Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 RAB28P5-201ENST00000427490 651 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.81□□□□□ -2.28
KDELR3O43731 RPL31P35-201ENST00000431058 377 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 AC009961.2-201ENST00000435771 251 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 MTCO2P3-201ENST00000442543 421 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.81□□□□□ -2.28
KDELR3O43731 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 SCARNA1-201ENST00000517138 166 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 RNU6-165P-201ENST00000517170 99 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.81□□□□□ -2.28
KDELR3O43731 AC146944.4-201ENST00000602697 718 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 AC245014.2-201ENST00000603689 287 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.81□□□□□ -2.28
KDELR3O43731 AC246785.4-201ENST00000605374 287 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 RNU6-85P-201ENST00000605989 107 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 AL020996.3-201ENST00000606617 222 ntBASIC0.81□□□□□ -2.28
KDELR3O43731 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.81□□□□□ -2.28
KDELR3O43731 SNORA33-201ENST00000363664 130 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 SNORD114-24-201ENST00000365029 72 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 RNU6-1031P-201ENST00000384773 107 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 SNORD12-201ENST00000391002 90 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 RNU2-29P-201ENST00000410423 189 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 RNU6-195P-201ENST00000411352 109 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 RPS26P42-201ENST00000413485 326 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 AC063976.4-201ENST00000421971 163 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.8□□□□□ -2.28
KDELR3O43731 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.8□□□□□ -2.28
KDELR3O43731 AC004386.2-201ENST00000441858 148 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 AC009237.7-201ENST00000447357 229 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 AC016717.1-201ENST00000448918 286 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.8□□□□□ -2.28
KDELR3O43731 snoU13.6-201ENST00000458785 104 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 RNU7-167P-201ENST00000459160 62 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 SRRM1P2-201ENST00000464531 1192 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 RPS29P1-201ENST00000465274 159 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 AC005178.1-201ENST00000508392 440 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 SNORA31.2-201ENST00000516019 134 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.8□□□□□ -2.28
KDELR3O43731 AGGF1P4-201ENST00000568249 801 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 MIR4742-201ENST00000581069 85 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 MTATP6P3-201ENST00000581686 676 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 MIR548AB-201ENST00000584917 84 ntBASIC0.8□□□□□ -2.28
KDELR3O43731 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.8□□□□□ -2.28
KDELR3O43731 AC018630.2-201ENST00000534866 2403 ntBASIC0.79□□□□□ -2.28
KDELR3O43731 RNU4-79P-201ENST00000362764 141 ntBASIC0.79□□□□□ -2.28
KDELR3O43731 RNU6-910P-201ENST00000390844 107 ntBASIC0.79□□□□□ -2.28
KDELR3O43731 RNA5SP109-201ENST00000391010 116 ntBASIC0.79□□□□□ -2.28
KDELR3O43731 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
KDELR3O43731 MIR1287-201ENST00000408492 90 ntBASIC0.79□□□□□ -2.28
KDELR3O43731 PIGFP2-201ENST00000421400 651 ntBASIC0.79□□□□□ -2.28
KDELR3O43731 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
KDELR3O43731 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.79□□□□□ -2.28
KDELR3O43731 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.79□□□□□ -2.28
KDELR3O43731 AL033528.1-201ENST00000453780 140 ntBASIC0.79□□□□□ -2.28
KDELR3O43731 TRBVA-201ENST00000498804 316 ntBASIC0.79□□□□□ -2.28
KDELR3O43731 MTND3P3-201ENST00000505004 126 ntBASIC0.79□□□□□ -2.28
KDELR3O43731 RNU1-142P-201ENST00000516682 145 ntBASIC0.79□□□□□ -2.28
KDELR3O43731 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.79□□□□□ -2.28
KDELR3O43731 AC108706.1-201ENST00000611053 297 ntBASIC0.79□□□□□ -2.28
KDELR3O43731 AC068792.1-201ENST00000621354 417 ntBASIC0.79□□□□□ -2.28
KDELR3O43731 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
KDELR3O43731 AC027514.1-201ENST00000588561 1603 ntBASIC0.78□□□□□ -2.28
KDELR3O43731 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
KDELR3O43731 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
KDELR3O43731 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
KDELR3O43731 RNU6-456P-201ENST00000384493 107 ntBASIC0.78□□□□□ -2.28
KDELR3O43731 RNU6-606P-201ENST00000384721 111 ntBASIC0.78□□□□□ -2.28
KDELR3O43731 MIR200A-201ENST00000384875 90 ntBASIC0.78□□□□□ -2.28
KDELR3O43731 MIR320B2-201ENST00000408479 138 ntBASIC0.78□□□□□ -2.28
KDELR3O43731 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.78□□□□□ -2.28
KDELR3O43731 AC008134.1-201ENST00000420943 193 ntBASIC0.78□□□□□ -2.28
KDELR3O43731 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.78□□□□□ -2.28
KDELR3O43731 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.78□□□□□ -2.28
KDELR3O43731 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.78□□□□□ -2.28
KDELR3O43731 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.78□□□□□ -2.28
KDELR3O43731 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
KDELR3O43731 AC010493.1-201ENST00000513479 292 ntBASIC0.78□□□□□ -2.28
KDELR3O43731 AC105417.1-201ENST00000514691 285 ntBASIC0.78□□□□□ -2.28
KDELR3O43731 AC008088.1-201ENST00000580993 280 ntBASIC0.78□□□□□ -2.28
KDELR3O43731 AL513534.2-201ENST00000603836 250 ntBASIC0.78□□□□□ -2.28
KDELR3O43731 AC016727.2-201ENST00000603988 621 ntBASIC0.78□□□□□ -2.28
KDELR3O43731 MTND4P5-201ENST00000435821 1374 ntBASIC0.78□□□□□ -2.28
KDELR3O43731 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
KDELR3O43731 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
KDELR3O43731 RNU6-227P-201ENST00000362865 103 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 MIR586-201ENST00000385035 97 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 SNORA40.3-201ENST00000390964 122 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 RNA5SP247-201ENST00000411181 105 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 RNU6-57P-201ENST00000411348 103 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.77□□□□□ -2.29
KDELR3O43731 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.77□□□□□ -2.29
KDELR3O43731 SNRPFP3-201ENST00000457792 225 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 AC103851.1-201ENST00000506833 274 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 RNU6-612P-201ENST00000516909 102 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 AC106038.2-201ENST00000520706 568 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 AC025423.5-201ENST00000550230 219 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 CYP3A137P-201ENST00000562436 69 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 AC068790.6-201ENST00000602558 258 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms