Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MIR517B-201ENST00000385102 67 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 RNA5SP504-201ENST00000410676 117 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 AL590383.1-201ENST00000428602 75 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 AC130509.1-201ENST00000464158 433 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 AL442163.3-201ENST00000554110 156 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 AC015688.2-201ENST00000584523 262 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 AC091135.1-201ENST00000585943 307 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 AC131235.4-201ENST00000609288 620 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 AC093875.1-201ENST00000623688 504 ntBASIC-0.6□□□□□ -2.51
COL6A5A8TX70 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.6□□□□□ -2.51
COL6A5A8TX70 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 RNU4-56P-201ENST00000364700 142 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 RNU6-47P-201ENST00000383866 107 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 SNORD116-13-201ENST00000384408 92 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 AP003072.1-201ENST00000531740 145 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 AC100830.2-201ENST00000581636 240 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 AC131055.1-201ENST00000584626 316 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 AC136475.10-201ENST00000620253 385 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 SCARNA4-202ENST00000625402 129 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 MTND2P41-201ENST00000637599 773 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 ATM-228ENST00000639240 498 ntTSL 5 BASIC-0.61□□□□□ -2.51
COL6A5A8TX70 RNU6-23P-201ENST00000363283 107 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 SNORD32A-201ENST00000364805 84 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 RNU6-169P-201ENST00000365336 107 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 RNU6-741P-201ENST00000383889 107 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 RPS20P2-201ENST00000402520 389 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.61□□□□□ -2.51
COL6A5A8TX70 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.61□□□□□ -2.51
COL6A5A8TX70 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.61□□□□□ -2.51
COL6A5A8TX70 MIR3169-201ENST00000578032 83 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 AC025588.3-201ENST00000604182 274 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 AL357078.3-201ENST00000607528 618 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 uc_338.16-201ENST00000621804 95 ntBASIC-0.61□□□□□ -2.51
COL6A5A8TX70 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 PCNPP3-201ENST00000393579 471 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 RNU6-705P-201ENST00000410601 104 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 AC011233.1-201ENST00000422812 283 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 MTND2P5-201ENST00000432656 1006 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.62□□□□□ -2.51
COL6A5A8TX70 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.62□□□□□ -2.51
COL6A5A8TX70 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.62□□□□□ -2.51
COL6A5A8TX70 MTCYBP43-201ENST00000513621 740 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 RNU6-479P-201ENST00000516348 105 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-0.62□□□□□ -2.51
COL6A5A8TX70 AP003733.2-201ENST00000529409 171 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.62□□□□□ -2.51
COL6A5A8TX70 AC099786.3-201ENST00000565735 1410 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 RNA5SP517-201ENST00000364724 117 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 RNU6-431P-201ENST00000383874 107 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 RNU6-1226P-201ENST00000384317 107 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 AC016907.1-201ENST00000419483 435 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.62□□□□□ -2.51
COL6A5A8TX70 RPL32P14-201ENST00000463196 378 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 AC105417.1-201ENST00000514691 285 ntBASIC-0.62□□□□□ -2.51
COL6A5A8TX70 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.62□□□□□ -2.51
COL6A5A8TX70 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 RNU6-230P-201ENST00000362457 104 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 RNA5SP259-201ENST00000365541 109 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 SNAP23P1-201ENST00000433229 246 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 PCNPP5-201ENST00000452246 481 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 MTND1P3-201ENST00000484956 952 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 RNU6-91P-201ENST00000607774 107 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 AL355816.2-201ENST00000610049 647 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 AL163051.2-201ENST00000618976 735 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 MTND4P5-201ENST00000435821 1374 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 RNU6-194P-201ENST00000363862 105 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 MIR520A-201ENST00000384862 85 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 SNORD64-201ENST00000386683 67 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 RNU6-244P-201ENST00000391028 104 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-0.63□□□□□ -2.51
COL6A5A8TX70 NFU1P2-201ENST00000448700 469 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
COL6A5A8TX70 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.63□□□□□ -2.51
COL6A5A8TX70 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.63□□□□□ -2.51
COL6A5A8TX70 AC127455.1-201ENST00000565496 145 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 YWHAEP3-201ENST00000582767 121 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 AL136317.1-201ENST00000612653 226 ntBASIC-0.63□□□□□ -2.51
COL6A5A8TX70 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.64□□□□□ -2.51
COL6A5A8TX70 SNORD114-6-201ENST00000364393 72 ntBASIC-0.64□□□□□ -2.51
COL6A5A8TX70 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.64□□□□□ -2.51
COL6A5A8TX70 MIR889-201ENST00000401280 79 ntBASIC-0.64□□□□□ -2.51
COL6A5A8TX70 USP9YP13-201ENST00000417797 480 ntBASIC-0.64□□□□□ -2.51
COL6A5A8TX70 RPL36P19-201ENST00000430744 301 ntBASIC-0.64□□□□□ -2.51
COL6A5A8TX70 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-0.64□□□□□ -2.51
COL6A5A8TX70 RPL37P6-201ENST00000460682 294 ntBASIC-0.64□□□□□ -2.51
COL6A5A8TX70 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.64□□□□□ -2.51
COL6A5A8TX70 RNU4-49P-201ENST00000516080 140 ntBASIC-0.64□□□□□ -2.51
COL6A5A8TX70 AC104695.3-201ENST00000604052 296 ntBASIC-0.64□□□□□ -2.51
COL6A5A8TX70 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.64□□□□□ -2.51
COL6A5A8TX70 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.64□□□□□ -2.51
COL6A5A8TX70 MIR573-201ENST00000384964 99 ntBASIC-0.64□□□□□ -2.51
COL6A5A8TX70 MIR181B2-201ENST00000385004 89 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms