Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF40O75150 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF40O75150 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.57□□□□□ -1.68
RNF40O75150 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF40O75150 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF40O75150 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF40O75150 AC006971.1-201ENST00000407916 4486 ntBASIC4.56□□□□□ -1.68
RNF40O75150 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF40O75150 AL353746.1-201ENST00000566293 6881 ntBASIC4.56□□□□□ -1.68
RNF40O75150 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RNF40O75150 RNY1P10-201ENST00000363268 113 ntBASIC4.56□□□□□ -1.68
RNF40O75150 SNORD32B-201ENST00000364460 84 ntBASIC4.56□□□□□ -1.68
RNF40O75150 Y_RNA.342-201ENST00000365352 113 ntBASIC4.56□□□□□ -1.68
RNF40O75150 RNU1-13P-201ENST00000384499 162 ntBASIC4.56□□□□□ -1.68
RNF40O75150 MIR23B-201ENST00000384832 97 ntBASIC4.56□□□□□ -1.68
RNF40O75150 RNA5SP317-201ENST00000410176 116 ntBASIC4.56□□□□□ -1.68
RNF40O75150 RNA5SP225-201ENST00000410874 135 ntBASIC4.56□□□□□ -1.68
RNF40O75150 RNA5SP311-201ENST00000411290 116 ntBASIC4.56□□□□□ -1.68
RNF40O75150 YME1L1P1-201ENST00000429435 297 ntBASIC4.56□□□□□ -1.68
RNF40O75150 AC018634.1-201ENST00000437554 401 ntBASIC4.56□□□□□ -1.68
RNF40O75150 AC008155.2-201ENST00000464337 397 ntBASIC4.56□□□□□ -1.68
RNF40O75150 RNA5SP315-201ENST00000516340 116 ntBASIC4.56□□□□□ -1.68
RNF40O75150 RNA5SP312-201ENST00000517068 116 ntBASIC4.56□□□□□ -1.68
RNF40O75150 HSPE1P18-201ENST00000517602 280 ntBASIC4.56□□□□□ -1.68
RNF40O75150 MIR5009-201ENST00000578736 100 ntBASIC4.56□□□□□ -1.68
RNF40O75150 MIR3129-201ENST00000581095 76 ntBASIC4.56□□□□□ -1.68
RNF40O75150 MIR2681-201ENST00000581814 105 ntBASIC4.56□□□□□ -1.68
RNF40O75150 AC020914.4-201ENST00000597690 277 ntBASIC4.56□□□□□ -1.68
RNF40O75150 AC002064.3-201ENST00000623448 346 ntBASIC4.56□□□□□ -1.68
RNF40O75150 RNA5SP196-201ENST00000625967 102 ntBASIC4.56□□□□□ -1.68
RNF40O75150 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF40O75150 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF40O75150 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF40O75150 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
RNF40O75150 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
RNF40O75150 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
RNF40O75150 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF40O75150 FAM35DP-201ENST00000323387 2712 ntBASIC4.55□□□□□ -1.68
RNF40O75150 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RNF40O75150 MIR383-201ENST00000362257 73 ntBASIC4.55□□□□□ -1.68
RNF40O75150 RNU6-655P-201ENST00000362858 107 ntBASIC4.55□□□□□ -1.68
RNF40O75150 RNU1-132P-201ENST00000364300 164 ntBASIC4.55□□□□□ -1.68
RNF40O75150 RNU6-1292P-201ENST00000383856 107 ntBASIC4.55□□□□□ -1.68
RNF40O75150 RNU6-904P-201ENST00000516206 101 ntBASIC4.55□□□□□ -1.68
RNF40O75150 RNU6-1098P-201ENST00000516772 96 ntBASIC4.55□□□□□ -1.68
RNF40O75150 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.55□□□□□ -1.68
RNF40O75150 AC113403.1-201ENST00000604910 193 ntBASIC4.55□□□□□ -1.68
RNF40O75150 AC107294.3-201ENST00000609211 526 ntBASIC4.55□□□□□ -1.68
RNF40O75150 FAM27D1-201ENST00000612308 341 ntBASIC4.55□□□□□ -1.68
RNF40O75150 Pinc.1-201ENST00000616452 154 ntBASIC4.55□□□□□ -1.68
RNF40O75150 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.55□□□□□ -1.68
RNF40O75150 MIR2052-201ENST00000636055 55 ntBASIC4.55□□□□□ -1.68
RNF40O75150 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF40O75150 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF40O75150 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF40O75150 PWAR6-201ENST00000552334 4618 ntBASIC4.55□□□□□ -1.68
RNF40O75150 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RNF40O75150 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF40O75150 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF40O75150 CPHL1P-201ENST00000461341 3407 ntBASIC4.54□□□□□ -1.68
RNF40O75150 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RNF40O75150 RNU6-1209P-201ENST00000363655 107 ntBASIC4.54□□□□□ -1.68
RNF40O75150 MIR607-201ENST00000385241 96 ntBASIC4.54□□□□□ -1.68
RNF40O75150 MIR1911-201ENST00000410783 80 ntBASIC4.54□□□□□ -1.68
RNF40O75150 AC007064.1-201ENST00000412238 351 ntBASIC4.54□□□□□ -1.68
RNF40O75150 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF40O75150 RNU7-57P-201ENST00000459540 60 ntBASIC4.54□□□□□ -1.68
RNF40O75150 RPL21P129-201ENST00000491732 478 ntBASIC4.54□□□□□ -1.68
RNF40O75150 OR9P1P-201ENST00000496431 281 ntBASIC4.54□□□□□ -1.68
RNF40O75150 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF40O75150 SCARNA15-202ENST00000516881 127 ntBASIC4.54□□□□□ -1.68
RNF40O75150 MIR492-201ENST00000638676 116 ntBASIC4.54□□□□□ -1.68
RNF40O75150 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF40O75150 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RNF40O75150 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RNF40O75150 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF40O75150 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF40O75150 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF40O75150 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RNF40O75150 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RNF40O75150 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF40O75150 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF40O75150 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RNF40O75150 SPRR2C-201ENST00000290702 219 ntBASIC4.53□□□□□ -1.68
RNF40O75150 MIR331-201ENST00000362302 94 ntBASIC4.53□□□□□ -1.68
RNF40O75150 snoU2_19.1-201ENST00000362361 80 ntBASIC4.53□□□□□ -1.68
RNF40O75150 Y_RNA.198-201ENST00000364013 98 ntBASIC4.53□□□□□ -1.68
RNF40O75150 MIR181B1-201ENST00000385240 110 ntBASIC4.53□□□□□ -1.68
RNF40O75150 MIR1283-1-201ENST00000408494 87 ntBASIC4.53□□□□□ -1.68
RNF40O75150 Y_RNA.593-201ENST00000410292 98 ntBASIC4.53□□□□□ -1.68
RNF40O75150 AC063976.3-201ENST00000426849 329 ntBASIC4.53□□□□□ -1.68
RNF40O75150 AC023449.1-201ENST00000454464 154 ntBASIC4.53□□□□□ -1.68
RNF40O75150 AC026421.1-201ENST00000519101 163 ntBASIC4.53□□□□□ -1.68
RNF40O75150 TRAV8-5-201ENST00000537369 341 ntBASIC4.53□□□□□ -1.68
RNF40O75150 AC034105.4-201ENST00000568304 277 ntBASIC4.53□□□□□ -1.68
RNF40O75150 uc_338.13-201ENST00000618243 179 ntBASIC4.53□□□□□ -1.68
RNF40O75150 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF40O75150 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
RNF40O75150 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
RNF40O75150 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms