Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL3A1P02461 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL3A1P02461 RNU6-1301P-201ENST00000362724 104 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 Y_RNA.304-201ENST00000365011 112 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 RNU6-81P-201ENST00000365608 104 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 RNU6-356P-201ENST00000384140 107 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 SNORA64-201ENST00000384674 134 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 U3.37-201ENST00000408528 213 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.93□□□□□ -1.94
COL3A1P02461 RNA5SP239-201ENST00000410218 129 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 RNU2-2P-201ENST00000410396 191 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.93□□□□□ -1.94
COL3A1P02461 AC124916.1-201ENST00000444020 547 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.93□□□□□ -1.94
COL3A1P02461 HSPE1P25-201ENST00000455484 251 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 U8.22-201ENST00000459141 133 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 RPL23AP62-201ENST00000463396 453 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 AL160314.1-201ENST00000490836 438 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 SNORD116-26-201ENST00000516006 96 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 RNA5SP200-201ENST00000516360 103 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 Y_RNA.679-201ENST00000516416 91 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 RNU2-31P-201ENST00000516954 155 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.93□□□□□ -1.94
COL3A1P02461 AL161713.1-201ENST00000555538 145 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 U2.15-201ENST00000611544 191 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 U2.16-201ENST00000613119 191 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 U2.12-201ENST00000613778 191 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 U2.20-201ENST00000613956 192 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 U2.9-201ENST00000615427 191 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 U2.11-201ENST00000616345 191 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 U2.2-201ENST00000616535 191 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 U2.3-201ENST00000617785 191 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 U2.19-201ENST00000618602 191 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 RNU2-1-201ENST00000618664 191 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 U2.6-201ENST00000619225 191 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 U2.5-201ENST00000619465 191 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 U2.10-201ENST00000620268 191 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL3A1P02461 ZNF355P-201ENST00000427301 3216 ntBASIC2.93□□□□□ -1.94
COL3A1P02461 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL3A1P02461 AC091152.2-201ENST00000591628 2569 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 DEFB108F-201ENST00000344638 222 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 RNU6-428P-201ENST00000362942 107 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 SNORD14B-201ENST00000364533 90 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 RNU6-740P-201ENST00000364734 105 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 RNU4-9P-201ENST00000364951 139 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 SNORD6-201ENST00000365444 73 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 MIR10A-201ENST00000385043 110 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 RNU5A-5P-201ENST00000411054 116 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 EIF1P2-201ENST00000428233 350 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.92□□□□□ -1.94
COL3A1P02461 Z82188.1-201ENST00000436709 154 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.92□□□□□ -1.94
COL3A1P02461 AC091021.1-201ENST00000468051 388 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 RPS26P21-201ENST00000475397 348 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.92□□□□□ -1.94
COL3A1P02461 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.92□□□□□ -1.94
COL3A1P02461 RNU6-826P-201ENST00000516827 104 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 AL356575.1-201ENST00000603008 283 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.92□□□□□ -1.94
COL3A1P02461 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.92□□□□□ -1.94
COL3A1P02461 AL360181.4-201ENST00000621752 134 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 AC090617.7-201ENST00000623952 126 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.92□□□□□ -1.94
COL3A1P02461 AC233981.2-201ENST00000611524 1614 ntBASIC2.92□□□□□ -1.94
COL3A1P02461 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.92□□□□□ -1.94
COL3A1P02461 Y_RNA.245-201ENST00000364493 95 ntBASIC2.91□□□□□ -1.94
COL3A1P02461 RNU6-47P-201ENST00000383866 107 ntBASIC2.91□□□□□ -1.94
COL3A1P02461 RNU6-1035P-201ENST00000384477 107 ntBASIC2.91□□□□□ -1.94
COL3A1P02461 Y_RNA.504-201ENST00000384481 104 ntBASIC2.91□□□□□ -1.94
COL3A1P02461 AL358453.1-201ENST00000422522 250 ntBASIC2.91□□□□□ -1.94
COL3A1P02461 RPL21P104-201ENST00000464143 478 ntBASIC2.91□□□□□ -1.94
COL3A1P02461 AL049874.1-201ENST00000489560 388 ntBASIC2.91□□□□□ -1.94
COL3A1P02461 RNU7-200P-201ENST00000516105 62 ntBASIC2.91□□□□□ -1.94
COL3A1P02461 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.91□□□□□ -1.94
COL3A1P02461 AC011476.5-201ENST00000615594 130 ntBASIC2.91□□□□□ -1.94
COL3A1P02461 AC090740.1-201ENST00000623193 2262 ntBASIC2.91□□□□□ -1.94
COL3A1P02461 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.91□□□□□ -1.94
COL3A1P02461 OR4G2P-202ENST00000641004 1759 ntBASIC2.91□□□□□ -1.94
COL3A1P02461 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL3A1P02461 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
COL3A1P02461 RNU5E-7P-201ENST00000365290 117 ntBASIC2.9□□□□□ -1.94
COL3A1P02461 RNU6-102P-201ENST00000384485 104 ntBASIC2.9□□□□□ -1.94
COL3A1P02461 Y_RNA.569-201ENST00000384749 103 ntBASIC2.9□□□□□ -1.94
COL3A1P02461 MIR514A1-201ENST00000385133 98 ntBASIC2.9□□□□□ -1.94
COL3A1P02461 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
COL3A1P02461 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
COL3A1P02461 Y_RNA.590-201ENST00000410140 107 ntBASIC2.9□□□□□ -1.94
COL3A1P02461 RPL19P1-201ENST00000411635 428 ntBASIC2.9□□□□□ -1.94
COL3A1P02461 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
COL3A1P02461 FABP5P15-201ENST00000453566 214 ntBASIC2.9□□□□□ -1.94
COL3A1P02461 TOMM22P6-201ENST00000465035 409 ntBASIC2.9□□□□□ -1.94
COL3A1P02461 MLLT10P2-201ENST00000506434 249 ntBASIC2.9□□□□□ -1.94
COL3A1P02461 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.9□□□□□ -1.94
COL3A1P02461 RNU6-346P-201ENST00000516288 111 ntBASIC2.9□□□□□ -1.94
COL3A1P02461 AC022559.1-201ENST00000520905 205 ntBASIC2.9□□□□□ -1.94
COL3A1P02461 MRPS18CP4-201ENST00000535821 231 ntBASIC2.9□□□□□ -1.94
COL3A1P02461 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.9□□□□□ -1.94
COL3A1P02461 AL353748.2-201ENST00000622148 471 ntBASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms