Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 SNORD115-28-201ENST00000363931 81 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 SNORD31B-201ENST00000364977 69 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 RNA5SP504-201ENST00000410676 117 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 MTCO1P21-201ENST00000416634 589 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.23□□□□□ -2.45
COL6A3P12111 AL162725.1-201ENST00000435405 301 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 AL133217.1-201ENST00000450980 425 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 NDUFA5P7-201ENST00000452914 242 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
COL6A3P12111 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.23□□□□□ -2.45
COL6A3P12111 AC074133.1-201ENST00000515696 183 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.23□□□□□ -2.45
COL6A3P12111 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.23□□□□□ -2.45
COL6A3P12111 MIR3612-201ENST00000579753 87 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.23□□□□□ -2.45
COL6A3P12111 RNU6-167P-201ENST00000384292 106 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 MIR106A-201ENST00000384870 81 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 MIR643-201ENST00000385267 97 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 MIR760-201ENST00000390220 80 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.23□□□□□ -2.45
COL6A3P12111 MTATP6P30-201ENST00000443540 664 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.23□□□□□ -2.45
COL6A3P12111 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.23□□□□□ -2.45
COL6A3P12111 AC090049.2-201ENST00000550377 109 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 MIR4743-201ENST00000584576 69 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 AL451064.1-201ENST00000607718 471 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 AC104985.3-201ENST00000623479 597 ntBASIC-0.23□□□□□ -2.45
COL6A3P12111 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
COL6A3P12111 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
COL6A3P12111 RNU6-679P-201ENST00000391003 106 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.24□□□□□ -2.45
COL6A3P12111 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL6A3P12111 ELOCP30-201ENST00000447108 299 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.24□□□□□ -2.45
COL6A3P12111 RNU6-917P-201ENST00000516294 104 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 RNA5SP268-201ENST00000516828 124 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 AC011979.2-201ENST00000527568 352 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 AC011195.1-201ENST00000578177 177 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 AC117490.2-201ENST00000610042 594 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 AC007014.2-201ENST00000615581 479 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 uc_338.16-201ENST00000621804 95 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 U6.99-201ENST00000637524 83 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.24□□□□□ -2.45
COL6A3P12111 MIR1-1-201ENST00000362147 71 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 SNORD32A-201ENST00000364805 84 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 MIR520G-201ENST00000385064 90 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 MIR520H-201ENST00000385126 88 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 SNORA40C-201ENST00000391285 128 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 SNORA40.8-201ENST00000411034 126 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 RNA5SP216-201ENST00000516111 123 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 SUMO2P18-201ENST00000518873 252 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.24□□□□□ -2.45
COL6A3P12111 AL357094.1-201ENST00000603845 844 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 AL357078.3-201ENST00000607528 618 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 MIR412-201ENST00000362142 91 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 RNU6-754P-201ENST00000391166 107 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL6A3P12111 CCDC58P2-201ENST00000417131 366 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.24□□□□□ -2.45
COL6A3P12111 RNU7-165P-201ENST00000458864 60 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 MED28P2-201ENST00000475771 317 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.24□□□□□ -2.45
COL6A3P12111 AF235103.2-201ENST00000525753 346 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 AC093012.1-202ENST00000549403 582 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 MIR3666-201ENST00000607845 111 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 AC013476.2-201ENST00000614456 459 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 AL445584.3-201ENST00000617173 78 ntBASIC-0.24□□□□□ -2.45
COL6A3P12111 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.25□□□□□ -2.45
COL6A3P12111 MTCO1P19-201ENST00000443487 500 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.25□□□□□ -2.45
COL6A3P12111 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.25□□□□□ -2.45
COL6A3P12111 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.25□□□□□ -2.45
COL6A3P12111 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.25□□□□□ -2.45
COL6A3P12111 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.25□□□□□ -2.45
COL6A3P12111 AL355073.2-201ENST00000612106 557 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 AC092608.3-201ENST00000625017 386 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 RNU4-21P-201ENST00000362802 126 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 RNA5SP517-201ENST00000364724 117 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 RNY4P16-201ENST00000364768 94 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 SNORD14C-201ENST00000365382 88 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 MIR573-201ENST00000384964 99 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 RNU6-269P-201ENST00000391077 97 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 MTATP6P16-201ENST00000434543 526 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.25□□□□□ -2.45
COL6A3P12111 snoU13.14-201ENST00000459372 104 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 RNU2-53P-201ENST00000516257 147 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.25□□□□□ -2.45
COL6A3P12111 TPRKBP2-201ENST00000565969 475 ntBASIC-0.25□□□□□ -2.45
COL6A3P12111 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.25□□□□□ -2.45
COL6A3P12111 AC015726.2-201ENST00000620112 122 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms