Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 MTND2P32-201ENST00000521584 1038 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 RNU6-323P-201ENST00000521915 107 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.71□□□□□ -2.3
UBFD1O14562 AC136932.1-201ENST00000574771 208 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 MIR4714-201ENST00000580728 77 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 MIR98-201ENST00000606724 119 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 AC040896.1-201ENST00000613819 479 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 AC106800.4-201ENST00000614905 153 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 AC007742.2-201ENST00000618226 398 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.71□□□□□ -2.3
UBFD1O14562 AC027335.2-201ENST00000624030 375 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
UBFD1O14562 RNU6-434P-201ENST00000384376 107 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 SNORA25-201ENST00000384384 134 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 RNA5SP109-201ENST00000391010 116 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 MIR1283-1-201ENST00000408494 87 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 RNU4-46P-201ENST00000410818 138 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.7□□□□□ -2.3
UBFD1O14562 AC004941.2-201ENST00000427009 228 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.7□□□□□ -2.3
UBFD1O14562 AC002486.1-201ENST00000435098 391 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 AL606517.2-201ENST00000442855 241 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 PGBD4P5-201ENST00000445958 426 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.7□□□□□ -2.3
UBFD1O14562 RPS26P45-201ENST00000471748 340 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 SNORD116-28-201ENST00000516123 91 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.7□□□□□ -2.3
UBFD1O14562 AP003072.2-201ENST00000527756 676 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 MIR4709-201ENST00000577272 72 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 RSL24D1P11-201ENST00000591045 491 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 AL022345.2-201ENST00000606307 135 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 BX284668.6-201ENST00000606899 438 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 AC064807.4-201ENST00000607201 407 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 AC104458.1-201ENST00000608243 463 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 AL353149.1-201ENST00000610667 244 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 AC009509.4-201ENST00000619202 509 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 AC068700.1-201ENST00000565862 3754 ntBASIC0.7□□□□□ -2.3
UBFD1O14562 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
UBFD1O14562 RNU6-108P-201ENST00000365558 107 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 RNU6-968P-201ENST00000384076 107 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 Y_RNA.480-201ENST00000384364 102 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 RNU6-297P-201ENST00000384636 107 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 AC004866.1-201ENST00000411748 78 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 AC010154.1-201ENST00000425857 269 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.69□□□□□ -2.3
UBFD1O14562 HMGN2P34-201ENST00000437647 269 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 RNU7-34P-201ENST00000459394 64 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 SNORD11.1-201ENST00000459482 85 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 HMGN1P12-201ENST00000499125 195 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 AC010486.2-201ENST00000505572 483 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 RNU6-567P-201ENST00000516746 107 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.69□□□□□ -2.3
UBFD1O14562 MTCO3P23-201ENST00000561363 289 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 MIR5583-1-201ENST00000580941 59 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 AC008088.1-201ENST00000580993 280 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.69□□□□□ -2.3
UBFD1O14562 AC245884.10-201ENST00000597355 337 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 AL929325.1-201ENST00000603096 117 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 RNU6-85P-201ENST00000605989 107 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 AL136370.1-201ENST00000608166 691 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 AC016597.2-201ENST00000613256 341 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
UBFD1O14562 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.69□□□□□ -2.3
UBFD1O14562 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
UBFD1O14562 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
UBFD1O14562 RNU6-562P-201ENST00000362731 107 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 RNU6-1097P-201ENST00000363586 107 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 RNU1-124P-201ENST00000363861 145 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 RNU4-41P-201ENST00000364426 143 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 Y_RNA.287-201ENST00000364853 94 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 RNU4-48P-201ENST00000365559 182 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 RNU6-417P-201ENST00000384712 107 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 SNORA40.3-201ENST00000390964 122 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 RNA5SP467-201ENST00000391274 118 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 BX295541.1-201ENST00000417774 250 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 AC090960.1-201ENST00000421072 306 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 Z99497.1-201ENST00000421282 135 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.68□□□□□ -2.3
UBFD1O14562 RNU6-1069P-201ENST00000516612 133 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 RN7SKP49-201ENST00000516675 260 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 CYCSP23-201ENST00000519781 313 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.68□□□□□ -2.3
UBFD1O14562 DEFB108E-201ENST00000524692 240 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
UBFD1O14562 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.68□□□□□ -2.3
UBFD1O14562 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.68□□□□□ -2.3
UBFD1O14562 RPL17P51-201ENST00000605218 238 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 AC092354.1-201ENST00000606057 376 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
UBFD1O14562 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
UBFD1O14562 RNU6-534P-201ENST00000364877 106 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 SNORD73A-201ENST00000386062 65 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 AC010099.3-201ENST00000423896 409 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 TIMM9P3-201ENST00000428659 274 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 AC069257.2-201ENST00000441819 155 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 AC004386.2-201ENST00000441858 148 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
UBFD1O14562 HSPE1P13-201ENST00000451143 297 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 RNU7-125P-201ENST00000458760 62 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 RNU6-1129P-201ENST00000515964 104 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 256.9 ms