Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC130509.1-201ENST00000464158 433 ntBASIC1.9□□□□□ -2.11
SIX3O95343 AC087477.1-201ENST00000465747 340 ntBASIC1.9□□□□□ -2.11
SIX3O95343 CPDP1-201ENST00000579660 283 ntBASIC1.9□□□□□ -2.11
SIX3O95343 MIR3935-201ENST00000583472 104 ntBASIC1.9□□□□□ -2.11
SIX3O95343 AC005786.1-201ENST00000588553 154 ntBASIC1.9□□□□□ -2.11
SIX3O95343 7SK.7-201ENST00000603504 247 ntBASIC1.9□□□□□ -2.11
SIX3O95343 SNRPGP20-201ENST00000604477 205 ntBASIC1.9□□□□□ -2.11
SIX3O95343 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SIX3O95343 MIR3662-201ENST00000637030 95 ntBASIC1.9□□□□□ -2.11
SIX3O95343 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.9□□□□□ -2.11
SIX3O95343 RNU6-545P-201ENST00000362681 104 ntBASIC1.89□□□□□ -2.11
SIX3O95343 MIR517A-201ENST00000385001 87 ntBASIC1.89□□□□□ -2.11
SIX3O95343 C8orf59P1-201ENST00000429930 303 ntBASIC1.89□□□□□ -2.11
SIX3O95343 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.89□□□□□ -2.11
SIX3O95343 AC092473.1-201ENST00000441098 221 ntBASIC1.89□□□□□ -2.11
SIX3O95343 AC004386.2-201ENST00000441858 148 ntBASIC1.89□□□□□ -2.11
SIX3O95343 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.89□□□□□ -2.11
SIX3O95343 OR2AQ1P-201ENST00000451972 200 ntBASIC1.89□□□□□ -2.11
SIX3O95343 RNU1-131P-201ENST00000458943 161 ntBASIC1.89□□□□□ -2.11
SIX3O95343 FAM206BP-201ENST00000510179 541 ntBASIC1.89□□□□□ -2.11
SIX3O95343 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.89□□□□□ -2.11
SIX3O95343 RNA5SP364-201ENST00000516938 78 ntBASIC1.89□□□□□ -2.11
SIX3O95343 AP005639.2-201ENST00000527592 928 ntBASIC1.89□□□□□ -2.11
SIX3O95343 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.89□□□□□ -2.11
SIX3O95343 AC011494.1-201ENST00000596454 237 ntBASIC1.89□□□□□ -2.11
SIX3O95343 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.89□□□□□ -2.11
SIX3O95343 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.89□□□□□ -2.11
SIX3O95343 AC016727.2-201ENST00000603988 621 ntBASIC1.89□□□□□ -2.11
SIX3O95343 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.89□□□□□ -2.11
SIX3O95343 DUXAP9-208ENST00000622815 614 ntBASIC1.89□□□□□ -2.11
SIX3O95343 AL159152.1-201ENST00000635019 2587 ntBASIC1.88□□□□□ -2.11
SIX3O95343 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SIX3O95343 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
SIX3O95343 RNU1-76P-201ENST00000362903 159 ntBASIC1.88□□□□□ -2.11
SIX3O95343 RNU5B-2P-201ENST00000363036 113 ntBASIC1.88□□□□□ -2.11
SIX3O95343 RNY1-201ENST00000364228 113 ntBASIC1.88□□□□□ -2.11
SIX3O95343 RNU6-42P-201ENST00000384165 107 ntBASIC1.88□□□□□ -2.11
SIX3O95343 RNU6-784P-201ENST00000384330 106 ntBASIC1.88□□□□□ -2.11
SIX3O95343 RNU6-95P-201ENST00000384697 107 ntBASIC1.88□□□□□ -2.11
SIX3O95343 MIR300-201ENST00000401138 83 ntBASIC1.88□□□□□ -2.11
SIX3O95343 EIF4EP2-201ENST00000422816 654 ntBASIC1.88□□□□□ -2.11
SIX3O95343 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SIX3O95343 AC074290.1-201ENST00000448883 135 ntBASIC1.88□□□□□ -2.11
SIX3O95343 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX3O95343 AC091435.1-201ENST00000505442 584 ntBASIC1.88□□□□□ -2.11
SIX3O95343 AC097473.1-201ENST00000508142 408 ntBASIC1.88□□□□□ -2.11
SIX3O95343 RNU6-718P-201ENST00000516166 105 ntBASIC1.88□□□□□ -2.11
SIX3O95343 MTND1P5-201ENST00000517906 940 ntBASIC1.88□□□□□ -2.11
SIX3O95343 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX3O95343 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.88□□□□□ -2.11
SIX3O95343 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX3O95343 MIR3169-201ENST00000578032 83 ntBASIC1.88□□□□□ -2.11
SIX3O95343 AL109918.3-201ENST00000603072 338 ntBASIC1.88□□□□□ -2.11
SIX3O95343 AL096840.1-201ENST00000603287 93 ntBASIC1.88□□□□□ -2.11
SIX3O95343 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX3O95343 AL138726.1-201ENST00000614873 333 ntBASIC1.88□□□□□ -2.11
SIX3O95343 TCL6_2.1-201ENST00000615162 119 ntBASIC1.88□□□□□ -2.11
SIX3O95343 AC090617.10-201ENST00000624308 134 ntBASIC1.88□□□□□ -2.11
SIX3O95343 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX3O95343 KPNA2P1-201ENST00000458289 1591 ntBASIC1.88□□□□□ -2.11
SIX3O95343 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX3O95343 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SIX3O95343 MIR549A-201ENST00000385268 96 ntBASIC1.87□□□□□ -2.11
SIX3O95343 SNORA48.1-201ENST00000390879 135 ntBASIC1.87□□□□□ -2.11
SIX3O95343 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
SIX3O95343 RNA5SP118-201ENST00000410385 109 ntBASIC1.87□□□□□ -2.11
SIX3O95343 DAP3P1-201ENST00000441522 278 ntBASIC1.87□□□□□ -2.11
SIX3O95343 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.87□□□□□ -2.11
SIX3O95343 AC114982.1-201ENST00000469402 321 ntBASIC1.87□□□□□ -2.11
SIX3O95343 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.87□□□□□ -2.11
SIX3O95343 MIR4713-201ENST00000582691 75 ntBASIC1.87□□□□□ -2.11
SIX3O95343 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.87□□□□□ -2.11
SIX3O95343 AC124303.1-201ENST00000605703 360 ntBASIC1.87□□□□□ -2.11
SIX3O95343 AC090517.2-201ENST00000614966 680 ntBASIC1.87□□□□□ -2.11
SIX3O95343 AC006504.8-201ENST00000621046 635 ntBASIC1.87□□□□□ -2.11
SIX3O95343 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
SIX3O95343 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.87□□□□□ -2.11
SIX3O95343 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SIX3O95343 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
SIX3O95343 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.86□□□□□ -2.11
SIX3O95343 Y_RNA.6-201ENST00000362350 114 ntBASIC1.86□□□□□ -2.11
SIX3O95343 Y_RNA.157-201ENST00000363638 102 ntBASIC1.86□□□□□ -2.11
SIX3O95343 RNU6-534P-201ENST00000364877 106 ntBASIC1.86□□□□□ -2.11
SIX3O95343 SNORA12.2-201ENST00000391040 156 ntBASIC1.86□□□□□ -2.11
SIX3O95343 SNORA17.3-201ENST00000391159 129 ntBASIC1.86□□□□□ -2.11
SIX3O95343 AL033519.2-201ENST00000403958 392 ntBASIC1.86□□□□□ -2.11
SIX3O95343 RNU2-40P-201ENST00000410833 196 ntBASIC1.86□□□□□ -2.11
SIX3O95343 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.86□□□□□ -2.11
SIX3O95343 AC016925.1-201ENST00000458303 298 ntBASIC1.86□□□□□ -2.11
SIX3O95343 AF186996.7-201ENST00000492781 209 ntBASIC1.86□□□□□ -2.11
SIX3O95343 MTCYBP18-201ENST00000501056 747 ntBASIC1.86□□□□□ -2.11
SIX3O95343 MTCO2P30-201ENST00000503662 364 ntBASIC1.86□□□□□ -2.11
SIX3O95343 RNVU1-2-201ENST00000516326 135 ntBASIC1.86□□□□□ -2.11
SIX3O95343 AC087441.2-201ENST00000529141 262 ntBASIC1.86□□□□□ -2.11
SIX3O95343 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.86□□□□□ -2.11
SIX3O95343 MIR5094-201ENST00000578766 85 ntBASIC1.86□□□□□ -2.11
SIX3O95343 MIR4273-201ENST00000582824 84 ntBASIC1.86□□□□□ -2.11
SIX3O95343 MIR3672-201ENST00000584290 82 ntBASIC1.86□□□□□ -2.11
SIX3O95343 RMST_2.1-201ENST00000617263 136 ntBASIC1.86□□□□□ -2.11
SIX3O95343 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms