Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-679P-201ENST00000391003 106 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 RNU2-42P-201ENST00000410697 113 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 MTCO3P43-201ENST00000440974 771 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 MTCO3P10-201ENST00000455912 772 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 AC016925.1-201ENST00000458303 298 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.47□□□□□ -2.49
CHD1O14646 RNU7-140P-201ENST00000459546 60 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 AC114811.1-201ENST00000507207 168 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 RNU1-142P-201ENST00000516682 145 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.47□□□□□ -2.49
CHD1O14646 AC021231.3-201ENST00000558497 370 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 AL121992.2-201ENST00000606262 256 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 MIR8054-201ENST00000620877 86 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 AL603839.4-201ENST00000624658 1005 ntBASIC-0.47□□□□□ -2.49
CHD1O14646 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.47□□□□□ -2.49
CHD1O14646 RNU6-440P-201ENST00000390882 105 ntBASIC-0.48□□□□□ -2.49
CHD1O14646 RNA5SP467-201ENST00000391274 118 ntBASIC-0.48□□□□□ -2.49
CHD1O14646 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.48□□□□□ -2.49
CHD1O14646 AC119618.1-201ENST00000434191 222 ntBASIC-0.48□□□□□ -2.49
CHD1O14646 MTND1P31-201ENST00000449206 961 ntBASIC-0.48□□□□□ -2.49
CHD1O14646 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.48□□□□□ -2.49
CHD1O14646 AC006026.2-201ENST00000457376 180 ntBASIC-0.48□□□□□ -2.49
CHD1O14646 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
CHD1O14646 AC023827.1-201ENST00000569247 97 ntBASIC-0.48□□□□□ -2.49
CHD1O14646 MIR18A-201ENST00000362310 71 ntBASIC-0.49□□□□□ -2.49
CHD1O14646 RNU6-353P-201ENST00000364266 108 ntBASIC-0.49□□□□□ -2.49
CHD1O14646 RNU6-395P-201ENST00000365662 106 ntBASIC-0.49□□□□□ -2.49
CHD1O14646 MIR1207-201ENST00000408249 87 ntBASIC-0.49□□□□□ -2.49
CHD1O14646 RNU4-22P-201ENST00000411058 166 ntBASIC-0.49□□□□□ -2.49
CHD1O14646 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.49□□□□□ -2.49
CHD1O14646 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.49□□□□□ -2.49
CHD1O14646 AC010469.2-201ENST00000496412 480 ntBASIC-0.49□□□□□ -2.49
CHD1O14646 AC113347.3-201ENST00000509113 148 ntBASIC-0.49□□□□□ -2.49
CHD1O14646 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.49□□□□□ -2.49
CHD1O14646 AF235103.2-201ENST00000525753 346 ntBASIC-0.49□□□□□ -2.49
CHD1O14646 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.49□□□□□ -2.49
CHD1O14646 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.49□□□□□ -2.49
CHD1O14646 RN7SL660P-201ENST00000614852 299 ntBASIC-0.49□□□□□ -2.49
CHD1O14646 MIR412-201ENST00000362142 91 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 RNU4-32P-201ENST00000363404 141 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 SNORD114-3-201ENST00000364969 75 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 RNU6-417P-201ENST00000384712 107 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 MIR145-201ENST00000384967 88 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 MIR892B-201ENST00000401279 77 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 SNORD75.1-201ENST00000408373 60 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 AC016909.1-201ENST00000415916 166 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 MTND2P20-201ENST00000440805 661 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.5□□□□□ -2.49
CHD1O14646 RNU6-782P-201ENST00000516852 104 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.5□□□□□ -2.49
CHD1O14646 AC007014.2-201ENST00000615581 479 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 AL157770.1-201ENST00000623049 439 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.5□□□□□ -2.49
CHD1O14646 MIR6079-201ENST00000635807 62 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 AC006927.4-201ENST00000639187 543 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 SNORA18.1-201ENST00000363418 128 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 RNA5SP205-201ENST00000364653 136 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 SNORA32.2-201ENST00000384049 122 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 SNORD71-201ENST00000411292 86 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.5□□□□□ -2.49
CHD1O14646 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.5□□□□□ -2.49
CHD1O14646 MTCO2P7-201ENST00000446518 666 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 ZNF886P-201ENST00000450781 723 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.5□□□□□ -2.49
CHD1O14646 MIR4743-201ENST00000584576 69 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 AC112187.2-201ENST00000604345 283 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 MIR548AZ-201ENST00000616567 95 ntBASIC-0.5□□□□□ -2.49
CHD1O14646 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.51□□□□□ -2.49
CHD1O14646 RN7SKP266-201ENST00000410232 287 ntBASIC-0.51□□□□□ -2.49
CHD1O14646 RPL18AP17-201ENST00000455326 198 ntBASIC-0.51□□□□□ -2.49
CHD1O14646 RNU6-567P-201ENST00000516746 107 ntBASIC-0.51□□□□□ -2.49
CHD1O14646 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.51□□□□□ -2.49
CHD1O14646 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.52□□□□□ -2.49
CHD1O14646 MIR593-201ENST00000384856 100 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 AL590623.1-201ENST00000427864 105 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 MTATP6P16-201ENST00000434543 526 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 SUMO2P5-201ENST00000506790 245 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 SNORA43.2-201ENST00000516652 128 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.52□□□□□ -2.49
CHD1O14646 TMF1P1-201ENST00000576058 373 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 SNORA59B-202ENST00000578183 701 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 MIR3923-201ENST00000579521 83 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 AL390123.1-201ENST00000603216 237 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 PART1_2.1-201ENST00000612397 250 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 AC015726.2-201ENST00000620112 122 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 SCARNA4-202ENST00000625402 129 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 RNU6-527P-201ENST00000363425 104 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.52□□□□□ -2.49
CHD1O14646 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.52□□□□□ -2.49
CHD1O14646 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.52□□□□□ -2.49
CHD1O14646 AC087883.1-201ENST00000551882 391 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 MIR4300-201ENST00000581016 96 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 AL138889.2-201ENST00000603883 242 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 AL034555.1-201ENST00000604816 211 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 AC004832.4-201ENST00000608952 331 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 AL391903.3-201ENST00000612158 163 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 AL359075.3-201ENST00000613288 217 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms