Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ERCC3P19447 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ERCC3P19447 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ERCC3P19447 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
ERCC3P19447 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
ERCC3P19447 MIR422A-201ENST00000362286 90 ntBASIC3.78□□□□□ -1.8
ERCC3P19447 RNU4-90P-201ENST00000362773 141 ntBASIC3.78□□□□□ -1.8
ERCC3P19447 RNU6-1180P-201ENST00000364935 107 ntBASIC3.78□□□□□ -1.8
ERCC3P19447 Y_RNA.331-201ENST00000365267 102 ntBASIC3.78□□□□□ -1.8
ERCC3P19447 RNU6-438P-201ENST00000365561 103 ntBASIC3.78□□□□□ -1.8
ERCC3P19447 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ERCC3P19447 RNU6-1310P-201ENST00000384153 107 ntBASIC3.78□□□□□ -1.8
ERCC3P19447 SNORD63-201ENST00000384262 68 ntBASIC3.78□□□□□ -1.8
ERCC3P19447 Y_RNA.477-201ENST00000384352 108 ntBASIC3.78□□□□□ -1.8
ERCC3P19447 RNU6-102P-201ENST00000384485 104 ntBASIC3.78□□□□□ -1.8
ERCC3P19447 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ERCC3P19447 RNU6-1203P-201ENST00000410703 110 ntBASIC3.78□□□□□ -1.8
ERCC3P19447 ELOCP21-201ENST00000412558 336 ntBASIC3.78□□□□□ -1.8
ERCC3P19447 AC009969.1-201ENST00000438726 172 ntBASIC3.78□□□□□ -1.8
ERCC3P19447 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.78□□□□□ -1.8
ERCC3P19447 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.78□□□□□ -1.8
ERCC3P19447 Y_RNA.668-201ENST00000516233 93 ntBASIC3.78□□□□□ -1.8
ERCC3P19447 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.78□□□□□ -1.8
ERCC3P19447 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.78□□□□□ -1.8
ERCC3P19447 AL391987.6-201ENST00000305671 199 ntBASIC3.77□□□□□ -1.81
ERCC3P19447 Y_RNA.476-201ENST00000384347 108 ntBASIC3.77□□□□□ -1.81
ERCC3P19447 AL390729.2-201ENST00000416137 156 ntBASIC3.77□□□□□ -1.81
ERCC3P19447 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.77□□□□□ -1.81
ERCC3P19447 SNORD127-201ENST00000458892 86 ntBASIC3.77□□□□□ -1.81
ERCC3P19447 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.77□□□□□ -1.81
ERCC3P19447 SNORA70.19-201ENST00000516717 90 ntBASIC3.77□□□□□ -1.81
ERCC3P19447 MIR2276-201ENST00000516886 89 ntBASIC3.77□□□□□ -1.81
ERCC3P19447 AC068657.1-201ENST00000520807 306 ntBASIC3.77□□□□□ -1.81
ERCC3P19447 AK6P2-201ENST00000549020 471 ntBASIC3.77□□□□□ -1.81
ERCC3P19447 MIR4753-201ENST00000585119 83 ntBASIC3.77□□□□□ -1.81
ERCC3P19447 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.77□□□□□ -1.81
ERCC3P19447 AC091932.3-201ENST00000624223 323 ntBASIC3.77□□□□□ -1.81
ERCC3P19447 IGHVIII-44-202ENST00000636235 289 ntBASIC3.77□□□□□ -1.81
ERCC3P19447 MIR3674-201ENST00000636576 68 ntBASIC3.77□□□□□ -1.81
ERCC3P19447 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.77□□□□□ -1.81
ERCC3P19447 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
ERCC3P19447 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
ERCC3P19447 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ERCC3P19447 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
ERCC3P19447 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ERCC3P19447 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.76□□□□□ -1.81
ERCC3P19447 Y_RNA.16-201ENST00000362421 102 ntBASIC3.76□□□□□ -1.81
ERCC3P19447 Y_RNA.230-201ENST00000364348 109 ntBASIC3.76□□□□□ -1.81
ERCC3P19447 MIR627-201ENST00000384979 97 ntBASIC3.76□□□□□ -1.81
ERCC3P19447 RPL23AP36-201ENST00000413895 458 ntBASIC3.76□□□□□ -1.81
ERCC3P19447 COTL1P1-201ENST00000422309 375 ntBASIC3.76□□□□□ -1.81
ERCC3P19447 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.76□□□□□ -1.81
ERCC3P19447 RN7SL863P-201ENST00000462370 296 ntBASIC3.76□□□□□ -1.81
ERCC3P19447 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
ERCC3P19447 AC090616.3-201ENST00000582184 217 ntBASIC3.76□□□□□ -1.81
ERCC3P19447 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.76□□□□□ -1.81
ERCC3P19447 AC090425.1-201ENST00000610007 140 ntBASIC3.76□□□□□ -1.81
ERCC3P19447 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
ERCC3P19447 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ERCC3P19447 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ERCC3P19447 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.75□□□□□ -1.81
ERCC3P19447 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 RNU1-70P-201ENST00000362618 164 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 RNU1-23P-201ENST00000363361 144 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 Y_RNA.237-201ENST00000364439 102 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 Y_RNA.286-201ENST00000364813 102 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 Y_RNA.541-201ENST00000384640 113 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 Y_RNA.570-201ENST00000384750 101 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 Y_RNA.581-201ENST00000391017 97 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 AL445687.1-201ENST00000439946 251 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 RPL23AP3-201ENST00000453844 468 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 RPL39P38-201ENST00000467018 153 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 AC091826.1-201ENST00000514065 313 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.75□□□□□ -1.81
ERCC3P19447 RNU6-496P-201ENST00000516145 99 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 RNU6-155P-201ENST00000516347 100 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.75□□□□□ -1.81
ERCC3P19447 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.75□□□□□ -1.81
ERCC3P19447 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.75□□□□□ -1.81
ERCC3P19447 AC055872.1-201ENST00000570978 278 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 MIR3616-201ENST00000584070 92 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 AL109918.3-201ENST00000603072 338 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 AC006380.1-201ENST00000603598 186 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 AC037487.3-201ENST00000606668 112 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 SDR42E1P4-201ENST00000620894 481 ntBASIC3.75□□□□□ -1.81
ERCC3P19447 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ERCC3P19447 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ERCC3P19447 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.75□□□□□ -1.81
ERCC3P19447 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ERCC3P19447 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.74□□□□□ -1.81
ERCC3P19447 Y_RNA.54-201ENST00000362766 105 ntBASIC3.74□□□□□ -1.81
ERCC3P19447 Y_RNA.350-201ENST00000365409 98 ntBASIC3.74□□□□□ -1.81
ERCC3P19447 AP002088.1-201ENST00000382740 395 ntBASIC3.74□□□□□ -1.81
ERCC3P19447 Y_RNA.510-201ENST00000384511 114 ntBASIC3.74□□□□□ -1.81
ERCC3P19447 SNORA53-201ENST00000391141 249 ntBASIC3.74□□□□□ -1.81
ERCC3P19447 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.74□□□□□ -1.81
ERCC3P19447 RNU6-1338P-201ENST00000516328 91 ntBASIC3.74□□□□□ -1.81
ERCC3P19447 AC109329.2-201ENST00000519658 482 ntBASIC3.74□□□□□ -1.81
ERCC3P19447 AC023157.2-201ENST00000540596 141 ntBASIC3.74□□□□□ -1.81
ERCC3P19447 MIR4506-201ENST00000584693 77 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms