Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAFD1O14545 AC021231.3-201ENST00000558497 370 ntBASIC1.95□□□□□ -2.1
TRAFD1O14545 MIR3923-201ENST00000579521 83 ntBASIC1.95□□□□□ -2.1
TRAFD1O14545 MIR3136-201ENST00000583498 78 ntBASIC1.95□□□□□ -2.1
TRAFD1O14545 AC010928.2-201ENST00000588017 287 ntBASIC1.95□□□□□ -2.1
TRAFD1O14545 AC025253.1-201ENST00000613623 543 ntBASIC1.95□□□□□ -2.1
TRAFD1O14545 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAFD1O14545 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
TRAFD1O14545 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
TRAFD1O14545 AP000560.1-201ENST00000624150 1937 ntBASIC1.94□□□□□ -2.1
TRAFD1O14545 RNU4-56P-201ENST00000364700 142 ntBASIC1.94□□□□□ -2.1
TRAFD1O14545 RNU6-310P-201ENST00000384655 107 ntBASIC1.94□□□□□ -2.1
TRAFD1O14545 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TRAFD1O14545 SNORA26.3-201ENST00000391119 136 ntBASIC1.94□□□□□ -2.1
TRAFD1O14545 RNU6-174P-201ENST00000410406 106 ntBASIC1.94□□□□□ -2.1
TRAFD1O14545 RNU2-32P-201ENST00000411193 191 ntBASIC1.94□□□□□ -2.1
TRAFD1O14545 AL590556.1-201ENST00000423231 483 ntBASIC1.94□□□□□ -2.1
TRAFD1O14545 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.94□□□□□ -2.1
TRAFD1O14545 MTCO3P10-201ENST00000455912 772 ntBASIC1.94□□□□□ -2.1
TRAFD1O14545 RNA5SP233-201ENST00000459153 113 ntBASIC1.94□□□□□ -2.1
TRAFD1O14545 Y_RNA.632-201ENST00000459189 102 ntBASIC1.94□□□□□ -2.1
TRAFD1O14545 AC022447.4-201ENST00000504053 364 ntBASIC1.94□□□□□ -2.1
TRAFD1O14545 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAFD1O14545 MIR4529-201ENST00000578110 78 ntBASIC1.94□□□□□ -2.1
TRAFD1O14545 AC007229.1-201ENST00000590455 412 ntBASIC1.94□□□□□ -2.1
TRAFD1O14545 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAFD1O14545 AC008121.3-201ENST00000618726 433 ntBASIC1.94□□□□□ -2.1
TRAFD1O14545 RNU5B-2P-201ENST00000363036 113 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 RNU6-1188P-201ENST00000363795 107 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 Y_RNA.259-201ENST00000364619 101 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 Y_RNA.384-201ENST00000383909 102 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 Y_RNA.387-201ENST00000383918 102 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 RNU6-1297P-201ENST00000384415 104 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 MIR32-201ENST00000384965 70 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 U8.13-201ENST00000390842 128 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 MTCYBP4-201ENST00000401524 249 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 NCOR1P3-201ENST00000420479 303 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 AL358453.1-201ENST00000422522 250 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAFD1O14545 TOMM22P6-201ENST00000465035 409 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 MTND3P22-201ENST00000510932 243 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.93□□□□□ -2.1
TRAFD1O14545 RNA5SP137-201ENST00000516833 135 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAFD1O14545 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.93□□□□□ -2.1
TRAFD1O14545 CYP4A27P-201ENST00000567218 190 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.93□□□□□ -2.1
TRAFD1O14545 AC005014.2-201ENST00000607795 599 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 PCGEM1.1-201ENST00000613431 131 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 AC022202.1-201ENST00000613515 211 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 AC084781.2-201ENST00000615568 161 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 SDR42E1P4-201ENST00000620894 481 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAFD1O14545 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.93□□□□□ -2.1
TRAFD1O14545 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TRAFD1O14545 RNU6-593P-201ENST00000364716 112 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 SNORD116-29-201ENST00000384516 83 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 MIR29B2-201ENST00000385055 81 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 MIR95-201ENST00000385072 81 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 MIR1289-2-201ENST00000408360 111 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 EIF4EP2-201ENST00000422816 654 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 AC009238.1-201ENST00000442165 424 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.92□□□□□ -2.1
TRAFD1O14545 AC009237.6-201ENST00000446969 424 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 RPL30P10-201ENST00000488148 337 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 SNORA4.4-201ENST00000515921 135 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 RNA5SP182-201ENST00000516064 82 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 RNU2-44P-201ENST00000516795 194 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAFD1O14545 AC110588.1-201ENST00000559699 137 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAFD1O14545 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 AL162373.1-201ENST00000620433 407 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
TRAFD1O14545 AC008555.8-201ENST00000623602 2168 ntBASIC1.92□□□□□ -2.1
TRAFD1O14545 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
TRAFD1O14545 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
TRAFD1O14545 RNU6-234P-201ENST00000365229 104 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 RNU6-546P-201ENST00000383991 107 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 RNU6-890P-201ENST00000384121 107 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 AC019129.1-201ENST00000403786 261 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 RNA5SP201-201ENST00000410316 124 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 EDDM3CP-201ENST00000415977 425 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 AC243428.1-201ENST00000421099 264 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 USMG5P1-201ENST00000425964 177 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 AC107032.1-201ENST00000485945 480 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 AC018868.1-201ENST00000491307 315 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAFD1O14545 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 FGF7P4-201ENST00000509595 295 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 SNORA48.11-201ENST00000517015 89 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAFD1O14545 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.91□□□□□ -2.1
TRAFD1O14545 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAFD1O14545 MIR3126-201ENST00000577443 74 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 MIR5696-201ENST00000578474 85 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
TRAFD1O14545 AL117336.2-201ENST00000602435 335 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 LARP7P1-201ENST00000605576 316 ntBASIC1.91□□□□□ -2.1
TRAFD1O14545 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms