Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 AC016632.1-201ENST00000503994 196 ntBASIC0.25□□□□□ -2.37
HLA-EP13747 SNORA19.3-201ENST00000516165 130 ntBASIC0.25□□□□□ -2.37
HLA-EP13747 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.25□□□□□ -2.37
HLA-EP13747 AC007834.2-201ENST00000536310 343 ntBASIC0.25□□□□□ -2.37
HLA-EP13747 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.25□□□□□ -2.37
HLA-EP13747 MTND3P19-201ENST00000603825 345 ntBASIC0.25□□□□□ -2.37
HLA-EP13747 AC112187.2-201ENST00000604345 283 ntBASIC0.25□□□□□ -2.37
HLA-EP13747 AL592221.1-201ENST00000605266 382 ntBASIC0.25□□□□□ -2.37
HLA-EP13747 AC012557.2-201ENST00000605919 418 ntBASIC0.25□□□□□ -2.37
HLA-EP13747 MIR6718-201ENST00000616153 80 ntBASIC0.25□□□□□ -2.37
HLA-EP13747 AL450472.1-202ENST00000637286 180 ntBASIC0.25□□□□□ -2.37
HLA-EP13747 RNU6-428P-201ENST00000362942 107 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 Y_RNA.287-201ENST00000364853 94 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 Y_RNA.476-201ENST00000384347 108 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 RNA5SP323-201ENST00000391094 133 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 SNORA75.2-201ENST00000391138 150 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 SNORA75.3-201ENST00000391231 150 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 RNA5SP467-201ENST00000391274 118 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.24□□□□□ -2.37
HLA-EP13747 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.24□□□□□ -2.37
HLA-EP13747 EEF1A1P39-201ENST00000440791 250 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 RNU7-90P-201ENST00000459216 62 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.24□□□□□ -2.37
HLA-EP13747 HMGB1P29-201ENST00000505659 499 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 RNU6-1146P-201ENST00000516282 102 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 RNU6-567P-201ENST00000516746 107 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 AC010376.1-201ENST00000522101 334 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 MIR4753-201ENST00000585119 83 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 AC005520.5-201ENST00000613926 164 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 AL513423.1-201ENST00000621695 132 ntBASIC0.24□□□□□ -2.37
HLA-EP13747 CASC19-280ENST00000642102 1351 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
HLA-EP13747 SNORD116-13-201ENST00000384408 92 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 RNU6-1237P-201ENST00000384777 107 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 AL355796.1-201ENST00000406706 323 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 MIR1265-201ENST00000408444 86 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 SNORD99-201ENST00000408612 74 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.23□□□□□ -2.37
HLA-EP13747 SNAP23P1-201ENST00000433229 246 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 AC016717.1-201ENST00000448918 286 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.23□□□□□ -2.37
HLA-EP13747 AC233266.1-201ENST00000454518 96 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 AL049830.1-201ENST00000468034 425 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.23□□□□□ -2.37
HLA-EP13747 AC117522.1-201ENST00000509821 380 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 RNU6-276P-201ENST00000516114 96 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
HLA-EP13747 DEFB131C-201ENST00000528817 165 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 AL356157.2-201ENST00000605122 111 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 Z99289.3-201ENST00000605586 594 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 AL360219.1-201ENST00000610230 366 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 AC242852.1-201ENST00000612151 96 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 AC244015.1-201ENST00000622301 99 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 AC019226.2-201ENST00000625973 424 ntBASIC0.23□□□□□ -2.37
HLA-EP13747 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.23□□□□□ -2.37
HLA-EP13747 Y_RNA.110-201ENST00000363220 99 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 Y_RNA.324-201ENST00000365165 102 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 RNU6-61P-201ENST00000365528 109 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 Y_RNA.390-201ENST00000383932 102 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 SNORA36A-201ENST00000384221 132 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 MIR653-201ENST00000385279 96 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 RNU2-39P-201ENST00000410604 198 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.22□□□□□ -2.37
HLA-EP13747 AC007283.2-201ENST00000424739 197 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 MTCO2P12-201ENST00000427426 682 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 RPL22P17-201ENST00000438729 315 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.22□□□□□ -2.37
HLA-EP13747 AL606662.1-201ENST00000445763 553 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 AL031313.1-201ENST00000448435 256 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 RPL39P39-201ENST00000455840 151 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.22□□□□□ -2.37
HLA-EP13747 RNA5SP134-201ENST00000516492 96 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 RNU6-1069P-201ENST00000516612 133 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 AC109479.2-201ENST00000517842 174 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
HLA-EP13747 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.22□□□□□ -2.37
HLA-EP13747 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 AC022217.4-201ENST00000604389 163 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 AC013244.3-201ENST00000605614 388 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 AC080013.3-201ENST00000606839 578 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 AC104458.1-201ENST00000608243 463 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.22□□□□□ -2.37
HLA-EP13747 MIR8054-201ENST00000620877 86 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 AC006001.4-201ENST00000622243 395 ntBASIC0.22□□□□□ -2.37
HLA-EP13747 RNU6-562P-201ENST00000362731 107 ntBASIC0.21□□□□□ -2.38
HLA-EP13747 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
HLA-EP13747 RNU6-641P-201ENST00000384006 107 ntBASIC0.21□□□□□ -2.38
HLA-EP13747 Y_RNA.504-201ENST00000384481 104 ntBASIC0.21□□□□□ -2.38
HLA-EP13747 MIR660-201ENST00000385235 97 ntBASIC0.21□□□□□ -2.38
HLA-EP13747 SNORA12.1-201ENST00000390873 148 ntBASIC0.21□□□□□ -2.38
HLA-EP13747 MTND3P1-201ENST00000441336 220 ntBASIC0.21□□□□□ -2.38
HLA-EP13747 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.21□□□□□ -2.38
HLA-EP13747 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.21□□□□□ -2.38
HLA-EP13747 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.21□□□□□ -2.38
HLA-EP13747 RNU6-948P-201ENST00000516374 107 ntBASIC0.21□□□□□ -2.38
HLA-EP13747 AC023050.3-201ENST00000541142 333 ntBASIC0.21□□□□□ -2.38
HLA-EP13747 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.21□□□□□ -2.38
HLA-EP13747 MIR5190-201ENST00000581537 80 ntBASIC0.21□□□□□ -2.38
HLA-EP13747 AC064807.4-201ENST00000607201 407 ntBASIC0.21□□□□□ -2.38
HLA-EP13747 AP000484.1-201ENST00000620067 1252 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms