Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 CYP2C59P-201ENST00000457790 269 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC107032.1-201ENST00000485945 480 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC015911.1-201ENST00000495111 156 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 MTCO1P29-201ENST00000496868 288 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-566P-201ENST00000516790 107 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNA5SP454-201ENST00000517231 127 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC034114.1-201ENST00000520293 285 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AP005639.2-201ENST00000527592 928 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AL161670.1-201ENST00000554348 137 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 MIR4742-201ENST00000581069 85 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 MIR3136-201ENST00000583498 78 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 Z98751.3-201ENST00000604447 521 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 MIR3976-201ENST00000606807 139 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 MIR8076-201ENST00000611401 83 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 PCGEM1.1-201ENST00000613431 131 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC005520.5-201ENST00000613926 164 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 MIR8070-201ENST00000616510 88 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC009033.1-201ENST00000624279 431 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC092268.1-201ENST00000342691 405 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-392P-201ENST00000364926 101 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNA5SP240-201ENST00000365355 128 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 SNORA29-201ENST00000384183 140 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-378P-201ENST00000384324 107 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 Y_RNA.504-201ENST00000384481 104 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 MIR561-201ENST00000385216 97 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 MT-TL1-201ENST00000386347 75 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU2-63P-201ENST00000410792 194 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 AL158823.1-201ENST00000418441 478 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 PDCL2P1-201ENST00000419302 352 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 MTATP6P13-201ENST00000438531 667 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 AL137159.1-201ENST00000452808 512 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 SNRPGP7-201ENST00000469016 106 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC145146.1-201ENST00000496370 254 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC021146.2-201ENST00000504736 556 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC018710.1-201ENST00000506509 158 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU1-92P-201ENST00000517017 135 ntBASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.49□□□□□ -2.17
TMX2-CTNND1H3BSU7 CASC19-280ENST00000642102 1351 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 SNORA32.2-201ENST00000384049 122 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 MIR29B2-201ENST00000385055 81 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 MIR1262-201ENST00000408276 93 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU2-32P-201ENST00000411193 191 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 MTND3P8-201ENST00000412909 339 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC130509.1-201ENST00000464158 433 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 AF186996.7-201ENST00000492781 209 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 MTND5P5-201ENST00000503764 376 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC016632.1-201ENST00000503994 196 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC022616.8-201ENST00000533569 253 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC016256.1-201ENST00000547971 354 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 FGF7P1-201ENST00000582820 288 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 AL645939.4-201ENST00000604495 135 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC009994.1-201ENST00000606889 253 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 AL359314.1-201ENST00000616913 261 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC008121.3-201ENST00000618726 433 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC090517.3-201ENST00000625170 141 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC009541.1-201ENST00000438279 2662 ntBASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
TMX2-CTNND1H3BSU7 MIR340-201ENST00000362125 95 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 Y_RNA.123-201ENST00000363338 102 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-1286P-201ENST00000383871 107 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-842P-201ENST00000384269 107 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 MIR934-201ENST00000401241 83 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 MIR548K-201ENST00000408406 116 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 RN7SKP51-201ENST00000410781 304 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC138393.2-201ENST00000414742 246 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 EDDM3CP-201ENST00000415977 425 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC012306.1-201ENST00000423267 114 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 CBX3P6-201ENST00000430257 527 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC009238.1-201ENST00000442165 424 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC009237.6-201ENST00000446969 424 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 SNORA4.4-201ENST00000515921 135 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-965P-201ENST00000516721 96 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-667P-201ENST00000517186 102 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 DEFB131C-201ENST00000528817 165 ntBASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.47□□□□□ -2.17
TMX2-CTNND1H3BSU7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-845P-201ENST00000362578 103 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms