Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GRIN3BO60391 AC017071.1-201ENST00000564407 2204 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
GRIN3BO60391 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
GRIN3BO60391 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.81□□□□□ -1.8
GRIN3BO60391 RNU6-215P-201ENST00000365169 102 ntBASIC3.81□□□□□ -1.8
GRIN3BO60391 Y_RNA.383-201ENST00000383855 97 ntBASIC3.81□□□□□ -1.8
GRIN3BO60391 Y_RNA.398-201ENST00000383952 99 ntBASIC3.81□□□□□ -1.8
GRIN3BO60391 RNU6-482P-201ENST00000391068 107 ntBASIC3.81□□□□□ -1.8
GRIN3BO60391 RNU4-30P-201ENST00000410245 143 ntBASIC3.81□□□□□ -1.8
GRIN3BO60391 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.81□□□□□ -1.8
GRIN3BO60391 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.81□□□□□ -1.8
GRIN3BO60391 AC091021.1-201ENST00000468051 388 ntBASIC3.81□□□□□ -1.8
GRIN3BO60391 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.81□□□□□ -1.8
GRIN3BO60391 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.81□□□□□ -1.8
GRIN3BO60391 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.81□□□□□ -1.8
GRIN3BO60391 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.81□□□□□ -1.8
GRIN3BO60391 DEFB122-202ENST00000569013 197 ntBASIC3.81□□□□□ -1.8
GRIN3BO60391 SNORD53-201ENST00000579969 78 ntBASIC3.81□□□□□ -1.8
GRIN3BO60391 AC068831.7-201ENST00000616954 363 ntBASIC3.81□□□□□ -1.8
GRIN3BO60391 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
GRIN3BO60391 AC091152.2-201ENST00000591628 2569 ntBASIC3.81□□□□□ -1.8
GRIN3BO60391 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
GRIN3BO60391 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GRIN3BO60391 AC010889.1-201ENST00000566193 2666 ntBASIC3.8□□□□□ -1.8
GRIN3BO60391 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GRIN3BO60391 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.8□□□□□ -1.8
GRIN3BO60391 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
GRIN3BO60391 RNU6-1168P-201ENST00000390831 104 ntBASIC3.8□□□□□ -1.8
GRIN3BO60391 RNU6-1154P-201ENST00000391001 104 ntBASIC3.8□□□□□ -1.8
GRIN3BO60391 Z98941.1-201ENST00000407764 100 ntBASIC3.8□□□□□ -1.8
GRIN3BO60391 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.8□□□□□ -1.8
GRIN3BO60391 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.8□□□□□ -1.8
GRIN3BO60391 SCGB1D5P-201ENST00000515134 247 ntBASIC3.8□□□□□ -1.8
GRIN3BO60391 AC079600.2-201ENST00000550076 130 ntBASIC3.8□□□□□ -1.8
GRIN3BO60391 AC015712.3-201ENST00000559380 164 ntBASIC3.8□□□□□ -1.8
GRIN3BO60391 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.8□□□□□ -1.8
GRIN3BO60391 AC011921.3-201ENST00000605540 361 ntBASIC3.8□□□□□ -1.8
GRIN3BO60391 uc_338.25-201ENST00000613756 156 ntBASIC3.8□□□□□ -1.8
GRIN3BO60391 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.8□□□□□ -1.8
GRIN3BO60391 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.8□□□□□ -1.8
GRIN3BO60391 AC006111.3-201ENST00000622137 383 ntBASIC3.8□□□□□ -1.8
GRIN3BO60391 U6.98-201ENST00000637157 84 ntBASIC3.8□□□□□ -1.8
GRIN3BO60391 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
GRIN3BO60391 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.8□□□□□ -1.8
GRIN3BO60391 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GRIN3BO60391 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
GRIN3BO60391 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
GRIN3BO60391 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.79□□□□□ -1.8
GRIN3BO60391 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.79□□□□□ -1.8
GRIN3BO60391 Y_RNA.8-201ENST00000362353 102 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 RNU6-1298P-201ENST00000362456 101 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 Y_RNA.136-201ENST00000363444 102 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 RNU6-799P-201ENST00000363567 107 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 RNU6-1175P-201ENST00000365200 107 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 RNU6-44P-201ENST00000384045 107 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 RNU6-750P-201ENST00000390946 107 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 RNU2-49P-201ENST00000410666 184 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.79□□□□□ -1.8
GRIN3BO60391 AC126124.2-201ENST00000413542 321 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.79□□□□□ -1.8
GRIN3BO60391 AC087499.2-201ENST00000432861 149 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 COX6CP14-201ENST00000469580 174 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 RNU5F-2P-201ENST00000516066 82 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 RNU6-991P-201ENST00000516168 107 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 RNU6-313P-201ENST00000516317 112 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.79□□□□□ -1.8
GRIN3BO60391 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.79□□□□□ -1.8
GRIN3BO60391 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.79□□□□□ -1.8
GRIN3BO60391 AC005176.2-201ENST00000596933 147 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 AL357075.2-201ENST00000614906 189 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 AP001486.2-201ENST00000561652 5113 ntBASIC3.79□□□□□ -1.8
GRIN3BO60391 ZNF204P-201ENST00000416749 2397 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
GRIN3BO60391 UBE2WP1-201ENST00000362030 340 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 MIR423-201ENST00000362201 94 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 Y_RNA.179-201ENST00000363844 90 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 AL138878.1-201ENST00000405131 347 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 MIR320B2-201ENST00000408479 138 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 RNU6-1135P-201ENST00000411083 103 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 Y_RNA.626-201ENST00000411288 95 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 RPL23AP36-201ENST00000413895 458 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.78□□□□□ -1.8
GRIN3BO60391 HMGN2P20-201ENST00000437531 273 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.78□□□□□ -1.8
GRIN3BO60391 SNORD109B-201ENST00000458961 67 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 SNORD109A-201ENST00000459128 67 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.78□□□□□ -1.8
GRIN3BO60391 MIR5047-201ENST00000579212 100 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 MIR3923-201ENST00000579521 83 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.78□□□□□ -1.8
GRIN3BO60391 AL162424.1-201ENST00000602325 221 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 AL391813.1-201ENST00000603098 260 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 AL034555.1-201ENST00000604816 211 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 AC104465.1-201ENST00000611365 139 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 MIR7111-201ENST00000619751 72 ntBASIC3.78□□□□□ -1.8
GRIN3BO60391 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.78□□□□□ -1.8
GRIN3BO60391 MTND5P35-201ENST00000557537 1720 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms