Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC015720.1-201ENST00000565251 277 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AL355802.3-201ENST00000607571 545 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AL365434.2-201ENST00000607979 234 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AC009318.2-201ENST00000610917 651 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AC040896.1-201ENST00000613819 479 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AC068792.1-201ENST00000621354 417 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AC009033.1-201ENST00000624279 431 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 MIR3974-201ENST00000637126 96 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AC092881.1-201ENST00000638218 2733 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
SMKR1H3BMG3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
SMKR1H3BMG3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 RNA5SP327-201ENST00000362494 101 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 Y_RNA.167-201ENST00000363735 109 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 RNU6-939P-201ENST00000384634 107 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 RNU6-950P-201ENST00000384651 107 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 RNA5SP323-201ENST00000391094 133 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 RNA5SP467-201ENST00000391274 118 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.01□□□□□ -2.25
SMKR1H3BMG3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.01□□□□□ -2.25
SMKR1H3BMG3 RPL23AP75-201ENST00000491601 451 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.01□□□□□ -2.25
SMKR1H3BMG3 RNU6-344P-201ENST00000516635 111 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 RNU6-1332P-201ENST00000516666 104 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 AL161670.1-201ENST00000554348 137 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.01□□□□□ -2.25
SMKR1H3BMG3 MIR4648-201ENST00000580107 72 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 MZT1P2-201ENST00000604387 248 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.01□□□□□ -2.25
SMKR1H3BMG3 AC073534.2-201ENST00000620377 381 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 MIR8065-201ENST00000620577 100 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 AL078596.1-201ENST00000624856 447 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 AC008873.1-201ENST00000625051 138 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 snoZ196.1-201ENST00000625269 89 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 AC090582.1-201ENST00000636321 199 ntBASIC1.01□□□□□ -2.25
SMKR1H3BMG3 ZNF204P-201ENST00000416749 2397 ntBASIC1□□□□□ -2.25
SMKR1H3BMG3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1□□□□□ -2.25
SMKR1H3BMG3 AC121333.1-201ENST00000567488 2709 ntBASIC1□□□□□ -2.25
SMKR1H3BMG3 Y_RNA.409-201ENST00000383990 98 ntBASIC1□□□□□ -2.25
SMKR1H3BMG3 RPL21P1-201ENST00000399532 476 ntBASIC1□□□□□ -2.25
SMKR1H3BMG3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1□□□□□ -2.25
SMKR1H3BMG3 AC008134.1-201ENST00000420943 193 ntBASIC1□□□□□ -2.25
SMKR1H3BMG3 TRBV12-1-201ENST00000479785 344 ntBASIC1□□□□□ -2.25
SMKR1H3BMG3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1□□□□□ -2.25
SMKR1H3BMG3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1□□□□□ -2.25
SMKR1H3BMG3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1□□□□□ -2.25
SMKR1H3BMG3 SNORA25.15-201ENST00000516487 89 ntBASIC1□□□□□ -2.25
SMKR1H3BMG3 RNU6-835P-201ENST00000516974 104 ntBASIC1□□□□□ -2.25
SMKR1H3BMG3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1□□□□□ -2.25
SMKR1H3BMG3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1□□□□□ -2.25
SMKR1H3BMG3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1□□□□□ -2.25
SMKR1H3BMG3 AC068338.1-201ENST00000565567 176 ntBASIC1□□□□□ -2.25
SMKR1H3BMG3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1□□□□□ -2.25
SMKR1H3BMG3 Six3os1_7.1-201ENST00000621512 201 ntBASIC1□□□□□ -2.25
SMKR1H3BMG3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
SMKR1H3BMG3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SMKR1H3BMG3 MIR449A-201ENST00000362113 91 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 RNA5SP259-201ENST00000365541 109 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 MIR517C-201ENST00000385103 95 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 MIR514A2-201ENST00000385131 88 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 MIR514A3-201ENST00000385132 88 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 MIR758-201ENST00000390227 88 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
SMKR1H3BMG3 RNA5SP109-201ENST00000391010 116 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 DEFB108C-201ENST00000400154 252 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 MIR450B-201ENST00000401182 78 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.99□□□□□ -2.25
SMKR1H3BMG3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.99□□□□□ -2.25
SMKR1H3BMG3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.99□□□□□ -2.25
SMKR1H3BMG3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.99□□□□□ -2.25
SMKR1H3BMG3 RNU1-142P-201ENST00000516682 145 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 RNA5SP54-201ENST00000516951 92 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 AC025647.1-201ENST00000517879 253 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 AC026371.1-201ENST00000551867 419 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 MIR3664-201ENST00000579074 99 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 AC004492.1-201ENST00000607036 742 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 AC097065.2-201ENST00000608159 533 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 AL133215.3-201ENST00000609801 448 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 FAM157A-202ENST00000615155 405 ntBASIC0.99□□□□□ -2.25
SMKR1H3BMG3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.99□□□□□ -2.25
SMKR1H3BMG3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
SMKR1H3BMG3 RNU6-1240P-201ENST00000365155 104 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 RNU6-245P-201ENST00000384020 107 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 U8.10-201ENST00000384260 133 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SMKR1H3BMG3 SNORA67.6-201ENST00000391093 99 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SMKR1H3BMG3 RNU6-648P-201ENST00000410190 107 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 AC016909.1-201ENST00000415916 166 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.98□□□□□ -2.25
SMKR1H3BMG3 MTCO1P20-201ENST00000425366 358 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 AC007677.1-201ENST00000445757 515 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.98□□□□□ -2.25
SMKR1H3BMG3 TPT1P7-201ENST00000458300 517 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 RNU6-221P-201ENST00000459541 99 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 AC010486.3-201ENST00000511602 785 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 RN7SKP88-201ENST00000516847 250 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 SNORA31.24-201ENST00000517232 57 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms