Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.66□□□□□ -1.82
SMARCA5O60264 AC140059.1-201ENST00000489238 361 ntBASIC3.66□□□□□ -1.82
SMARCA5O60264 RPL23AP75-201ENST00000491601 451 ntBASIC3.66□□□□□ -1.82
SMARCA5O60264 CKS1BP2-201ENST00000497342 240 ntBASIC3.66□□□□□ -1.82
SMARCA5O60264 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.66□□□□□ -1.82
SMARCA5O60264 AC074198.2-201ENST00000508153 258 ntBASIC3.66□□□□□ -1.82
SMARCA5O60264 AC091874.1-201ENST00000511402 339 ntBASIC3.66□□□□□ -1.82
SMARCA5O60264 RNU6-567P-201ENST00000516746 107 ntBASIC3.66□□□□□ -1.82
SMARCA5O60264 MIR2355-201ENST00000517199 87 ntBASIC3.66□□□□□ -1.82
SMARCA5O60264 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.66□□□□□ -1.82
SMARCA5O60264 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.66□□□□□ -1.82
SMARCA5O60264 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.66□□□□□ -1.82
SMARCA5O60264 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SMARCA5O60264 AC009541.1-201ENST00000438279 2662 ntBASIC3.65□□□□□ -1.82
SMARCA5O60264 Y_RNA.40-201ENST00000362645 93 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 RNU6-682P-201ENST00000363843 106 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 RNU6-290P-201ENST00000365212 101 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SMARCA5O60264 SNORD78.2-201ENST00000391076 69 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 SNORA26.3-201ENST00000391119 136 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 RNA5SP274-201ENST00000410484 108 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 RNU6-651P-201ENST00000411040 105 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.65□□□□□ -1.83
SMARCA5O60264 RNU7-120P-201ENST00000459334 63 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 RNU6-1212P-201ENST00000517023 104 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 AC087441.2-201ENST00000529141 262 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 AC024405.2-202ENST00000532731 184 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 AC021231.3-201ENST00000558497 370 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.65□□□□□ -1.83
SMARCA5O60264 MIR3200-201ENST00000580767 85 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 AL161756.2-201ENST00000604597 246 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 AC233981.2-201ENST00000611524 1614 ntBASIC3.65□□□□□ -1.83
SMARCA5O60264 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMARCA5O60264 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMARCA5O60264 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SMARCA5O60264 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMARCA5O60264 RNU6-17P-201ENST00000384245 107 ntBASIC3.64□□□□□ -1.83
SMARCA5O60264 Y_RNA.506-201ENST00000384494 102 ntBASIC3.64□□□□□ -1.83
SMARCA5O60264 RNU6-18P-201ENST00000384527 107 ntBASIC3.64□□□□□ -1.83
SMARCA5O60264 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SMARCA5O60264 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.64□□□□□ -1.83
SMARCA5O60264 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.64□□□□□ -1.83
SMARCA5O60264 RN7SKP43-201ENST00000516173 320 ntBASIC3.64□□□□□ -1.83
SMARCA5O60264 AC022559.1-201ENST00000520905 205 ntBASIC3.64□□□□□ -1.83
SMARCA5O60264 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.64□□□□□ -1.83
SMARCA5O60264 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SMARCA5O60264 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.63□□□□□ -1.83
SMARCA5O60264 AL353743.1-202ENST00000431724 1695 ntBASIC3.63□□□□□ -1.83
SMARCA5O60264 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMARCA5O60264 RNU4-9P-201ENST00000364951 139 ntBASIC3.63□□□□□ -1.83
SMARCA5O60264 RNA5SP213-201ENST00000391031 106 ntBASIC3.63□□□□□ -1.83
SMARCA5O60264 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.63□□□□□ -1.83
SMARCA5O60264 COX6CP10-201ENST00000416832 224 ntBASIC3.63□□□□□ -1.83
SMARCA5O60264 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.63□□□□□ -1.83
SMARCA5O60264 EIF1P2-201ENST00000428233 350 ntBASIC3.63□□□□□ -1.83
SMARCA5O60264 AL161788.1-201ENST00000441805 169 ntBASIC3.63□□□□□ -1.83
SMARCA5O60264 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.63□□□□□ -1.83
SMARCA5O60264 RPS3P1-201ENST00000456781 192 ntBASIC3.63□□□□□ -1.83
SMARCA5O60264 SNRPGP7-201ENST00000469016 106 ntBASIC3.63□□□□□ -1.83
SMARCA5O60264 AP000870.1-201ENST00000472927 406 ntBASIC3.63□□□□□ -1.83
SMARCA5O60264 RPS29P26-201ENST00000477483 171 ntBASIC3.63□□□□□ -1.83
SMARCA5O60264 AP002392.1-201ENST00000537692 208 ntBASIC3.63□□□□□ -1.83
SMARCA5O60264 RPL23AP88-201ENST00000605759 454 ntBASIC3.63□□□□□ -1.83
SMARCA5O60264 SCARNA4-201ENST00000629045 128 ntBASIC3.63□□□□□ -1.83
SMARCA5O60264 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.63□□□□□ -1.83
SMARCA5O60264 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.62□□□□□ -1.83
SMARCA5O60264 RNA5SP361-201ENST00000362686 118 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 RNU6-1159P-201ENST00000362933 107 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 RNU1-72P-201ENST00000362976 153 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 RNU6-47P-201ENST00000383866 107 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 RNU6-968P-201ENST00000384076 107 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 MIR32-201ENST00000384965 70 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 MIR95-201ENST00000385072 81 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 SNORA48.2-201ENST00000390926 124 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 RNU4-30P-201ENST00000410245 143 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 Y_RNA.626-201ENST00000411288 95 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.62□□□□□ -1.83
SMARCA5O60264 AL445305.1-201ENST00000432577 575 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 AC005002.2-201ENST00000438228 269 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 AC016700.2-201ENST00000446011 156 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 AF186996.7-201ENST00000492781 209 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCA5O60264 RNU5F-2P-201ENST00000516066 82 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 SNORD116-28-201ENST00000516123 91 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 RNU6-861P-201ENST00000516745 106 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 Y_RNA.703-201ENST00000516846 111 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 RNA5SP380-201ENST00000517190 98 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.62□□□□□ -1.83
SMARCA5O60264 AL713866.2-201ENST00000603579 219 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 AL034555.1-201ENST00000604816 211 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 AL138963.2-201ENST00000605137 226 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 AL359198.2-201ENST00000611836 194 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 AL162274.2-201ENST00000614406 332 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 SNORD98-201ENST00000636377 67 ntBASIC3.62□□□□□ -1.83
SMARCA5O60264 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMARCA5O60264 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMARCA5O60264 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMARCA5O60264 RNU4-90P-201ENST00000362773 141 ntBASIC3.61□□□□□ -1.83
SMARCA5O60264 MIR128-1-201ENST00000384921 82 ntBASIC3.61□□□□□ -1.83
SMARCA5O60264 MIR487A-201ENST00000385009 80 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms