Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNX2O60749 SNORD115-8-201ENST00000363856 82 ntBASIC2.73□□□□□ -1.97
SNX2O60749 SNORD115-38-201ENST00000365037 82 ntBASIC2.73□□□□□ -1.97
SNX2O60749 SNORD14.1-201ENST00000365609 90 ntBASIC2.73□□□□□ -1.97
SNX2O60749 Y_RNA.424-201ENST00000384063 103 ntBASIC2.73□□□□□ -1.97
SNX2O60749 Y_RNA.459-201ENST00000384251 102 ntBASIC2.73□□□□□ -1.97
SNX2O60749 Y_RNA.510-201ENST00000384511 114 ntBASIC2.73□□□□□ -1.97
SNX2O60749 MIR628-201ENST00000385229 95 ntBASIC2.73□□□□□ -1.97
SNX2O60749 RNU1-139P-201ENST00000391307 165 ntBASIC2.73□□□□□ -1.97
SNX2O60749 AL138827.1-201ENST00000402666 306 ntBASIC2.73□□□□□ -1.97
SNX2O60749 HMGB3P2-201ENST00000411913 584 ntBASIC2.73□□□□□ -1.97
SNX2O60749 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.73□□□□□ -1.97
SNX2O60749 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.73□□□□□ -1.97
SNX2O60749 U8.20-201ENST00000459445 131 ntBASIC2.73□□□□□ -1.97
SNX2O60749 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.73□□□□□ -1.97
SNX2O60749 RNU6-1114P-201ENST00000516022 107 ntBASIC2.73□□□□□ -1.97
SNX2O60749 CYCSP26-201ENST00000534107 320 ntBASIC2.73□□□□□ -1.97
SNX2O60749 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.73□□□□□ -1.97
SNX2O60749 MIR5695-201ENST00000579717 85 ntBASIC2.73□□□□□ -1.97
SNX2O60749 AC136443.5-201ENST00000603741 370 ntBASIC2.73□□□□□ -1.97
SNX2O60749 AC124312.5-201ENST00000604451 268 ntBASIC2.73□□□□□ -1.97
SNX2O60749 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNX2O60749 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.73□□□□□ -1.97
SNX2O60749 ZNF204P-201ENST00000416749 2397 ntBASIC2.73□□□□□ -1.97
SNX2O60749 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNX2O60749 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SNX2O60749 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SNX2O60749 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.72□□□□□ -1.97
SNX2O60749 Y_RNA.153-201ENST00000363615 91 ntBASIC2.72□□□□□ -1.97
SNX2O60749 RNU6-26P-201ENST00000383985 107 ntBASIC2.72□□□□□ -1.97
SNX2O60749 RNU6-318P-201ENST00000384283 103 ntBASIC2.72□□□□□ -1.97
SNX2O60749 RNU1-148P-201ENST00000384472 162 ntBASIC2.72□□□□□ -1.97
SNX2O60749 RNU6-1274P-201ENST00000384557 107 ntBASIC2.72□□□□□ -1.97
SNX2O60749 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.72□□□□□ -1.97
SNX2O60749 AC007215.1-201ENST00000464893 276 ntBASIC2.72□□□□□ -1.97
SNX2O60749 MTATP8P1-201ENST00000467115 207 ntBASIC2.72□□□□□ -1.97
SNX2O60749 RN7SL297P-201ENST00000483161 293 ntBASIC2.72□□□□□ -1.97
SNX2O60749 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.72□□□□□ -1.97
SNX2O60749 AC010469.2-201ENST00000496412 480 ntBASIC2.72□□□□□ -1.97
SNX2O60749 RNU6-911P-201ENST00000516523 104 ntBASIC2.72□□□□□ -1.97
SNX2O60749 DEFB131C-201ENST00000528817 165 ntBASIC2.72□□□□□ -1.97
SNX2O60749 EIF4A1P12-201ENST00000551910 141 ntBASIC2.72□□□□□ -1.97
SNX2O60749 AL442163.3-201ENST00000554110 156 ntBASIC2.72□□□□□ -1.97
SNX2O60749 AC009127.3-201ENST00000570531 403 ntBASIC2.72□□□□□ -1.97
SNX2O60749 MIR4319-201ENST00000577285 85 ntBASIC2.72□□□□□ -1.97
SNX2O60749 MIR3670-2-201ENST00000582974 65 ntBASIC2.72□□□□□ -1.97
SNX2O60749 MIR3670-1-201ENST00000584160 65 ntBASIC2.72□□□□□ -1.97
SNX2O60749 MIR3670-3-201ENST00000584855 65 ntBASIC2.72□□□□□ -1.97
SNX2O60749 AC125232.2-201ENST00000592457 143 ntBASIC2.72□□□□□ -1.97
SNX2O60749 MIR3670-4-201ENST00000612260 65 ntBASIC2.72□□□□□ -1.97
SNX2O60749 AC005296.1-201ENST00000616145 209 ntBASIC2.72□□□□□ -1.97
SNX2O60749 AL078596.1-201ENST00000624856 447 ntBASIC2.72□□□□□ -1.97
SNX2O60749 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.72□□□□□ -1.97
SNX2O60749 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.71□□□□□ -1.97
SNX2O60749 AP006437.1-201ENST00000641440 3685 ntBASIC2.71□□□□□ -1.98
SNX2O60749 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.71□□□□□ -1.98
SNX2O60749 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.71□□□□□ -1.98
SNX2O60749 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SNX2O60749 RNA5SP361-201ENST00000362686 118 ntBASIC2.71□□□□□ -1.98
SNX2O60749 RNU6-873P-201ENST00000363833 107 ntBASIC2.71□□□□□ -1.98
SNX2O60749 RNU1-112P-201ENST00000364401 164 ntBASIC2.71□□□□□ -1.98
SNX2O60749 RNU6-281P-201ENST00000384212 103 ntBASIC2.71□□□□□ -1.98
SNX2O60749 MIR29B2-201ENST00000385055 81 ntBASIC2.71□□□□□ -1.98
SNX2O60749 AL356057.3-201ENST00000402607 340 ntBASIC2.71□□□□□ -1.98
SNX2O60749 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX2O60749 AC096638.1-201ENST00000444678 216 ntBASIC2.71□□□□□ -1.98
SNX2O60749 SNORD109B-201ENST00000458961 67 ntBASIC2.71□□□□□ -1.98
SNX2O60749 SNORD109A-201ENST00000459128 67 ntBASIC2.71□□□□□ -1.98
SNX2O60749 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.71□□□□□ -1.98
SNX2O60749 HSPE1P18-201ENST00000517602 280 ntBASIC2.71□□□□□ -1.98
SNX2O60749 AP002770.2-201ENST00000543613 532 ntBASIC2.71□□□□□ -1.98
SNX2O60749 SNORD14A-201ENST00000606526 91 ntBASIC2.71□□□□□ -1.98
SNX2O60749 AL138825.1-201ENST00000618587 192 ntBASIC2.71□□□□□ -1.98
SNX2O60749 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.71□□□□□ -1.98
SNX2O60749 AC243829.7-201ENST00000633081 225 ntBASIC2.71□□□□□ -1.98
SNX2O60749 RNU6-1301P-201ENST00000362724 104 ntBASIC2.7□□□□□ -1.98
SNX2O60749 RNU6-137P-201ENST00000363680 108 ntBASIC2.7□□□□□ -1.98
SNX2O60749 U3.9-201ENST00000363823 204 ntBASIC2.7□□□□□ -1.98
SNX2O60749 RNU6-944P-201ENST00000364023 107 ntBASIC2.7□□□□□ -1.98
SNX2O60749 RNU6-879P-201ENST00000364328 108 ntBASIC2.7□□□□□ -1.98
SNX2O60749 RNU1-91P-201ENST00000364746 163 ntBASIC2.7□□□□□ -1.98
SNX2O60749 SNORA51.11-201ENST00000384442 131 ntBASIC2.7□□□□□ -1.98
SNX2O60749 RNU6-101P-201ENST00000410323 104 ntBASIC2.7□□□□□ -1.98
SNX2O60749 Y_RNA.597-201ENST00000410463 100 ntBASIC2.7□□□□□ -1.98
SNX2O60749 RNU2-52P-201ENST00000410680 190 ntBASIC2.7□□□□□ -1.98
SNX2O60749 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.7□□□□□ -1.98
SNX2O60749 MTCO3P8-201ENST00000453691 755 ntBASIC2.7□□□□□ -1.98
SNX2O60749 MTND5P22-201ENST00000458380 195 ntBASIC2.7□□□□□ -1.98
SNX2O60749 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.7□□□□□ -1.98
SNX2O60749 Y_RNA.721-201ENST00000517207 102 ntBASIC2.7□□□□□ -1.98
SNX2O60749 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.7□□□□□ -1.98
SNX2O60749 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.7□□□□□ -1.98
SNX2O60749 MIR3126-201ENST00000577443 74 ntBASIC2.7□□□□□ -1.98
SNX2O60749 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.7□□□□□ -1.98
SNX2O60749 AC006023.1-201ENST00000603944 259 ntBASIC2.7□□□□□ -1.98
SNX2O60749 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
SNX2O60749 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SNX2O60749 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
SNX2O60749 SNORD32B-201ENST00000364460 84 ntBASIC2.69□□□□□ -1.98
SNX2O60749 MIR196B-201ENST00000384852 84 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms