Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL358453.1-201ENST00000422522 250 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 AL353689.1-201ENST00000438895 199 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 RPL23AP42-201ENST00000471152 471 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 AC046134.1-201ENST00000514454 666 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-1016P-201ENST00000516689 94 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 IMMP1LP2-201ENST00000552954 492 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 DEFB122-202ENST00000569013 197 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 AC005668.1-201ENST00000571142 476 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 MIR4524B-201ENST00000581569 115 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 MIR4795-201ENST00000584182 89 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 AC005034.5-201ENST00000604219 466 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 AP000654.2-201ENST00000605633 586 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-91P-201ENST00000607774 107 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 MIR8076-201ENST00000611401 83 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 MIR8081-201ENST00000611533 95 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 MIR6845-201ENST00000613182 61 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 AL669831.3-213ENST00000636676 183 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AC002543.1-201ENST00000299783 1954 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-222P-201ENST00000362438 107 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 RNU4-73P-201ENST00000363164 141 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 Y_RNA.419-201ENST00000384041 102 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-310P-201ENST00000384655 107 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 SNORA26.3-201ENST00000391119 136 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 RNA5SP201-201ENST00000410316 124 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-1050P-201ENST00000410388 107 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-174P-201ENST00000410406 106 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 RN7SKP61-201ENST00000410642 295 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-1245P-201ENST00000411130 106 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 RPL37P10-201ENST00000412884 288 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 RPL23AP3-201ENST00000453844 468 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 SNORD5.1-201ENST00000458800 75 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 U8.22-201ENST00000459141 133 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 Y_RNA.632-201ENST00000459189 102 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 TOMM22P6-201ENST00000465035 409 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 ATP5EP1-201ENST00000510257 156 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 SNORA4.4-201ENST00000515921 135 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AC015712.3-201ENST00000559380 164 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AL117336.2-201ENST00000602435 335 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AC016727.2-201ENST00000603988 621 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AC005296.1-201ENST00000616145 209 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 AP006437.1-201ENST00000641440 3685 ntBASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRIM49D1C9J1S8 RNA5SP432-201ENST00000362480 116 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-1159P-201ENST00000362933 107 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-1188P-201ENST00000363795 107 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-1286P-201ENST00000383871 107 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-968P-201ENST00000384076 107 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 U8.10-201ENST00000384260 133 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-933P-201ENST00000384424 107 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 SNORA12.2-201ENST00000391040 156 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 SNORA75.4-201ENST00000391278 119 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 SNORA26.9-201ENST00000391322 122 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 CBX3P9-201ENST00000402326 552 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 AC074085.1-201ENST00000413598 418 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 EDDM3CP-201ENST00000415977 425 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 MRPS18CP6-201ENST00000423587 223 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 AC007677.1-201ENST00000445757 515 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 AC107399.1-201ENST00000451226 265 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 AC006026.2-201ENST00000457376 180 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 AL441985.1-201ENST00000457727 251 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 U8.21-201ENST00000459536 136 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 RPL23AP75-201ENST00000491601 451 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 AC104564.1-201ENST00000493028 407 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 AC022447.4-201ENST00000504053 364 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-559P-201ENST00000516151 98 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-250P-201ENST00000516958 103 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 UBL5P4-201ENST00000562584 236 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 VN1R107P-201ENST00000601784 209 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 AL133255.1-201ENST00000606374 441 ntBASIC1.59□□□□□ -2.15
TRIM49D1C9J1S8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms