Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 NACAP3-201ENST00000552100 481 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 AC055872.1-201ENST00000570978 278 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 MIR3690-201ENST00000580266 75 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 AC004832.4-201ENST00000608952 331 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 U6.106-201ENST00000636360 105 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SRGAP3O43295 BX322639.1-202ENST00000423987 2213 ntBASIC3.52□□□□□ -1.85
SRGAP3O43295 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SRGAP3O43295 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.51□□□□□ -1.85
SRGAP3O43295 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SRGAP3O43295 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.51□□□□□ -1.85
SRGAP3O43295 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SRGAP3O43295 SNORA31-201ENST00000362607 130 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 Y_RNA.291-201ENST00000364886 113 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 Y_RNA.304-201ENST00000365011 112 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 RN7SKP123-201ENST00000410732 291 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 AC012306.1-201ENST00000423267 114 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.51□□□□□ -1.85
SRGAP3O43295 HMGN2P10-201ENST00000448085 265 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 SNORD2.1-201ENST00000458762 69 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 RNA5SP367-201ENST00000516557 118 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 SNORA31.16-201ENST00000516773 139 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 MTND5P41-201ENST00000517498 206 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 AP004242.1-201ENST00000533701 349 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 MIR3145-201ENST00000580727 82 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 AL137843.1-201ENST00000605078 385 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 AC090115.4-201ENST00000609970 188 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 RBBP8P1-201ENST00000449447 1844 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 AC092593.1-201ENST00000515413 1815 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SRGAP3O43295 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.51□□□□□ -1.85
SRGAP3O43295 AL359854.1-201ENST00000614203 1594 ntBASIC3.51□□□□□ -1.85
SRGAP3O43295 MAPK10-362ENST00000641864 4484 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 MTND5P35-201ENST00000557537 1720 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SRGAP3O43295 RNU5F-3P-201ENST00000363767 117 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 Y_RNA.179-201ENST00000363844 90 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 Y_RNA.240-201ENST00000364469 95 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 MIR181A2-201ENST00000384863 110 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 AL451074.5-201ENST00000415894 435 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.5□□□□□ -1.85
SRGAP3O43295 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.5□□□□□ -1.85
SRGAP3O43295 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.5□□□□□ -1.85
SRGAP3O43295 AC091826.1-201ENST00000514065 313 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 ACA59.2-201ENST00000517061 156 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 AC079600.2-201ENST00000550076 130 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 AC021739.1-201ENST00000559631 174 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 AC090897.2-201ENST00000581715 130 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 AC022441.3-201ENST00000605737 136 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 XIST_intron.1-201ENST00000619444 68 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SRGAP3O43295 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SRGAP3O43295 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SRGAP3O43295 GABRG2-229ENST00000641017 3628 ntBASIC3.5□□□□□ -1.85
SRGAP3O43295 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SRGAP3O43295 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SRGAP3O43295 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.49□□□□□ -1.85
SRGAP3O43295 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SRGAP3O43295 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SRGAP3O43295 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.49□□□□□ -1.85
SRGAP3O43295 RNU4-80P-201ENST00000363200 141 ntBASIC3.49□□□□□ -1.85
SRGAP3O43295 BMS1P22-201ENST00000414726 313 ntBASIC3.49□□□□□ -1.85
SRGAP3O43295 RPS29P6-201ENST00000438196 145 ntBASIC3.49□□□□□ -1.85
SRGAP3O43295 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.49□□□□□ -1.85
SRGAP3O43295 AC006445.2-201ENST00000510061 472 ntBASIC3.49□□□□□ -1.85
SRGAP3O43295 RN7SKP132-201ENST00000516001 208 ntBASIC3.49□□□□□ -1.85
SRGAP3O43295 RNU7-200P-201ENST00000516105 62 ntBASIC3.49□□□□□ -1.85
SRGAP3O43295 RNU6-1219P-201ENST00000516143 112 ntBASIC3.49□□□□□ -1.85
SRGAP3O43295 AP005660.1-201ENST00000522972 293 ntBASIC3.49□□□□□ -1.85
SRGAP3O43295 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SRGAP3O43295 MRPS18CP4-201ENST00000535821 231 ntBASIC3.49□□□□□ -1.85
SRGAP3O43295 AC006199.1-201ENST00000548728 219 ntBASIC3.49□□□□□ -1.85
SRGAP3O43295 AC018448.1-201ENST00000552843 316 ntBASIC3.49□□□□□ -1.85
SRGAP3O43295 MIR3144-201ENST00000579460 79 ntBASIC3.49□□□□□ -1.85
SRGAP3O43295 MIR4308-201ENST00000580634 81 ntBASIC3.49□□□□□ -1.85
SRGAP3O43295 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.49□□□□□ -1.85
SRGAP3O43295 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.49□□□□□ -1.85
SRGAP3O43295 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.49□□□□□ -1.85
SRGAP3O43295 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SRGAP3O43295 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.49□□□□□ -1.85
SRGAP3O43295 AC110491.1-201ENST00000562191 2010 ntBASIC3.49□□□□□ -1.85
SRGAP3O43295 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SRGAP3O43295 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.49□□□□□ -1.85
SRGAP3O43295 AC093010.3-201ENST00000570269 15214 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 RNU6-727P-201ENST00000363592 107 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 RNU6-270P-201ENST00000364131 105 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 Y_RNA.262-201ENST00000364641 102 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 RNY1P5-201ENST00000383890 115 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 Y_RNA.498-201ENST00000384460 102 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 MIR613-201ENST00000385248 95 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.48□□□□□ -1.85
SRGAP3O43295 BPY2DP-201ENST00000422208 265 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 RAB28P5-201ENST00000427490 651 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 AC087499.2-201ENST00000432861 149 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.48□□□□□ -1.85
SRGAP3O43295 RNA5SP310-201ENST00000459084 116 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 AC090525.1-201ENST00000479116 478 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 RNU2-58P-201ENST00000516403 183 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 RNU6-966P-201ENST00000516479 104 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms