Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 ATP5EP1-201ENST00000510257 156 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU6-1098P-201ENST00000516772 96 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU6-250P-201ENST00000516958 103 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 MIR4790-201ENST00000577799 79 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 AC026271.5-201ENST00000577873 130 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 MIR5696-201ENST00000578474 85 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 AC010928.2-201ENST00000588017 287 ntBASIC1.82□□□□□ -2.12
NEDD8-MDP1E9PL57 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU6-845P-201ENST00000362578 103 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU6-1059P-201ENST00000363752 98 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU6-1164P-201ENST00000364428 107 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU6-767P-201ENST00000384132 107 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 U8.10-201ENST00000384260 133 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU6-842P-201ENST00000384269 107 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU6-876P-201ENST00000391295 104 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 PDCL2P1-201ENST00000419302 352 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 EIF4EP2-201ENST00000422816 654 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 USP9YP30-201ENST00000430729 455 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 SNORD5.1-201ENST00000458800 75 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 AC087477.1-201ENST00000465747 340 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 AC055731.1-201ENST00000474387 401 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 RN7SL274P-201ENST00000492268 272 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 DEFB131C-201ENST00000528817 165 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 MIR3683-201ENST00000580847 82 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 AP000654.2-201ENST00000605633 586 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NEDD8-MDP1E9PL57 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU1-76P-201ENST00000362903 159 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 Y_RNA.184-201ENST00000363884 108 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 MIR518A2-201ENST00000384966 87 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 MIR487A-201ENST00000385009 80 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 AC138393.2-201ENST00000414742 246 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 AL358453.1-201ENST00000422522 250 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 Z82188.1-201ENST00000436709 154 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 OR2AQ1P-201ENST00000451972 200 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 AC007215.1-201ENST00000464893 276 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 RPL31P58-201ENST00000469001 379 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 FO393415.2-201ENST00000480085 343 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 ACA59.1-201ENST00000515966 143 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU7-30P-201ENST00000516835 62 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU2-19P-201ENST00000517288 84 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 AC087441.2-201ENST00000529141 262 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 AP000942.3-201ENST00000603702 160 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 AC016727.2-201ENST00000603988 621 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 AL627230.6-201ENST00000611129 280 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 MIR6128-201ENST00000615528 109 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 AC022306.2-201ENST00000617563 647 ntBASIC1.8□□□□□ -2.12
NEDD8-MDP1E9PL57 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 MIR340-201ENST00000362125 95 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 Y_RNA.166-201ENST00000363730 102 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 Y_RNA.332-201ENST00000365271 113 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 SNORA12.2-201ENST00000391040 156 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 MIR548F5-201ENST00000408421 86 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 MIR1283-2-201ENST00000408621 87 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 RPL21P111-201ENST00000418453 477 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 AL035666.1-201ENST00000446195 348 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 PMCHL2-203ENST00000457791 237 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 TOMM22P6-201ENST00000465035 409 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 MRPS17P9-201ENST00000511924 393 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 SNORA20.3-201ENST00000516880 132 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 AC090517.1-201ENST00000569307 266 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 AC078899.2-201ENST00000595282 212 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 MIR502-201ENST00000606349 86 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 SCARNA4-201ENST00000629045 128 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 AC099654.14-201ENST00000638599 341 ntBASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
NEDD8-MDP1E9PL57 MTND5P9-201ENST00000503854 1755 ntBASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 Y_RNA.99-201ENST00000363138 105 ntBASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 SNORD14D-201ENST00000384390 87 ntBASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 MIR549A-201ENST00000385268 96 ntBASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 SNORA17.3-201ENST00000391159 129 ntBASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 AC243428.1-201ENST00000421099 264 ntBASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 AL139396.1-201ENST00000421137 167 ntBASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 AC108667.1-201ENST00000428618 249 ntBASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 PRDX4P1-201ENST00000507189 574 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms