Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU6-991P-201ENST00000516168 107 ntBASIC2.06□□□□□ -2.08
VTNP04004 RNU6-965P-201ENST00000516721 96 ntBASIC2.06□□□□□ -2.08
VTNP04004 SNORA48.11-201ENST00000517015 89 ntBASIC2.06□□□□□ -2.08
VTNP04004 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.06□□□□□ -2.08
VTNP04004 CYP4A27P-201ENST00000567218 190 ntBASIC2.06□□□□□ -2.08
VTNP04004 AL117336.2-201ENST00000602435 335 ntBASIC2.06□□□□□ -2.08
VTNP04004 AL359697.1-201ENST00000624879 587 ntBASIC2.06□□□□□ -2.08
VTNP04004 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VTNP04004 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VTNP04004 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VTNP04004 RNU6-944P-201ENST00000364023 107 ntBASIC2.05□□□□□ -2.08
VTNP04004 MIR32-201ENST00000384965 70 ntBASIC2.05□□□□□ -2.08
VTNP04004 MIR29B2-201ENST00000385055 81 ntBASIC2.05□□□□□ -2.08
VTNP04004 MIR561-201ENST00000385216 97 ntBASIC2.05□□□□□ -2.08
VTNP04004 MIR549A-201ENST00000385268 96 ntBASIC2.05□□□□□ -2.08
VTNP04004 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
VTNP04004 AC009238.1-201ENST00000442165 424 ntBASIC2.05□□□□□ -2.08
VTNP04004 AC009237.6-201ENST00000446969 424 ntBASIC2.05□□□□□ -2.08
VTNP04004 AC011753.1-201ENST00000451001 220 ntBASIC2.05□□□□□ -2.08
VTNP04004 AC018868.1-201ENST00000491307 315 ntBASIC2.05□□□□□ -2.08
VTNP04004 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.05□□□□□ -2.08
VTNP04004 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.05□□□□□ -2.08
VTNP04004 MIR449C-201ENST00000516047 92 ntBASIC2.05□□□□□ -2.08
VTNP04004 Y_RNA.718-201ENST00000517110 102 ntBASIC2.05□□□□□ -2.08
VTNP04004 RNU6-264P-201ENST00000517134 104 ntBASIC2.05□□□□□ -2.08
VTNP04004 CYCSP26-201ENST00000534107 320 ntBASIC2.05□□□□□ -2.08
VTNP04004 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.05□□□□□ -2.08
VTNP04004 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.05□□□□□ -2.08
VTNP04004 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.05□□□□□ -2.08
VTNP04004 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.05□□□□□ -2.08
VTNP04004 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.05□□□□□ -2.08
VTNP04004 AC126177.8-201ENST00000618339 1015 ntBASIC2.05□□□□□ -2.08
VTNP04004 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.05□□□□□ -2.08
VTNP04004 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.05□□□□□ -2.08
VTNP04004 AP000553.5-201ENST00000641933 54 ntBASIC2.05□□□□□ -2.08
VTNP04004 ZNF299P-201ENST00000406845 1804 ntBASIC2.05□□□□□ -2.08
VTNP04004 ZNF72P-201ENST00000425869 1908 ntBASIC2.05□□□□□ -2.08
VTNP04004 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
VTNP04004 RNU4-79P-201ENST00000362764 141 ntBASIC2.04□□□□□ -2.08
VTNP04004 RNU5B-2P-201ENST00000363036 113 ntBASIC2.04□□□□□ -2.08
VTNP04004 RNY1P16-201ENST00000363063 111 ntBASIC2.04□□□□□ -2.08
VTNP04004 RNU6-743P-201ENST00000364151 106 ntBASIC2.04□□□□□ -2.08
VTNP04004 SNORD116-29-201ENST00000384516 83 ntBASIC2.04□□□□□ -2.08
VTNP04004 SNORA46.1-201ENST00000391069 153 ntBASIC2.04□□□□□ -2.08
VTNP04004 SNORA26.3-201ENST00000391119 136 ntBASIC2.04□□□□□ -2.08
VTNP04004 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
VTNP04004 MTND3P23-201ENST00000431980 347 ntBASIC2.04□□□□□ -2.08
VTNP04004 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.04□□□□□ -2.08
VTNP04004 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.04□□□□□ -2.08
VTNP04004 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.04□□□□□ -2.08
VTNP04004 TOMM22P6-201ENST00000465035 409 ntBASIC2.04□□□□□ -2.08
VTNP04004 AC079804.2-201ENST00000490376 200 ntBASIC2.04□□□□□ -2.08
VTNP04004 AC097473.1-201ENST00000508142 408 ntBASIC2.04□□□□□ -2.08
VTNP04004 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.04□□□□□ -2.08
VTNP04004 RNU6-307P-201ENST00000516743 106 ntBASIC2.04□□□□□ -2.08
VTNP04004 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.04□□□□□ -2.08
VTNP04004 AL590705.4-201ENST00000532209 134 ntBASIC2.04□□□□□ -2.08
VTNP04004 AC121758.2-201ENST00000553271 193 ntBASIC2.04□□□□□ -2.08
VTNP04004 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.04□□□□□ -2.08
VTNP04004 AC009127.3-201ENST00000570531 403 ntBASIC2.04□□□□□ -2.08
VTNP04004 MIR5696-201ENST00000578474 85 ntBASIC2.04□□□□□ -2.08
VTNP04004 AC005899.2-201ENST00000584353 90 ntBASIC2.04□□□□□ -2.08
VTNP04004 C8orf59P2-201ENST00000603441 271 ntBASIC2.04□□□□□ -2.08
VTNP04004 MIR8081-201ENST00000611533 95 ntBASIC2.04□□□□□ -2.08
VTNP04004 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.04□□□□□ -2.08
VTNP04004 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
VTNP04004 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
VTNP04004 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VTNP04004 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VTNP04004 RNU6-797P-201ENST00000363101 109 ntBASIC2.03□□□□□ -2.08
VTNP04004 U3.9-201ENST00000363823 204 ntBASIC2.03□□□□□ -2.08
VTNP04004 RNU4-9P-201ENST00000364951 139 ntBASIC2.03□□□□□ -2.08
VTNP04004 Y_RNA.405-201ENST00000383979 100 ntBASIC2.03□□□□□ -2.08
VTNP04004 RNU6-890P-201ENST00000384121 107 ntBASIC2.03□□□□□ -2.08
VTNP04004 Y_RNA.451-201ENST00000384200 100 ntBASIC2.03□□□□□ -2.08
VTNP04004 Y_RNA.524-201ENST00000384564 100 ntBASIC2.03□□□□□ -2.08
VTNP04004 Y_RNA.561-201ENST00000384694 100 ntBASIC2.03□□□□□ -2.08
VTNP04004 MIR487A-201ENST00000385009 80 ntBASIC2.03□□□□□ -2.08
VTNP04004 RNY4P36-201ENST00000391116 96 ntBASIC2.03□□□□□ -2.08
VTNP04004 RNU2-32P-201ENST00000411193 191 ntBASIC2.03□□□□□ -2.08
VTNP04004 AL358453.1-201ENST00000422522 250 ntBASIC2.03□□□□□ -2.08
VTNP04004 MTCO3P29-201ENST00000432119 779 ntBASIC2.03□□□□□ -2.08
VTNP04004 AL445305.1-201ENST00000432577 575 ntBASIC2.03□□□□□ -2.08
VTNP04004 snoU13.30-201ENST00000458951 104 ntBASIC2.03□□□□□ -2.08
VTNP04004 SNORD19B-201ENST00000459623 84 ntBASIC2.03□□□□□ -2.08
VTNP04004 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.03□□□□□ -2.08
VTNP04004 AC093303.1-201ENST00000514549 295 ntBASIC2.03□□□□□ -2.08
VTNP04004 RNU7-175P-201ENST00000515915 61 ntBASIC2.03□□□□□ -2.08
VTNP04004 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.03□□□□□ -2.08
VTNP04004 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.03□□□□□ -2.08
VTNP04004 AC016256.1-201ENST00000547971 354 ntBASIC2.03□□□□□ -2.08
VTNP04004 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.03□□□□□ -2.08
VTNP04004 AC010928.2-201ENST00000588017 287 ntBASIC2.03□□□□□ -2.08
VTNP04004 AC005014.2-201ENST00000607795 599 ntBASIC2.03□□□□□ -2.08
VTNP04004 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.03□□□□□ -2.08
VTNP04004 PCGEM1.1-201ENST00000613431 131 ntBASIC2.03□□□□□ -2.08
VTNP04004 AC133104.2-201ENST00000615272 193 ntBASIC2.03□□□□□ -2.08
VTNP04004 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.03□□□□□ -2.08
VTNP04004 AC084768.2-201ENST00000622736 221 ntBASIC2.03□□□□□ -2.08
VTNP04004 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms