Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 uc_338.16-201ENST00000621804 95 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 AC006001.4-201ENST00000622243 395 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 AP000943.4-201ENST00000622912 357 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU6-562P-201ENST00000362731 107 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU6-946P-201ENST00000383878 107 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU6-975P-201ENST00000384296 105 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 MIR520G-201ENST00000385064 90 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 MIR520H-201ENST00000385126 88 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 MTCO1P17-201ENST00000411522 491 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 MTND3P17-201ENST00000416968 344 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 AL953862.1-201ENST00000423016 168 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 AC078809.1-201ENST00000427601 140 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 AC010975.2-201ENST00000427781 588 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 CALM2P4-201ENST00000430810 426 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 MTND4P15-201ENST00000437913 1033 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 AC093850.1-201ENST00000454121 251 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 MIR4764-201ENST00000580680 88 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 AC078795.3-201ENST00000602913 472 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 PART1_2.1-201ENST00000612397 250 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 U4.7-201ENST00000638126 106 ntBASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.54□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 RNA5SP275-201ENST00000363936 118 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 MIR593-201ENST00000384856 100 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 U8.16-201ENST00000391279 133 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 MIR1253-201ENST00000408273 105 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 AC016909.1-201ENST00000415916 166 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 AC006366.1-201ENST00000422002 759 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 MTND4LP7-201ENST00000431728 294 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 AC105185.1-201ENST00000518705 535 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 AC092447.9-201ENST00000603395 144 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 Z99497.2-201ENST00000603634 310 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 SNORA28-201ENST00000606769 126 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 AC005520.5-201ENST00000613926 164 ntBASIC-0.55□□□□□ -2.5
CHKB-CPT1BH3BT56 SNORA25.3-201ENST00000363205 127 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 RNA5SP325-201ENST00000363756 130 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 MIR578-201ENST00000384828 96 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 MIR106A-201ENST00000384870 81 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 MIR549A-201ENST00000385268 96 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU6-127P-201ENST00000390897 107 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 PCNPP3-201ENST00000393579 471 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU2-59P-201ENST00000410482 191 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 AC019070.1-201ENST00000415008 1024 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 AC106883.1-201ENST00000418805 562 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 AC096531.1-201ENST00000419107 107 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 AC010468.3-201ENST00000508225 458 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 SCARNA8-201ENST00000515924 131 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 RN7SKP287-201ENST00000516546 266 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 RNA5SP268-201ENST00000516828 124 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU7-128P-201ENST00000517247 62 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 OR8K2P-201ENST00000524645 927 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 AP002453.2-201ENST00000533503 320 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 AK6P2-201ENST00000549020 471 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 MIR548AO-201ENST00000579992 96 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 AC005176.2-201ENST00000596933 147 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 AL445435.1-201ENST00000604232 665 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 AC007684.1-201ENST00000609671 477 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 AC097478.2-201ENST00000610572 514 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 FRG1KP-201ENST00000623592 341 ntBASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.56□□□□□ -2.5
CHKB-CPT1BH3BT56 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.57□□□□□ -2.5
CHKB-CPT1BH3BT56 MIR16-2-201ENST00000362117 81 ntBASIC-0.57□□□□□ -2.5
CHKB-CPT1BH3BT56 MIR643-201ENST00000385267 97 ntBASIC-0.57□□□□□ -2.5
CHKB-CPT1BH3BT56 MIR548H2-201ENST00000408874 88 ntBASIC-0.57□□□□□ -2.5
CHKB-CPT1BH3BT56 RPS3AP3-201ENST00000411933 242 ntBASIC-0.57□□□□□ -2.5
CHKB-CPT1BH3BT56 AL031779.1-201ENST00000415663 330 ntBASIC-0.57□□□□□ -2.5
CHKB-CPT1BH3BT56 MED13P1-201ENST00000428342 171 ntBASIC-0.57□□□□□ -2.5
CHKB-CPT1BH3BT56 AC114878.1-201ENST00000441166 358 ntBASIC-0.57□□□□□ -2.5
CHKB-CPT1BH3BT56 AC079382.1-201ENST00000493346 557 ntBASIC-0.57□□□□□ -2.5
CHKB-CPT1BH3BT56 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.57□□□□□ -2.5
CHKB-CPT1BH3BT56 DEFB131C-201ENST00000528817 165 ntBASIC-0.57□□□□□ -2.5
CHKB-CPT1BH3BT56 Z99289.3-201ENST00000605586 594 ntBASIC-0.57□□□□□ -2.5
CHKB-CPT1BH3BT56 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.57□□□□□ -2.5
CHKB-CPT1BH3BT56 AC011155.2-201ENST00000623202 216 ntBASIC-0.57□□□□□ -2.5
CHKB-CPT1BH3BT56 SNORA1.1-201ENST00000364671 133 ntBASIC-0.58□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.58□□□□□ -2.5
CHKB-CPT1BH3BT56 TIMM9P2-201ENST00000419324 266 ntBASIC-0.58□□□□□ -2.5
CHKB-CPT1BH3BT56 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms