Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC016727.2-201ENST00000603988 621 ntBASIC1.22□□□□□ -2.21
CDC7O00311 AC005562.2-201ENST00000618264 111 ntBASIC1.22□□□□□ -2.21
CDC7O00311 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC7O00311 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
CDC7O00311 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CDC7O00311 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CDC7O00311 Y_RNA.191-201ENST00000363972 113 ntBASIC1.21□□□□□ -2.22
CDC7O00311 RNU6-1317P-201ENST00000364582 104 ntBASIC1.21□□□□□ -2.22
CDC7O00311 SNORD116-8-201ENST00000384365 95 ntBASIC1.21□□□□□ -2.22
CDC7O00311 MIR1283-1-201ENST00000408494 87 ntBASIC1.21□□□□□ -2.22
CDC7O00311 RPS27P16-201ENST00000425758 201 ntBASIC1.21□□□□□ -2.22
CDC7O00311 MTCO1P19-201ENST00000443487 500 ntBASIC1.21□□□□□ -2.22
CDC7O00311 RPL31P58-201ENST00000469001 379 ntBASIC1.21□□□□□ -2.22
CDC7O00311 AC079140.3-201ENST00000511111 550 ntBASIC1.21□□□□□ -2.22
CDC7O00311 AC067942.3-201ENST00000512025 362 ntBASIC1.21□□□□□ -2.22
CDC7O00311 RN7SKP298-201ENST00000515950 94 ntBASIC1.21□□□□□ -2.22
CDC7O00311 RNU6-1069P-201ENST00000516612 133 ntBASIC1.21□□□□□ -2.22
CDC7O00311 AC087854.1-201ENST00000519706 414 ntBASIC1.21□□□□□ -2.22
CDC7O00311 OSBPL9P5-201ENST00000542581 171 ntBASIC1.21□□□□□ -2.22
CDC7O00311 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC7O00311 AC119751.7-201ENST00000600494 245 ntBASIC1.21□□□□□ -2.22
CDC7O00311 Z99497.2-201ENST00000603634 310 ntBASIC1.21□□□□□ -2.22
CDC7O00311 AC126177.8-201ENST00000618339 1015 ntBASIC1.21□□□□□ -2.22
CDC7O00311 AC103705.1-201ENST00000619013 241 ntBASIC1.21□□□□□ -2.22
CDC7O00311 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
CDC7O00311 AC091895.1-201ENST00000624494 256 ntBASIC1.21□□□□□ -2.22
CDC7O00311 RNU5B-2P-201ENST00000363036 113 ntBASIC1.2□□□□□ -2.22
CDC7O00311 SNORD1A-201ENST00000364968 72 ntBASIC1.2□□□□□ -2.22
CDC7O00311 Y_RNA.359-201ENST00000365498 102 ntBASIC1.2□□□□□ -2.22
CDC7O00311 Y_RNA.378-201ENST00000365652 113 ntBASIC1.2□□□□□ -2.22
CDC7O00311 MIR549A-201ENST00000385268 96 ntBASIC1.2□□□□□ -2.22
CDC7O00311 MIR300-201ENST00000401138 83 ntBASIC1.2□□□□□ -2.22
CDC7O00311 RNU4-55P-201ENST00000410731 137 ntBASIC1.2□□□□□ -2.22
CDC7O00311 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.2□□□□□ -2.22
CDC7O00311 AC015922.2-201ENST00000435593 184 ntBASIC1.2□□□□□ -2.22
CDC7O00311 AC011406.1-201ENST00000512440 370 ntBASIC1.2□□□□□ -2.22
CDC7O00311 RNU6-902P-201ENST00000517212 91 ntBASIC1.2□□□□□ -2.22
CDC7O00311 AC019176.1-201ENST00000518519 225 ntBASIC1.2□□□□□ -2.22
CDC7O00311 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC7O00311 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC7O00311 MIR4753-201ENST00000585119 83 ntBASIC1.2□□□□□ -2.22
CDC7O00311 MIR5692C1-201ENST00000585309 91 ntBASIC1.2□□□□□ -2.22
CDC7O00311 AL357078.3-201ENST00000607528 618 ntBASIC1.2□□□□□ -2.22
CDC7O00311 AL353149.1-201ENST00000610667 244 ntBASIC1.2□□□□□ -2.22
CDC7O00311 AL121757.2-201ENST00000611223 313 ntBASIC1.2□□□□□ -2.22
CDC7O00311 RMST_3.1-201ENST00000611651 109 ntBASIC1.2□□□□□ -2.22
CDC7O00311 AC078883.4-201ENST00000623218 367 ntBASIC1.2□□□□□ -2.22
CDC7O00311 FER-210ENST00000628534 558 ntTSL 5 BASIC1.2□□□□□ -2.22
CDC7O00311 AC091812.1-201ENST00000432235 1948 ntBASIC1.2□□□□□ -2.22
CDC7O00311 Y_RNA.123-201ENST00000363338 102 ntBASIC1.19□□□□□ -2.22
CDC7O00311 RNU6-82P-201ENST00000363970 107 ntBASIC1.19□□□□□ -2.22
CDC7O00311 RNU4-66P-201ENST00000365199 138 ntBASIC1.19□□□□□ -2.22
CDC7O00311 RNU4-20P-201ENST00000365601 151 ntBASIC1.19□□□□□ -2.22
CDC7O00311 RNU6-1329P-201ENST00000365664 107 ntBASIC1.19□□□□□ -2.22
CDC7O00311 Y_RNA.466-201ENST00000384294 113 ntBASIC1.19□□□□□ -2.22
CDC7O00311 Y_RNA.553-201ENST00000384670 102 ntBASIC1.19□□□□□ -2.22
CDC7O00311 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.19□□□□□ -2.22
CDC7O00311 TIMM9P3-201ENST00000428659 274 ntBASIC1.19□□□□□ -2.22
CDC7O00311 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.19□□□□□ -2.22
CDC7O00311 MTND1P26-201ENST00000440488 538 ntBASIC1.19□□□□□ -2.22
CDC7O00311 AC004386.2-201ENST00000441858 148 ntBASIC1.19□□□□□ -2.22
CDC7O00311 U8.21-201ENST00000459536 136 ntBASIC1.19□□□□□ -2.22
CDC7O00311 AC099513.1-201ENST00000490423 301 ntBASIC1.19□□□□□ -2.22
CDC7O00311 AC091133.4-201ENST00000511142 308 ntBASIC1.19□□□□□ -2.22
CDC7O00311 RNA5SP401-201ENST00000515920 127 ntBASIC1.19□□□□□ -2.22
CDC7O00311 RNA5SP384-201ENST00000516615 116 ntBASIC1.19□□□□□ -2.22
CDC7O00311 RNA5SP481-201ENST00000516814 122 ntBASIC1.19□□□□□ -2.22
CDC7O00311 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.19□□□□□ -2.22
CDC7O00311 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.19□□□□□ -2.22
CDC7O00311 MRPS36P4-201ENST00000534436 298 ntBASIC1.19□□□□□ -2.22
CDC7O00311 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.19□□□□□ -2.22
CDC7O00311 SCOCP1-201ENST00000554676 349 ntBASIC1.19□□□□□ -2.22
CDC7O00311 MTND3P12-201ENST00000559068 328 ntBASIC1.19□□□□□ -2.22
CDC7O00311 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.19□□□□□ -2.22
CDC7O00311 MIR4452-201ENST00000583004 71 ntBASIC1.19□□□□□ -2.22
CDC7O00311 MIR5006-201ENST00000583027 110 ntBASIC1.19□□□□□ -2.22
CDC7O00311 SNORA4-201ENST00000584302 138 ntBASIC1.19□□□□□ -2.22
CDC7O00311 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.19□□□□□ -2.22
CDC7O00311 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.19□□□□□ -2.22
CDC7O00311 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.19□□□□□ -2.22
CDC7O00311 BX322639.1-202ENST00000423987 2213 ntBASIC1.19□□□□□ -2.22
CDC7O00311 ELL2P3-201ENST00000457883 1602 ntBASIC1.18□□□□□ -2.22
CDC7O00311 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.18□□□□□ -2.22
CDC7O00311 MIR26B-201ENST00000362251 77 ntBASIC1.18□□□□□ -2.22
CDC7O00311 SNORA33-201ENST00000363664 130 ntBASIC1.18□□□□□ -2.22
CDC7O00311 RNU6-1286P-201ENST00000383871 107 ntBASIC1.18□□□□□ -2.22
CDC7O00311 RNU6-38P-201ENST00000384085 107 ntBASIC1.18□□□□□ -2.22
CDC7O00311 RNU6-331P-201ENST00000384724 107 ntBASIC1.18□□□□□ -2.22
CDC7O00311 RNA5SP494-201ENST00000410653 129 ntBASIC1.18□□□□□ -2.22
CDC7O00311 AC004866.1-201ENST00000411748 78 ntBASIC1.18□□□□□ -2.22
CDC7O00311 RPS26P42-201ENST00000413485 326 ntBASIC1.18□□□□□ -2.22
CDC7O00311 MTCO3P29-201ENST00000432119 779 ntBASIC1.18□□□□□ -2.22
CDC7O00311 FTH1P12-201ENST00000432137 551 ntBASIC1.18□□□□□ -2.22
CDC7O00311 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.18□□□□□ -2.22
CDC7O00311 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.18□□□□□ -2.22
CDC7O00311 AC016717.1-201ENST00000448918 286 ntBASIC1.18□□□□□ -2.22
CDC7O00311 OR2AQ1P-201ENST00000451972 200 ntBASIC1.18□□□□□ -2.22
CDC7O00311 AC010424.1-201ENST00000506336 297 ntBASIC1.18□□□□□ -2.22
CDC7O00311 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.18□□□□□ -2.22
CDC7O00311 SNORA19.2-201ENST00000516013 114 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms