Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC009237.7-201ENST00000447357 229 ntBASIC1.59□□□□□ -2.15
HLA-DPA1P20036 NFU1P2-201ENST00000448700 469 ntBASIC1.59□□□□□ -2.15
HLA-DPA1P20036 AC016717.1-201ENST00000448918 286 ntBASIC1.59□□□□□ -2.15
HLA-DPA1P20036 OR2AQ1P-201ENST00000451972 200 ntBASIC1.59□□□□□ -2.15
HLA-DPA1P20036 MTCO3P8-201ENST00000453691 755 ntBASIC1.59□□□□□ -2.15
HLA-DPA1P20036 RPS26P55-201ENST00000471178 356 ntBASIC1.59□□□□□ -2.15
HLA-DPA1P20036 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.59□□□□□ -2.15
HLA-DPA1P20036 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DPA1P20036 CPDP1-201ENST00000579660 283 ntBASIC1.59□□□□□ -2.15
HLA-DPA1P20036 AC100830.2-201ENST00000581636 240 ntBASIC1.59□□□□□ -2.15
HLA-DPA1P20036 SNRPGP20-201ENST00000604477 205 ntBASIC1.59□□□□□ -2.15
HLA-DPA1P20036 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
HLA-DPA1P20036 AL353149.1-201ENST00000610667 244 ntBASIC1.59□□□□□ -2.15
HLA-DPA1P20036 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.59□□□□□ -2.15
HLA-DPA1P20036 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
HLA-DPA1P20036 AC097520.1-201ENST00000624435 385 ntBASIC1.59□□□□□ -2.15
HLA-DPA1P20036 Y_RNA.167-201ENST00000363735 109 ntBASIC1.58□□□□□ -2.16
HLA-DPA1P20036 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.58□□□□□ -2.16
HLA-DPA1P20036 RNU6-975P-201ENST00000384296 105 ntBASIC1.58□□□□□ -2.16
HLA-DPA1P20036 RNU6-1235P-201ENST00000384559 107 ntBASIC1.58□□□□□ -2.16
HLA-DPA1P20036 MIR450B-201ENST00000401182 78 ntBASIC1.58□□□□□ -2.16
HLA-DPA1P20036 RNU2-66P-201ENST00000410650 161 ntBASIC1.58□□□□□ -2.16
HLA-DPA1P20036 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.58□□□□□ -2.16
HLA-DPA1P20036 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.58□□□□□ -2.16
HLA-DPA1P20036 AC245517.4-201ENST00000448601 281 ntBASIC1.58□□□□□ -2.16
HLA-DPA1P20036 RNU6-498P-201ENST00000459468 107 ntBASIC1.58□□□□□ -2.16
HLA-DPA1P20036 RNA5SP445-201ENST00000515889 115 ntBASIC1.58□□□□□ -2.16
HLA-DPA1P20036 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.58□□□□□ -2.16
HLA-DPA1P20036 uc_338.5-201ENST00000611839 155 ntBASIC1.58□□□□□ -2.16
HLA-DPA1P20036 Z99129.1-201ENST00000612510 255 ntBASIC1.58□□□□□ -2.16
HLA-DPA1P20036 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.58□□□□□ -2.16
HLA-DPA1P20036 AC124864.2-201ENST00000624736 186 ntBASIC1.58□□□□□ -2.16
HLA-DPA1P20036 AC095038.3-201ENST00000634439 195 ntBASIC1.58□□□□□ -2.16
HLA-DPA1P20036 MIR338-201ENST00000636369 67 ntBASIC1.58□□□□□ -2.16
HLA-DPA1P20036 Y_RNA.231-201ENST00000364358 102 ntBASIC1.57□□□□□ -2.16
HLA-DPA1P20036 SNORD1A-201ENST00000364968 72 ntBASIC1.57□□□□□ -2.16
HLA-DPA1P20036 AC007215.1-201ENST00000464893 276 ntBASIC1.57□□□□□ -2.16
HLA-DPA1P20036 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.57□□□□□ -2.16
HLA-DPA1P20036 AC083904.1-201ENST00000487828 231 ntBASIC1.57□□□□□ -2.16
HLA-DPA1P20036 AF186996.7-201ENST00000492781 209 ntBASIC1.57□□□□□ -2.16
HLA-DPA1P20036 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DPA1P20036 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
HLA-DPA1P20036 MTND1P35-201ENST00000526739 508 ntBASIC1.57□□□□□ -2.16
HLA-DPA1P20036 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.57□□□□□ -2.16
HLA-DPA1P20036 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HLA-DPA1P20036 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DPA1P20036 AC026371.1-201ENST00000551867 419 ntBASIC1.57□□□□□ -2.16
HLA-DPA1P20036 AC146944.4-201ENST00000602697 718 ntBASIC1.57□□□□□ -2.16
HLA-DPA1P20036 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DPA1P20036 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.57□□□□□ -2.16
HLA-DPA1P20036 MTND4P5-201ENST00000435821 1374 ntBASIC1.57□□□□□ -2.16
HLA-DPA1P20036 AC121333.1-201ENST00000567488 2709 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.56□□□□□ -2.16
HLA-DPA1P20036 Y_RNA.140-201ENST00000363474 103 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 RNU6-1305P-201ENST00000364353 104 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 RNU6-784P-201ENST00000384330 106 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 MIR320B2-201ENST00000408479 138 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 SNRPEP10-201ENST00000420249 274 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DPA1P20036 AC074290.1-201ENST00000448883 135 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 Y_RNA.693-201ENST00000516641 110 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DPA1P20036 AL512360.1-201ENST00000555346 234 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 RNU6-89P-201ENST00000606519 100 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 AC004492.1-201ENST00000607036 742 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 AC245008.1-201ENST00000608123 476 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 FAM157A-202ENST00000615155 405 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 AC137590.2-201ENST00000619709 240 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 AL359880.1-201ENST00000621879 266 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 AP000648.3-201ENST00000623539 4507 ntBASIC1.56□□□□□ -2.16
HLA-DPA1P20036 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HLA-DPA1P20036 MIR302D-201ENST00000362275 68 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 SNORD116-1-201ENST00000384335 95 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
HLA-DPA1P20036 SNORA67.5-201ENST00000391036 107 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 CALM2P3-201ENST00000400429 449 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 RNU6-1068P-201ENST00000410958 103 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 AC004866.1-201ENST00000411748 78 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.55□□□□□ -2.16
HLA-DPA1P20036 USP9YP14-201ENST00000430663 563 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DPA1P20036 AC073910.1-201ENST00000445047 438 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.55□□□□□ -2.16
HLA-DPA1P20036 snoU13.27-201ENST00000459278 104 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 AC107401.1-201ENST00000503426 685 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 AC079140.2-201ENST00000506193 142 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.55□□□□□ -2.16
HLA-DPA1P20036 RNA5SP458-201ENST00000516188 119 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DPA1P20036 SNORD53B-201ENST00000577887 78 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.55□□□□□ -2.16
HLA-DPA1P20036 AL121890.5-201ENST00000620848 304 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 OR4G1P-203ENST00000641984 1631 ntBASIC1.55□□□□□ -2.16
HLA-DPA1P20036 AL161722.3-201ENST00000605789 2983 ntBASIC1.54□□□□□ -2.16
HLA-DPA1P20036 RNU6-522P-201ENST00000364497 107 ntBASIC1.54□□□□□ -2.16
HLA-DPA1P20036 RNU6-331P-201ENST00000384724 107 ntBASIC1.54□□□□□ -2.16
HLA-DPA1P20036 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.54□□□□□ -2.16
HLA-DPA1P20036 ERLEC1P1-201ENST00000433806 578 ntBASIC1.54□□□□□ -2.16
HLA-DPA1P20036 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 289.3 ms