Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MTCO2P6-201ENST00000463134 685 ntBASIC0.38□□□□□ -2.35
CTSDP07339 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.38□□□□□ -2.35
CTSDP07339 AC079382.1-201ENST00000493346 557 ntBASIC0.38□□□□□ -2.35
CTSDP07339 RNA5SP121-201ENST00000516537 101 ntBASIC0.38□□□□□ -2.35
CTSDP07339 RNU6-229P-201ENST00000516614 102 ntBASIC0.38□□□□□ -2.35
CTSDP07339 AC016957.1-201ENST00000534895 309 ntBASIC0.38□□□□□ -2.35
CTSDP07339 APOOP3-201ENST00000536787 586 ntBASIC0.38□□□□□ -2.35
CTSDP07339 AC026470.2-201ENST00000561492 181 ntBASIC0.38□□□□□ -2.35
CTSDP07339 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.38□□□□□ -2.35
CTSDP07339 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.38□□□□□ -2.35
CTSDP07339 AC005771.1-201ENST00000585581 349 ntBASIC0.38□□□□□ -2.35
CTSDP07339 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.38□□□□□ -2.35
CTSDP07339 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.38□□□□□ -2.35
CTSDP07339 AL158050.2-201ENST00000605336 568 ntBASIC0.38□□□□□ -2.35
CTSDP07339 AL353765.1-201ENST00000605514 183 ntBASIC0.38□□□□□ -2.35
CTSDP07339 AC009229.3-201ENST00000608056 282 ntBASIC0.38□□□□□ -2.35
CTSDP07339 AC022418.1-201ENST00000624118 445 ntBASIC0.38□□□□□ -2.35
CTSDP07339 AL442644.1-201ENST00000454390 3105 ntBASIC0.37□□□□□ -2.35
CTSDP07339 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
CTSDP07339 RNA5SP499-201ENST00000363982 119 ntBASIC0.37□□□□□ -2.35
CTSDP07339 Y_RNA.367-201ENST00000365544 101 ntBASIC0.37□□□□□ -2.35
CTSDP07339 RNY1P14-201ENST00000384426 108 ntBASIC0.37□□□□□ -2.35
CTSDP07339 SNORA12.1-201ENST00000390873 148 ntBASIC0.37□□□□□ -2.35
CTSDP07339 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.37□□□□□ -2.35
CTSDP07339 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.37□□□□□ -2.35
CTSDP07339 AC092628.1-201ENST00000436250 252 ntBASIC0.37□□□□□ -2.35
CTSDP07339 NFU1P2-201ENST00000448700 469 ntBASIC0.37□□□□□ -2.35
CTSDP07339 AC074290.1-201ENST00000448883 135 ntBASIC0.37□□□□□ -2.35
CTSDP07339 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.37□□□□□ -2.35
CTSDP07339 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.37□□□□□ -2.35
CTSDP07339 RNU6-1069P-201ENST00000516612 133 ntBASIC0.37□□□□□ -2.35
CTSDP07339 RNU1-142P-201ENST00000516682 145 ntBASIC0.37□□□□□ -2.35
CTSDP07339 AC007834.2-201ENST00000536310 343 ntBASIC0.37□□□□□ -2.35
CTSDP07339 SNORA4-201ENST00000584302 138 ntBASIC0.37□□□□□ -2.35
CTSDP07339 AC146944.4-201ENST00000602697 718 ntBASIC0.37□□□□□ -2.35
CTSDP07339 MIR8054-201ENST00000620877 86 ntBASIC0.37□□□□□ -2.35
CTSDP07339 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.37□□□□□ -2.35
CTSDP07339 AC106754.2-201ENST00000623006 233 ntBASIC0.37□□□□□ -2.35
CTSDP07339 AL603839.4-201ENST00000624658 1005 ntBASIC0.37□□□□□ -2.35
CTSDP07339 AC006927.3-201ENST00000638789 384 ntBASIC0.37□□□□□ -2.35
CTSDP07339 AC099654.13-201ENST00000639774 207 ntBASIC0.37□□□□□ -2.35
CTSDP07339 RNU4-76P-201ENST00000364509 141 ntBASIC0.36□□□□□ -2.35
CTSDP07339 RNU1-133P-201ENST00000364867 167 ntBASIC0.36□□□□□ -2.35
CTSDP07339 RNU4-12P-201ENST00000365233 139 ntBASIC0.36□□□□□ -2.35
CTSDP07339 MIR653-201ENST00000385279 96 ntBASIC0.36□□□□□ -2.35
CTSDP07339 RNU4-46P-201ENST00000410818 138 ntBASIC0.36□□□□□ -2.35
CTSDP07339 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
CTSDP07339 AC098934.3-201ENST00000430450 190 ntBASIC0.36□□□□□ -2.35
CTSDP07339 AC004386.2-201ENST00000441858 148 ntBASIC0.36□□□□□ -2.35
CTSDP07339 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.36□□□□□ -2.35
CTSDP07339 MTATP6P14-201ENST00000455189 673 ntBASIC0.36□□□□□ -2.35
CTSDP07339 RNU4-54P-201ENST00000516428 129 ntBASIC0.36□□□□□ -2.35
CTSDP07339 SNORA25.17-201ENST00000517184 124 ntBASIC0.36□□□□□ -2.35
CTSDP07339 AC090572.1-201ENST00000519251 160 ntBASIC0.36□□□□□ -2.35
CTSDP07339 AC022878.1-201ENST00000530684 149 ntBASIC0.36□□□□□ -2.35
CTSDP07339 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
CTSDP07339 AC016256.1-201ENST00000547971 354 ntBASIC0.36□□□□□ -2.35
CTSDP07339 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.36□□□□□ -2.35
CTSDP07339 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.36□□□□□ -2.35
CTSDP07339 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.36□□□□□ -2.35
CTSDP07339 MIR5006-201ENST00000583027 110 ntBASIC0.36□□□□□ -2.35
CTSDP07339 AC080078.2-201ENST00000603766 501 ntBASIC0.36□□□□□ -2.35
CTSDP07339 AC112191.3-201ENST00000604371 277 ntBASIC0.36□□□□□ -2.35
CTSDP07339 AC022217.4-201ENST00000604389 163 ntBASIC0.36□□□□□ -2.35
CTSDP07339 TCL6_2.1-201ENST00000615162 119 ntBASIC0.36□□□□□ -2.35
CTSDP07339 AL078595.3-201ENST00000623815 1166 ntBASIC0.36□□□□□ -2.35
CTSDP07339 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.36□□□□□ -2.35
CTSDP07339 RNU6-434P-201ENST00000384376 107 ntBASIC0.35□□□□□ -2.35
CTSDP07339 RNU6-393P-201ENST00000384475 107 ntBASIC0.35□□□□□ -2.35
CTSDP07339 MIR10B-201ENST00000385011 110 ntBASIC0.35□□□□□ -2.35
CTSDP07339 MIR122-201ENST00000385044 85 ntBASIC0.35□□□□□ -2.35
CTSDP07339 MIR660-201ENST00000385235 97 ntBASIC0.35□□□□□ -2.35
CTSDP07339 MIR518E-201ENST00000385252 88 ntBASIC0.35□□□□□ -2.35
CTSDP07339 SNORD41-201ENST00000386967 70 ntBASIC0.35□□□□□ -2.35
CTSDP07339 AL034345.1-201ENST00000407768 123 ntBASIC0.35□□□□□ -2.35
CTSDP07339 CDK8P2-201ENST00000415020 547 ntBASIC0.35□□□□□ -2.35
CTSDP07339 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.35□□□□□ -2.35
CTSDP07339 AL035398.1-201ENST00000430869 322 ntBASIC0.35□□□□□ -2.35
CTSDP07339 AL596276.1-201ENST00000434465 418 ntBASIC0.35□□□□□ -2.35
CTSDP07339 AL512286.1-201ENST00000439244 400 ntBASIC0.35□□□□□ -2.35
CTSDP07339 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.35□□□□□ -2.35
CTSDP07339 AL606662.1-201ENST00000445763 553 ntBASIC0.35□□□□□ -2.35
CTSDP07339 EPS15P1-201ENST00000448836 336 ntBASIC0.35□□□□□ -2.35
CTSDP07339 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.35□□□□□ -2.35
CTSDP07339 USP9YP12-201ENST00000450481 570 ntBASIC0.35□□□□□ -2.35
CTSDP07339 HMGB1P29-201ENST00000505659 499 ntBASIC0.35□□□□□ -2.35
CTSDP07339 RNU6-947P-201ENST00000516264 106 ntBASIC0.35□□□□□ -2.35
CTSDP07339 RNU6-410P-201ENST00000517006 107 ntBASIC0.35□□□□□ -2.35
CTSDP07339 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.35□□□□□ -2.35
CTSDP07339 MTND4P33-201ENST00000556706 766 ntBASIC0.35□□□□□ -2.35
CTSDP07339 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.35□□□□□ -2.35
CTSDP07339 AP001596.2-201ENST00000608410 312 ntBASIC0.35□□□□□ -2.35
CTSDP07339 AL359075.3-201ENST00000613288 217 ntBASIC0.35□□□□□ -2.35
CTSDP07339 AL133173.2-201ENST00000614270 90 ntBASIC0.35□□□□□ -2.35
CTSDP07339 AC027807.2-201ENST00000616099 408 ntBASIC0.35□□□□□ -2.35
CTSDP07339 RMST_2.1-201ENST00000617263 136 ntBASIC0.35□□□□□ -2.35
CTSDP07339 AC073349.3-201ENST00000617616 186 ntBASIC0.35□□□□□ -2.35
CTSDP07339 MIR6513-201ENST00000621188 64 ntBASIC0.35□□□□□ -2.35
CTSDP07339 MIR5087-201ENST00000635826 76 ntBASIC0.35□□□□□ -2.35
CTSDP07339 U6.108-201ENST00000637764 58 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms