Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 SRRM1P2-201ENST00000464531 1192 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 RPL36AP21-201ENST00000490372 323 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 AC010486.3-201ENST00000511602 785 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 AC090821.2-201ENST00000523552 176 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.15□□□□□ -2.23
SEMA3DO95025 AC019288.1-201ENST00000557918 224 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.15□□□□□ -2.23
SEMA3DO95025 AC005668.1-201ENST00000571142 476 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 AP005136.1-201ENST00000579765 429 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 AC069114.2-201ENST00000604699 304 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 RPL17P51-201ENST00000605218 238 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 MIR3976-201ENST00000606807 139 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 AC017083.3-201ENST00000609955 700 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 RMST_3.1-201ENST00000611651 109 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 AL353770.2-201ENST00000620024 78 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
SEMA3DO95025 AC010615.1-201ENST00000594254 1764 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.14□□□□□ -2.23
SEMA3DO95025 MIR337-201ENST00000362281 93 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 RNU6-562P-201ENST00000362731 107 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 RNU5B-2P-201ENST00000363036 113 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 RNY1P10-201ENST00000363268 113 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 Y_RNA.123-201ENST00000363338 102 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 AL117342.1-201ENST00000404861 406 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 RNU2-7P-201ENST00000410794 178 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 TIMM9P3-201ENST00000428659 274 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.14□□□□□ -2.23
SEMA3DO95025 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.14□□□□□ -2.23
SEMA3DO95025 RPL26P26-201ENST00000480251 434 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 AC092436.3-201ENST00000511788 257 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 AC104383.1-201ENST00000530297 370 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.14□□□□□ -2.23
SEMA3DO95025 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.14□□□□□ -2.23
SEMA3DO95025 MTND1P15-201ENST00000579262 949 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 RN7SKP299-201ENST00000606679 301 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 AP001330.5-201ENST00000607176 411 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 AC126177.8-201ENST00000618339 1015 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 AC068792.1-201ENST00000621354 417 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 MIR8063-201ENST00000621930 81 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 FER-210ENST00000628534 558 ntTSL 5 BASIC1.14□□□□□ -2.23
SEMA3DO95025 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.14□□□□□ -2.23
SEMA3DO95025 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
SEMA3DO95025 AC100821.1-201ENST00000523153 2479 ntBASIC1.14□□□□□ -2.23
SEMA3DO95025 RNU6-82P-201ENST00000363970 107 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 SNORA69-201ENST00000383895 132 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 RNY3P9-201ENST00000384727 106 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 RNA5SP494-201ENST00000410653 129 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 ARL5AP1-201ENST00000418991 388 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.13□□□□□ -2.23
SEMA3DO95025 CST2P1-201ENST00000425770 87 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.13□□□□□ -2.23
SEMA3DO95025 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.13□□□□□ -2.23
SEMA3DO95025 JTBP1-201ENST00000441314 247 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 AC004386.2-201ENST00000441858 148 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.13□□□□□ -2.23
SEMA3DO95025 AC016717.1-201ENST00000448918 286 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 RNA5SP384-201ENST00000516615 116 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 RNU6-856P-201ENST00000516959 98 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 AC026407.1-201ENST00000518369 204 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.13□□□□□ -2.23
SEMA3DO95025 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.13□□□□□ -2.23
SEMA3DO95025 AL157687.1-201ENST00000554853 619 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 AC092807.2-201ENST00000609367 243 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 AC005562.2-201ENST00000618264 111 ntBASIC1.13□□□□□ -2.23
SEMA3DO95025 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SEMA3DO95025 RNU6-1019P-201ENST00000364424 107 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 RNU6-360P-201ENST00000390944 104 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
SEMA3DO95025 MIR1283-1-201ENST00000408494 87 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 AC004866.1-201ENST00000411748 78 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 RPL23AP36-201ENST00000413895 458 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 MTCO1P21-201ENST00000416634 589 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 BTF3P4-201ENST00000418852 495 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.12□□□□□ -2.23
SEMA3DO95025 RNU6-261P-201ENST00000459506 102 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 AC083798.1-201ENST00000472671 131 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 AC067942.3-201ENST00000512025 362 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 AC011406.1-201ENST00000512440 370 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 SNORA19.2-201ENST00000516013 114 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 SNORD60.2-201ENST00000516883 86 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.12□□□□□ -2.23
SEMA3DO95025 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.12□□□□□ -2.23
SEMA3DO95025 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.12□□□□□ -2.23
SEMA3DO95025 SCOCP1-201ENST00000554676 349 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 MIR5006-201ENST00000583027 110 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 AC022079.1-201ENST00000621546 602 ntBASIC1.12□□□□□ -2.23
SEMA3DO95025 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.12□□□□□ -2.23
SEMA3DO95025 ICE2P2-201ENST00000483823 2787 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 MIR302D-201ENST00000362275 68 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 Y_RNA.167-201ENST00000363735 109 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 SNORD1A-201ENST00000364968 72 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 Y_RNA.338-201ENST00000365320 114 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 RNU6-1286P-201ENST00000383871 107 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 SNORA70.7-201ENST00000384159 133 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 MIR300-201ENST00000401138 83 ntBASIC1.11□□□□□ -2.23
SEMA3DO95025 FGF7P8-201ENST00000402994 292 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 276.5 ms