Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 Y_RNA.287-201ENST00000364853 94 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 RNU1-140P-201ENST00000365040 165 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 SNORA5A-201ENST00000384111 134 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 MT-TT-201ENST00000387460 66 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 RNA5SP252-201ENST00000391131 119 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 AC074117.2-201ENST00000417130 397 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 CYCSP49-201ENST00000420810 319 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.09□□□□□ -1.91
TNFRSF1AP19438 HMGN2P30-201ENST00000423237 256 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.09□□□□□ -1.91
TNFRSF1AP19438 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.09□□□□□ -1.91
TNFRSF1AP19438 AL031183.1-201ENST00000457667 207 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.09□□□□□ -1.91
TNFRSF1AP19438 RN7SKP83-201ENST00000516512 178 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 RNU6-762P-201ENST00000517107 102 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.09□□□□□ -1.91
TNFRSF1AP19438 Y_RNA.757-201ENST00000578934 114 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 MIR3674-201ENST00000636576 68 ntBASIC3.09□□□□□ -1.91
TNFRSF1AP19438 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.09□□□□□ -1.92
TNFRSF1AP19438 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
TNFRSF1AP19438 CENPCP1-201ENST00000533085 2578 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 GABRG2-229ENST00000641017 3628 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AC099654.7-201ENST00000635788 2127 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFRSF1AP19438 RNU6-778P-201ENST00000363269 103 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 RNA5SP139-201ENST00000364340 117 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 RNU6-1310P-201ENST00000384153 107 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 SNORA72.4-201ENST00000384174 132 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 MIR548A3-201ENST00000385297 97 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 RNU6-1275P-201ENST00000391087 107 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 HMGN2P8-201ENST00000391458 268 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 EI24P2-201ENST00000397776 1076 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AL512633.1-201ENST00000399931 655 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AL355497.1-201ENST00000406262 551 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 U3.37-201ENST00000408528 213 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 U3.40-201ENST00000408706 208 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 RNU6-1245P-201ENST00000411130 106 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 RNA5SP31-201ENST00000411144 127 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AC096649.2-201ENST00000416186 393 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 TRIAP1P1-201ENST00000427062 225 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AC006989.1-201ENST00000427212 131 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.08□□□□□ -1.92
TNFRSF1AP19438 GPM6BP3-201ENST00000442797 145 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AP000705.1-201ENST00000454567 350 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.08□□□□□ -1.92
TNFRSF1AP19438 SNORA84-201ENST00000459229 133 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AC091153.1-201ENST00000466297 402 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AC091179.3-201ENST00000474761 144 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 RPL21P129-201ENST00000491732 478 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 RNU1-103P-201ENST00000516502 125 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 RNA5SP143-201ENST00000516936 115 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 RNU6-703P-201ENST00000516946 107 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 RNU2-12P-201ENST00000517216 168 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AP003327.1-201ENST00000529684 127 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AC008011.1-201ENST00000545989 227 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AC008739.3-201ENST00000603262 127 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AC006133.1-201ENST00000617106 264 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFRSF1AP19438 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFRSF1AP19438 AC092435.3-201ENST00000565538 3654 ntBASIC3.08□□□□□ -1.92
TNFRSF1AP19438 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFRSF1AP19438 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNFRSF1AP19438 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNFRSF1AP19438 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TNFRSF1AP19438 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFRSF1AP19438 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFRSF1AP19438 RNU5F-3P-201ENST00000363767 117 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 RNU6-1082P-201ENST00000364574 107 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 RNA5SP51-201ENST00000364750 119 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 RNU6-294P-201ENST00000364999 102 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 RNU1-73P-201ENST00000383971 164 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 MIR526A2-201ENST00000390198 65 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 AL606845.1-201ENST00000404881 255 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 AL158147.1-201ENST00000443970 75 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 SNRPGP7-201ENST00000469016 106 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 RNU6-1061P-201ENST00000516530 99 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 RNA5SP54-201ENST00000516951 92 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 AC026403.1-201ENST00000518938 295 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 AP004607.1-201ENST00000524456 203 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 AC133485.4-201ENST00000561835 220 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 AC138907.4-201ENST00000570107 226 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFRSF1AP19438 MIR3158-1-201ENST00000583596 81 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFRSF1AP19438 AC006380.1-201ENST00000603598 186 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 AC099778.2-201ENST00000610904 211 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 AC024581.2-201ENST00000619986 252 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 AC012640.5-201ENST00000623897 319 ntBASIC3.07□□□□□ -1.92
TNFRSF1AP19438 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFRSF1AP19438 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFRSF1AP19438 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFRSF1AP19438 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
TNFRSF1AP19438 AC010680.1-201ENST00000590024 3590 ntBASIC3.06□□□□□ -1.92
TNFRSF1AP19438 AC006504.1-201ENST00000562493 3666 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 281 ms