□□□□ -2.34
RPS4Y1P22090 RNU6-500P-201ENST00000362349 107 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 SNORD113-6-201ENST00000363345 75 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 Y_RNA.796-201ENST00000364268 102 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 Y_RNA.799-201ENST00000364992 102 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 Y_RNA.354-201ENST00000365448 111 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 Y_RNA.355-201ENST00000365462 98 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 RNA5SP323-201ENST00000391094 133 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.4□□□□□ -2.35
RPS4Y1P22090 AL596276.1-201ENST00000434465 418 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.4□□□□□ -2.35
RPS4Y1P22090 AC004386.2-201ENST00000441858 148 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 NFU1P2-201ENST00000448700 469 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.4□□□□□ -2.35
RPS4Y1P22090 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.4□□□□□ -2.35
RPS4Y1P22090 USP9YP12-201ENST00000450481 570 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.4□□□□□ -2.35
RPS4Y1P22090 HMGB1P29-201ENST00000505659 499 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.4□□□□□ -2.35
RPS4Y1P22090 SNORD27.1-201ENST00000516319 72 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
RPS4Y1P22090 RNU2-46P-201ENST00000517038 113 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms