Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MTCO1P44-201ENST00000441935 243 ntBASIC1.91□□□□□ -2.1
PDGFRAP16234 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.91□□□□□ -2.1
PDGFRAP16234 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.91□□□□□ -2.1
PDGFRAP16234 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.91□□□□□ -2.1
PDGFRAP16234 AC124303.1-201ENST00000605703 360 ntBASIC1.91□□□□□ -2.1
PDGFRAP16234 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.91□□□□□ -2.1
PDGFRAP16234 AC002553.4-201ENST00000616896 331 ntBASIC1.91□□□□□ -2.1
PDGFRAP16234 AC006504.8-201ENST00000621046 635 ntBASIC1.91□□□□□ -2.1
PDGFRAP16234 SCARNA4-201ENST00000629045 128 ntBASIC1.91□□□□□ -2.1
PDGFRAP16234 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PDGFRAP16234 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
PDGFRAP16234 RNU6-1013P-201ENST00000384180 107 ntBASIC1.9□□□□□ -2.11
PDGFRAP16234 AC009310.1-201ENST00000414414 451 ntBASIC1.9□□□□□ -2.11
PDGFRAP16234 EIF1P1-201ENST00000421436 341 ntBASIC1.9□□□□□ -2.11
PDGFRAP16234 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.9□□□□□ -2.11
PDGFRAP16234 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.9□□□□□ -2.11
PDGFRAP16234 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.9□□□□□ -2.11
PDGFRAP16234 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
PDGFRAP16234 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.9□□□□□ -2.11
PDGFRAP16234 ACA59.1-201ENST00000515966 143 ntBASIC1.9□□□□□ -2.11
PDGFRAP16234 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.9□□□□□ -2.11
PDGFRAP16234 AC022254.1-201ENST00000567857 235 ntBASIC1.9□□□□□ -2.11
PDGFRAP16234 AP003465.2-201ENST00000602571 373 ntBASIC1.9□□□□□ -2.11
PDGFRAP16234 AP000907.4-201ENST00000604143 237 ntBASIC1.9□□□□□ -2.11
PDGFRAP16234 AC122108.2-201ENST00000611946 526 ntBASIC1.9□□□□□ -2.11
PDGFRAP16234 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.9□□□□□ -2.11
PDGFRAP16234 AC007014.2-201ENST00000615581 479 ntBASIC1.9□□□□□ -2.11
PDGFRAP16234 AL359697.1-201ENST00000624879 587 ntBASIC1.9□□□□□ -2.11
PDGFRAP16234 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
PDGFRAP16234 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PDGFRAP16234 Y_RNA.132-201ENST00000363421 102 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 MIR9-3-201ENST00000385084 90 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 AL033519.2-201ENST00000403958 392 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 CYCSP49-201ENST00000420810 319 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 AL358453.1-201ENST00000422522 250 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 MTND4LP16-201ENST00000440828 295 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 AC004386.2-201ENST00000441858 148 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.89□□□□□ -2.11
PDGFRAP16234 snoU13.23-201ENST00000458863 104 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 RPS29P11-201ENST00000496507 171 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PDGFRAP16234 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.89□□□□□ -2.11
PDGFRAP16234 RNVU1-2-201ENST00000516326 135 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 RNU6-1088P-201ENST00000516850 104 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 MIR4419B-201ENST00000577260 68 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 SNRPGP20-201ENST00000604477 205 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 AC084782.3-201ENST00000612282 578 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 AC022513.1-201ENST00000624512 117 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PDGFRAP16234 BX322639.1-202ENST00000423987 2213 ntBASIC1.89□□□□□ -2.11
PDGFRAP16234 MTND5P9-201ENST00000503854 1755 ntBASIC1.88□□□□□ -2.11
PDGFRAP16234 RNU6-545P-201ENST00000362681 104 ntBASIC1.88□□□□□ -2.11
PDGFRAP16234 U8.10-201ENST00000384260 133 ntBASIC1.88□□□□□ -2.11
PDGFRAP16234 SNORA26.9-201ENST00000391322 122 ntBASIC1.88□□□□□ -2.11
PDGFRAP16234 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
PDGFRAP16234 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PDGFRAP16234 Z82205.1-201ENST00000428456 297 ntBASIC1.88□□□□□ -2.11
PDGFRAP16234 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.88□□□□□ -2.11
PDGFRAP16234 AL357134.1-201ENST00000445848 426 ntBASIC1.88□□□□□ -2.11
PDGFRAP16234 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.88□□□□□ -2.11
PDGFRAP16234 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.88□□□□□ -2.11
PDGFRAP16234 AC010531.2-201ENST00000465012 153 ntBASIC1.88□□□□□ -2.11
PDGFRAP16234 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.88□□□□□ -2.11
PDGFRAP16234 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.88□□□□□ -2.11
PDGFRAP16234 HSBP1P1-201ENST00000555205 166 ntBASIC1.88□□□□□ -2.11
PDGFRAP16234 DEFB122-202ENST00000569013 197 ntBASIC1.88□□□□□ -2.11
PDGFRAP16234 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.88□□□□□ -2.11
PDGFRAP16234 MIR4524B-201ENST00000581569 115 ntBASIC1.88□□□□□ -2.11
PDGFRAP16234 MIR4713-201ENST00000582691 75 ntBASIC1.88□□□□□ -2.11
PDGFRAP16234 MIR5006-201ENST00000583027 110 ntBASIC1.88□□□□□ -2.11
PDGFRAP16234 AC010900.2-201ENST00000604508 210 ntBASIC1.88□□□□□ -2.11
PDGFRAP16234 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.88□□□□□ -2.11
PDGFRAP16234 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.88□□□□□ -2.11
PDGFRAP16234 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.88□□□□□ -2.11
PDGFRAP16234 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.88□□□□□ -2.11
PDGFRAP16234 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
PDGFRAP16234 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.88□□□□□ -2.11
PDGFRAP16234 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PDGFRAP16234 MTND4P5-201ENST00000435821 1374 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 SNORD115-32-201ENST00000364079 82 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 RNU4-9P-201ENST00000364951 139 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 Y_RNA.301-201ENST00000364990 103 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.87□□□□□ -2.11
PDGFRAP16234 MIR1283-1-201ENST00000408494 87 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 RNA5SP100-201ENST00000410903 110 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 RNA5SP59-201ENST00000410922 110 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 MTCO3P46-201ENST00000425787 232 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 AC007677.1-201ENST00000445757 515 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 AC009237.7-201ENST00000447357 229 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 MTCO3P8-201ENST00000453691 755 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 RNA5SP57-201ENST00000459463 123 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 AC108210.2-201ENST00000503681 201 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 AC067942.3-201ENST00000512025 362 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 RNU6-566P-201ENST00000516790 107 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 RNU6-548P-201ENST00000517083 115 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 RNA5SP454-201ENST00000517231 127 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.87□□□□□ -2.11
PDGFRAP16234 AP003033.1-201ENST00000527244 415 ntBASIC1.87□□□□□ -2.11
PDGFRAP16234 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms